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Title: Big data and smart-connected epidemiology in practice: the value for prevention and control of infectious diseases
Livestock industry is daily producing large amounts of multi-scale data (pathogen-, animal-, site-, system-, regional- level) from different sources such as diagnostic laboratories, trade and production records, management and environmental monitoring systems; however, all these data are still presented and used separately and are largely infra-utilized to timely (i.e., near real-time) inform livestock health decisions. Recent advances in the automation of data capture, standardization, multi-scale integration and sharing/communication (i.e. The Internet Of Things) as well as in the development of novel data mining analytical and visualization capabilities specifically adapted to the livestock industry are dramatically changing this paradigm. As a result, we expect vertical advances in the way we prevent and manage livestock diseases both locally and globally. Our team at the Center for Animal Disease Modeling and Surveillance (CADMS), in collaboration with researchers at Iowa State University and industry leaders at Boehringer Ingelheim and GlobalVetLINK have been working in an exceptional research-industry partnership to develop key data connections and novel Big Data capabilities within the Disease BioPortal (http://bioportal.ucdavis.edu/). This web-based platform includes automation of diagnostic interpretations and facilitates the combined analysis of health, production and trade data using novel space-time-genomic visualization and data mining tools. Access to confidential databases is individually granted with different levels of secure access, visualization and editing capabilities for participating producers, labs, veterinarians and other stakeholders. Each user can create and share customized dashboards and reports to inform risk-based, more cost-effective, decisions at site, system or regional level. Here we will provide practical examples of applications in the swine, poultry and aquaculture industries. We hope to contribute to the more coordinated and effective prevention and control of infectious diseases locally and globally.  more » « less
Award ID(s):
1838207
NSF-PAR ID:
10128229
Author(s) / Creator(s):
Date Published:
Journal Name:
99th Conference of Research Workers in Animal Diseases
Page Range / eLocation ID:
140
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
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