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Abstract PurposeThe aim of this work is to develop a method to solve the ill‐posed inverse problem of accelerated image reconstruction while correcting forward model imperfections in the context of subject motion during MRI examinations. MethodsThe proposed solution uses a Bayesian framework based on deep generative diffusion models to jointly estimate a motion‐free image and rigid motion estimates from subsampled and motion‐corrupt two‐dimensional (2D) k‐space data. ResultsWe demonstrate the ability to reconstruct motion‐free images from accelerated two‐dimensional (2D) Cartesian and non‐Cartesian scans without any external reference signal. We show that our method improves over existing correction techniques on both simulated and prospectively accelerated data. ConclusionWe propose a flexible framework for retrospective motion correction of accelerated MRI based on deep generative diffusion models, with potential application to other forward model corruptions.more » « lessFree, publicly-accessible full text available April 30, 2025
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Abstract ObjectivesSuicide presents a major public health challenge worldwide, affecting people across the lifespan. While previous studies revealed strong associations between Social Determinants of Health (SDoH) and suicide deaths, existing evidence is limited by the reliance on structured data. To resolve this, we aim to adapt a suicide-specific SDoH ontology (Suicide-SDoHO) and use natural language processing (NLP) to effectively identify individual-level SDoH-related social risks from death investigation narratives. Materials and MethodsWe used the latest National Violent Death Report System (NVDRS), which contains 267 804 victim suicide data from 2003 to 2019. After adapting the Suicide-SDoHO, we developed a transformer-based model to identify SDoH-related circumstances and crises in death investigation narratives. We applied our model retrospectively to annotate narratives whose crisis variables were not coded in NVDRS. The crisis rates were calculated as the percentage of the group’s total suicide population with the crisis present. ResultsThe Suicide-SDoHO contains 57 fine-grained circumstances in a hierarchical structure. Our classifier achieves AUCs of 0.966 and 0.942 for classifying circumstances and crises, respectively. Through the crisis trend analysis, we observed that not everyone is equally affected by SDoH-related social risks. For the economic stability crisis, our result showed a significant increase in crisis rate in 2007–2009, parallel with the Great Recession. ConclusionsThis is the first study curating a Suicide-SDoHO using death investigation narratives. We showcased that our model can effectively classify SDoH-related social risks through NLP approaches. We hope our study will facilitate the understanding of suicide crises and inform effective prevention strategies.more » « less
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Abstract The Institute for Foundations of Machine Learning (IFML) focuses on core foundational tools to power the next generation of machine learning models. Its research underpins the algorithms and data sets that make generative artificial intelligence (AI) more accurate and reliable. Headquartered at The University of Texas at Austin, IFML researchers collaborate across an ecosystem that spans University of Washington, Stanford, UCLA, Microsoft Research, the Santa Fe Institute, and Wichita State University. Over the past year, we have witnessed incredible breakthroughs in AI on topics that are at the heart of IFML's agenda, such as foundation models, LLMs, fine‐tuning, and diffusion with game‐changing applications influencing almost every area of science and technology. In this article, we seek to highlight seek to highlight the application of foundational machine learning research on key use‐inspired topics:Fairness in Imaging with Deep Learning: designing the correct metrics and algorithms to make deep networks less biased.Deep proteins: using foundational machine learning techniques to advance protein engineering and launch a biomanufacturing revolution.Sounds and Space for Audio‐Visual Learning: building agents capable of audio‐visual navigation in complex 3D environments via new data augmentations.Improving Speed and Robustness of Magnetic Resonance Imaging: using deep learning algorithms to develop fast and robust MRI methods for clinical diagnostic imaging.IFML is also responding to explosive industry demand for an AI‐capable workforce. We have launched an accessible, affordable, and scalable new degree program—the MSAI—that looks to wholly reshape the AI/ML workforce pipeline.more » « less
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Abstract Deep learning has become a popular tool for computer-aided diagnosis using medical images, sometimes matching or exceeding the performance of clinicians. However, these models can also reflect and amplify human bias, potentially resulting inaccurate missed diagnoses. Despite this concern, the problem of improving model fairness in medical image classification by deep learning has yet to be fully studied. To address this issue, we propose an algorithm that leverages the marginal pairwise equal opportunity to reduce bias in medical image classification. Our evaluations across four tasks using four independent large-scale cohorts demonstrate that our proposed algorithm not only improves fairness in individual and intersectional subgroups but also maintains overall performance. Specifically, the relative change in pairwise fairness difference between our proposed model and the baseline model was reduced by over 35%, while the relative change in AUC value was typically within 1%. By reducing the bias generated by deep learning models, our proposed approach can potentially alleviate concerns about the fairness and reliability of image-based computer-aided diagnosis.more » « less
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Under Review for COLT 2024 (Ed.)In the well-studied agnostic model of learning, the goal of a learner– given examples from an arbitrary joint distribution on Rd ⇥ {±1}– is to output a hypothesis that is competitive (to within ✏) of the best fitting concept from some class. In order to escape strong hardness results for learning even simple concept classes in this model, we introduce a smoothed analysis framework where we require a learner to compete only with the best classifier that is robust to small random Gaussian perturbation. This subtle change allows us to give a wide array of learning results for any concept that (1) depends on a low-dimensional subspace (aka multi-index model) and (2) has a bounded Gaussian surface area. This class includes functions of halfspaces and (low-dimensional) convex sets, cases that are only known to be learnable in non-smoothed settings with respect to highly structured distributions such as Gaussians. Perhaps surprisingly, our analysis also yields new results for traditional non-smoothed frame- works such as learning with margin. In particular, we obtain the first algorithm for agnostically learning intersections of k-halfspaces in time kpoly( log k ✏ ) where is the margin parameter. Before our work, the best-known runtime was exponential in k (Arriaga and Vempala, 1999a).more » « lessFree, publicly-accessible full text available June 30, 2025
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Free, publicly-accessible full text available June 1, 2025
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Free, publicly-accessible full text available April 25, 2025