To address the taxonomic uncertainty of Sporolithon species named in the early to mid-20th century, targeted PCR sequencing was performed on eight historical type specimens and on recently collected specimens. Six type specimens amplified for the rbcL gene and were Sanger sequenced yielding sequences ranging in length from 118 to 280 base pairs (bp). One, S. australasicum, failed to amplify and another, S. howei, was amplified for the psbA gene yielding a sequence 544 bp in length. The 118 bp long rbcL sequence of the lectotype of S. crassiramosum showed that it is a later, heterotypic synonym of S. molle. The rbcL sequences of type specimens of S. episoredion, S. schmidtii, S. sibogae and S. timorense ranged from 118 to 228 bp, and each is a distinct species. The 544 bp long psbA sequence of S. howei is also unique. The 280 bp long rbcL sequence of the lectotype of S. durum did not match any sequence with that name in any public repository, including the previously published complete plastome and mitogenome sequences. However, it was identical in sequence to a specimen in GenBank from the southern coast of Western Australia as well as several other sequences generated from field-collected specimens from the states of South Australia and Western Australia. The rhodolith specimens from New Zealand previously called S. durum are S. nodosum sp. nov. The species is endemic to New Zealand. The epilithic specimens from New Zealand previously called S. durum are S. immotum sp. nov., which is also found along the southeastern coast of Australia. Sporolithon crypticum sp. nov. is described from the southern coast of Western Australia. RAxML and Bayesian phylogenetic analyses of Sporolithon psbA and rbcL sequences are congruent between the two plastid encoded genes. DNA sequencing of type specimens of species of corallines is demonstrated to be the only reliable method to correctly apply names.
more »
« less
Sporolithon sinusmexicanum sp. nov. (Sporolithales, Rhodophyta): a new rhodolith-forming species from deepwater rhodolith beds in the Gulf of Mexico
Sporolithon is a non-geniculate, marine taxon that occurs in tropical to subtropical and warm temperate habitats worldwide. On the basis of specimens collected from offshore Louisiana and Florida in the Gulf of Mexico, Sporolithon sinusmexicanum sp. nov. is described. rbcL and psbA sequence analyses showed that S. sinusmexicanum is closely related to Sporolithon yoneshigueae (type locality: Bahia, Brazil). These two species can be distinguished by the number of rosette cells (10–12 in S. sinusmexicanum vs. 19–24 in S. yoneshigueae) and by the habit of the tetrasporangial structures after spore release (sloughed off in S. sinusmexicanum vs. overgrown and buried in Sporolithon yoneshigueae).
more »
« less
- Award ID(s):
- 1754504
- PAR ID:
- 10058254
- Date Published:
- Journal Name:
- Phytotaxa
- Volume:
- 350
- Issue:
- 2
- ISSN:
- 1179-3163
- Page Range / eLocation ID:
- 135 - 146
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
DNA sequence analysis of plastid-encoded psbA and rbcL loci, and nuclear-encoded LSU rDNA of rhodolith-forming specimens of Sporolithales from Brazil and the northwestern Gulf of Mexico reveal that they belong to an unnamed species of Sporolithon (Sporolithaceae). Sporolithon amadoi sp. nov. is morpho-anatomically characterized by a vegetative thallus reaching more than 20 cell layers, a tetrasporophyte with tetrasporangial sori slightly raised above the thallus surface that become overgrown and buried after spore release, and by cruciately divided tetrasporangia with pores surrounded by 9–13 rosette cells. Since these morpho-anatomical features are shared with some other Sporolithon species, identification of this species can only be confirmed by DNA sequences.more » « less
-
A coralline rhodolith was collected from a depth of 178 m, the lower end of the mesophotic zone, on Plantagenet Bank offshore of Bermuda by the submersible Nomad using a mechanical armature. DNA sequence comparisons of the plastid encoded psbA and rbcL loci of this specimen to Sporolithales from the tropical western Atlantic and worldwide revealed it to be an unnamed species of Sporolithon. Sporolithon mesophoticum sp. nov. possesses tetrasporangial sori flush to slightly raised above the thallus surface and has uniquely flattened perithallial and meristematic cells. Thus far, the new species is the deepest known living marine macroalga that has been sequenced and placed into a phylogenetic context.more » « less
-
Abstract P‐to‐S‐converted waves observed in controlled‐source multicomponent ocean bottom seismometer (OBS) records were used to derive theVp/Vsstructure of Cascadia Basin sediments. We usedP‐to‐Swaves converted at the basement to derive an empirical function describing the averageVp/Vsof Cascadia sediments as a function of sediment thickness. We derived one‐dimensional intervalVp/Vsfunctions from semblance velocity analysis ofS‐converted intrasediment and basement reflections, which we used to define an empiricalVp/Vsversus burial depth compaction trend. We find that seaward from the Cascadia deformation front,Vp/Vsstructure offshore northern Oregon and Washington shows little variability along strike, while the structure of incoming sediments offshore central Oregon is more heterogeneous and includes intermediate‐to‐deep sediment layers of anomalously elevatedVp/Vs. These zones with elevatedVp/Vsare likely due to elevated pore fluid pressures, although layers of high sand content intercalated within a more clayey sedimentary sequence, and/or a higher content of coarser‐grained clay minerals relative to finer‐grained smectite could be contributing factors. We find that the proto‐décollement offshore central Oregon develops within the incoming sediments at a low‐permeability boundary that traps fluids in a stratigraphic level where fluid overpressure exceeds 50% of the differential pressure between the hydrostatic pressure and the lithostatic pressure. Incoming sediments with the highest estimated fluid overpressures occur offshore central Oregon where deformation of the accretionary prism is seaward vergent. Conversely, landward vergence offshore northern Oregon and Washington correlates with more moderate pore pressures and laterally homogeneousVp/Vsfunctions of Cascadia Basin sediments.more » « less
-
Abstract We use Eikonal tomography to derive phase and group velocities of surface waves for the plate boundary region in Southern California. Seismic noise data in the period range 2 and 20 s recorded in year 2014 by 346 stations with ~1‐ to 30‐km station spacing are analyzed. Rayleigh and Love wave phase travel times are measured using vertical‐vertical and transverse‐transverse noise cross correlations, and group travel times are derived from the phase measurements. Using the Eikonal equation for each location and period, isotropic phase and group velocities and 2‐psi azimuthal anisotropy are determined statistically with measurements from different virtual sources. Starting with the SCEC Community Velocity Model, the observed 2.5‐ to 16‐s isotropic phase and group dispersion curves are jointly inverted on a 0.05° × 0.05° grid to obtain local 1‐D piecewise shear wave velocity (Vs) models. Compared to the starting model, the final results have generally lowerVsin the shallow crust (top 3–10 km), particularly in areas such as basins and fault zones. The results also show clear velocity contrasts across the San Andreas, San Jacinto, Elsinore, and Garlock Faults and suggest that the San Andreas Fault southeast of San Gorgonio Pass is dipping to the northeast. Investigation of the nonuniqueness of the 1‐DVsinversion suggests that imaging the top 3‐kmVsstructure requires either shorter period (≤2 s) surface wave dispersion measurements or other types of data set such as Rayleigh wave ellipticity.more » « less