skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Search for: All records

Award ID contains: 2344476

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Abstract This review paper comprehensively analyzes recent advancements in optical fiber‐based biosensors, focusing on conventional fiber and photonic crystal structures. This paper overviews the significant applications of optical fiber biosensors, including bioimaging, quality analysis, food safety, and field environment monitoring, setting the stage for subsequent discussions. The primary objective of the review is to systematically evaluate recent literature concerning optical fiber‐based biosensors, emphasizing their sensitivities and resolutions. The second section explores integrating plasmonic materials such as graphene, TDMC, germanium, black phosphorus, and silicon within optical fiber biosensors, elucidating their roles in enhancing sensitivity and resolution in biosensing applications. A detailed examination of photonic crystal fibers (PCF) follows, categorizing them into internally and externally metal film‐coated biosensors, highlighting their distinct advantages and limitations. Comparative analyses in two tables delineate the performance and sensitivity of optical fiber‐based biosensors, mainly focusing on different coating strategies. The final section of the review discusses emerging trends and applications in optical fiber biosensing technologies, underscoring their potential to transform biomedical and environmental monitoring fields. By synthesizing recent developments and challenges, this review aims to offer researchers and practitioners a comprehensive understanding of optical fiber‐based biosensors, facilitating informed decision‐making and driving further advancements in the field. 
    more » « less
  2. This research introduces an advanced approach to automate the segmentation and quantification of nuclei in fluorescent images through deep learning techniques. Overcoming inherent challenges such as variations in pixel intensities, noisy boundaries, and overlapping edges, our devised pipeline integrates the U-Net architecture with state-of-the-art CNN models, such as EfficientNet. This fusion maintains the efficiency of U-Net while harnessing the superior capabilities of EfficientNet. Crucially, we exclusively utilize high-quality confocal images generated in-house for model training, purposefully avoiding the pitfalls associated with publicly available synthetic data of lower quality. Our training dataset encompasses over 3000 nuclei boundaries, which are meticulously annotated manually to ensure precision and accuracy in the learning process. Additionally, post-processing is implemented to refine segmentation results, providing morphological quantification for each segmented nucleus. Through comprehensive evaluation, our model achieves notable performance metrics, attaining an F1-score of 87% and an Intersection over Union (IoU) value of 80%. Furthermore, its robustness is demonstrated across diverse datasets sourced from various origins, indicative of its broad applicability in automating nucleus extraction and quantification from fluorescent images. This innovative methodology holds significant promise for advancing research efforts across multiple domains by facilitating a deeper understanding of underlying biological processes through automated analysis of fluorescent imagery. 
    more » « less