skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: Asia Pacific Sporolithon (Corallinophycidae, Rhodophyta) species revised based on DNA sequencing of type specimens and including S. crypticum sp. nov., S. immotum sp. nov . and S. nodosum sp. nov.
To address the taxonomic uncertainty of Sporolithon species named in the early to mid-20th century, targeted PCR sequencing was performed on eight historical type specimens and on recently collected specimens. Six type specimens amplified for the rbcL gene and were Sanger sequenced yielding sequences ranging in length from 118 to 280 base pairs (bp). One, S. australasicum, failed to amplify and another, S. howei, was amplified for the psbA gene yielding a sequence 544 bp in length. The 118 bp long rbcL sequence of the lectotype of S. crassiramosum showed that it is a later, heterotypic synonym of S. molle. The rbcL sequences of type specimens of S. episoredion, S. schmidtii, S. sibogae and S. timorense ranged from 118 to 228 bp, and each is a distinct species. The 544 bp long psbA sequence of S. howei is also unique. The 280 bp long rbcL sequence of the lectotype of S. durum did not match any sequence with that name in any public repository, including the previously published complete plastome and mitogenome sequences. However, it was identical in sequence to a specimen in GenBank from the southern coast of Western Australia as well as several other sequences generated from field-collected specimens from the states of South Australia and Western Australia. The rhodolith specimens from New Zealand previously called S. durum are S. nodosum sp. nov. The species is endemic to New Zealand. The epilithic specimens from New Zealand previously called S. durum are S. immotum sp. nov., which is also found along the southeastern coast of Australia. Sporolithon crypticum sp. nov. is described from the southern coast of Western Australia. RAxML and Bayesian phylogenetic analyses of Sporolithon psbA and rbcL sequences are congruent between the two plastid encoded genes. DNA sequencing of type specimens of species of corallines is demonstrated to be the only reliable method to correctly apply names.  more » « less
Award ID(s):
1754504
PAR ID:
10503722
Author(s) / Creator(s):
; ; ; ; ; ; ;
Publisher / Repository:
Phycologia
Date Published:
Journal Name:
Phycologia
Volume:
62
Issue:
6
ISSN:
0031-8884
Page Range / eLocation ID:
593 to 607
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Sporolithon is a non-geniculate, marine taxon that occurs in tropical to subtropical and warm temperate habitats worldwide. On the basis of specimens collected from offshore Louisiana and Florida in the Gulf of Mexico, Sporolithon sinusmexicanum sp. nov. is described. rbcL and psbA sequence analyses showed that S. sinusmexicanum is closely related to Sporolithon yoneshigueae (type locality: Bahia, Brazil). These two species can be distinguished by the number of rosette cells (10–12 in S. sinusmexicanum vs. 19–24 in S. yoneshigueae) and by the habit of the tetrasporangial structures after spore release (sloughed off in S. sinusmexicanum vs. overgrown and buried in Sporolithon yoneshigueae). 
    more » « less
  2. DNA sequence analysis of plastid-encoded psbA and rbcL loci, and nuclear-encoded LSU rDNA of rhodolith-forming specimens of Sporolithales from Brazil and the northwestern Gulf of Mexico reveal that they belong to an unnamed species of Sporolithon (Sporolithaceae). Sporolithon amadoi sp. nov. is morpho-anatomically characterized by a vegetative thallus reaching more than 20 cell layers, a tetrasporophyte with tetrasporangial sori slightly raised above the thallus surface that become overgrown and buried after spore release, and by cruciately divided tetrasporangia with pores surrounded by 9–13 rosette cells. Since these morpho-anatomical features are shared with some other Sporolithon species, identification of this species can only be confirmed by DNA sequences. 
    more » « less
  3. A coralline rhodolith was collected from a depth of 178 m, the lower end of the mesophotic zone, on Plantagenet Bank offshore of Bermuda by the submersible Nomad using a mechanical armature. DNA sequence comparisons of the plastid encoded psbA and rbcL loci of this specimen to Sporolithales from the tropical western Atlantic and worldwide revealed it to be an unnamed species of Sporolithon. Sporolithon mesophoticum sp. nov. possesses tetrasporangial sori flush to slightly raised above the thallus surface and has uniquely flattened perithallial and meristematic cells. Thus far, the new species is the deepest known living marine macroalga that has been sequenced and placed into a phylogenetic context. 
    more » « less
  4. null (Ed.)
    Haraldiophyllum hawaiiense sp. nov. is described as a new mesophotic alga and a new genus record for the Hawaiian Islands. Six specimens were collected at a depth range of 81-93 m from Papahānaumokuākea Marine National Monument, and their morphology investigated, as well as molecular phylogenetic analyses of the plastidial ribulose-1,5- bisphosphate carboxylase–oxygenase large-subunit (rbcL) gene and a concatenated alignment of rbcL and nuclear large-subunit rRNA gene (LSU) sequences. Phylogenetic analyses supported H. hawaiiense sp. nov. as a distinct lineage within the genus Haraldiophyllum, and sister to a large clade containing the type species, H. bonnemaisonii, as well as H. crispatum and an undescribed European specimen. The six Hawaiian specimens were shown to be identical, but unique among other species of the genus as well as the recently segregated genus Neoharaldiophyllum, which comprises half of the species previously included in Haraldiophyllum. The vegetative morphology of H. hawaiiense sp. nov. resembles Neoharaldiophyllum udoense (formerly H. udoensis); however, no female or post-fertilization structures were found in the Hawaiian specimens to allow a more comprehensive comparison. The molecular phylogenies demonstrate that Haraldiophyllum is paraphyletic, suggesting either that the Myriogrammeae tribe includes undescribed genera, including Haraldiophyllum sensu stricto, or that Neoharaldiophyllum species should be transferred into the genus Haraldiophyllum. However, based on vegetative morphology and molecular analyses, and pending resolution of this taxonomic issue, the Hawaiian specimens are placed within the genus Haraldiophyllum. This new record for the Hawaiian Islands highlights the novel biodiversity from mesophotic depths, reaffirming the need for further investigation into the biodiversity of Mesophotic Coral Ecosystems. 
    more » « less
  5. Surveys of Hawaiian macroalgae over the past 15 years have yielded numerous specimens representing species new to science. Calliblepharis yasutakei sp. nov. is here described based on a plant collected at a depth of 98 m from Kapou, Papahânaumokuâkea Marine National Monument, Hawaiʻi. Phylogenetic analyses of three molecular markers (COI, rbcL, and SSU) and analyses of morphological features were used to describe the new species in the family Cystocloniaceae. Calliblepharis yasutakei sp. nov. grouped with C. fimbriata, C. rammediorum, C. occidentalis and C. jolyi in a clade with full support for the rbcL analysis, representing a distinct lineage within the genus. Phylogenetic and vegetative morphological comparisons demonstrated that the new Hawaiian species is most closely related to C. rammediorum from Israel (rbcL similarity of 96.3%), although no female reproductive structures were found to allow a more comprehensive comparison. In order to determine whether C. yasutakei represents the first confirmed report of the genus Calliblepharis in the Hawaiian Islands, phylogenetic and morphological analysis of the Hawaiian Hypnea saidana (=Calliblepharis saidana) specimen accessioned at the Bernice P. Bishop Museum was performed. These analyses demonstrated that this specimen belongs to a new species in the genus Hypnea, which is here described as H. tsudae sp. nov. C. yasutakei, in addition to being a new species, is also reported as the first confirmed record of the genus Calliblepharis in the Hawaiian archipelago, and the description of H. tsudae brings the number of species for this genus in Hawaiʻi to eight. 
    more » « less