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Abstract Understanding the genetic and fitness consequences of anthropogenic bottlenecks is crucial for biodiversity conservation. However, studies of bottlenecked populations combining genomic approaches with fitness data are rare. Theory predicts that severe bottlenecks deplete genetic diversity, exacerbate inbreeding depression and decrease population viability. However, actual outcomes are complex and depend on how a species’ unique demography affects its genetic load. We used population genetic and veterinary pathology data, demographic modelling, whole-genome resequencing and forward genetic simulations to investigate the genomic and fitness consequences of a near-extinction event in the northern elephant seal. We found no evidence of inbreeding depression within the contemporary population for key fitness components, including body mass, blubber thickness and susceptibility to parasites and disease. However, we detected a genomic signature of a recent extreme bottleneck (effective population size = 6; 95% confidence interval = 5.0–7.5) that will have purged much of the genetic load, potentially leading to the lack of observed inbreeding depression in our study. Our results further suggest that deleterious genetic variation strongly impacted the post-bottleneck population dynamics of the northern elephant seal. Our study provides comprehensive empirical insights into the intricate dynamics underlying species-specific responses to anthropogenic bottlenecks. 

Mercury (Hg) pollutes marine ecosystems and accumulates in benthic species. This ecological case study investigated the temporal accumulation of Hg in American lobster (Homarus americanus; H. Milne Edwards, 1837) from coastal Maine (Casco Bay, ME, USA). We analyzed total Hg levels in legal-sized lobsters (carapace length: 8.255–12.5 cm; n = 34) collected during the early (May–July 1) or late (July 15–October) recreational harvest seasons. Morphometric data show that body size correlates with body weight (R2 = 0.76; p < 0.001), and average body sizes were similar in early and late seasons. The average chelipod size was ~7% larger in male lobsters (p < 0.02), reflecting sexual dimorphism. Hg levels in select tissues from boiled lobsters were analyzed using atomic absorption spectroscopy. Hg in ambient water was undetectable, indicating that Hg in tissues reflects bioaccumulation. Hg content correlated with the lengths (cm) and weights (g) of cephalothorax, carapace, chelipod, and hepatopancreas in both male and female lobsters. Total Hg levels in most tissues were within safe and acceptable limits for human consumption (<0.2 ppm). Compared to late-season lobsters, early-season lobsters had significantly higher Hg levels in tail (~55% increase; 0.130 ppm vs. 0.084 ppm; p < 0.05) and hepatopancreas tissues (~29% increase; 0.099 ppm vs. 0.077 ppm; p < 0.05), suggesting that seasonal factors influence Hg content (e.g., spring river runoff, lobster migration, inert biological cycles). Observed seasonal fluctuations in lobster Hg levels may inform future strategies for mitigating pollution in coastal marine ecosystems. 

MicroRNAs (miRNAs) are epigenetic markers with a key role in post-transcriptional gene regulation. Several studies have described the dysregulation of miRNAs in temperature and hypoxic stress responses of marine organisms, but their role in the response to acidification conditions has remained relatively underexplored. We investigated the differential expression of miRNAs in whole brain tissue of Arctic cod (Boregogadussaida) exposed to elevated aqueous CO₂levels representative of future climate change predictions. We detected the expression of 17 miRNAs of interest that are either directly or indirectly associated with reduced auditory performance; 12 of the 17 miRNAs showed significant differential expression in high treatment vs. low (control) aqueous CO₂conditions. Target gene predictions indicated that these miRNAs are likely involved with inner ear maintenance, hair cell degradation, age-related hearing loss, neural inflammation, and injury. The highest differential expression was observed in mir-135b, which is linked with increased neural inflammation and injury that may be associated with neurosensory dysfunction. Collectively, these results elucidate the contributions of miRNA mechanisms underlying CO₂-induced sensory deficits in fishes facing abiotic environmental change and suggest strong potential for this approach to yield novel insights into the mechanistic effects of climate change on marine organisms.