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1. Deep reinforcement learning for shared control of mobile robots

   https://doi.org/10.1049/csy2.12036  

   Tian, Chong ; Shaik, Shahil ; Wang, Yue ( December 2021 , IET Cyber-Systems and Robotics)

   Shared control of mobile robots integrates manual input with auxiliary autonomous controllers to improve the overall system performance. However, prior work that seeks to find the optimal shared control ratio needs an accurate human model, which is usually challenging to obtain. In this study, the authors develop an extended Twin Delayed Deep Deterministic Policy Gradient (DDPG) (TD3X)‐based shared control framework that learns to assist a human operator in teleoperating mobile robots optimally. The robot's states, shared control ratio in the previous time step, and human's control input is used as inputs to the reinforcement learning (RL) agent, which then outputs the optimal shared control ratio between human input and autonomous controllers without knowing the human model. Noisy softmax policies are developed to make the TD3X algorithm feasible under the constraint of a shared control ratio. Furthermore, to accelerate the training process and protect the robot, a navigation demonstration policy and a safety guard are developed. A neural network (NN) structure is developed to maintain the correlation of sensor readings among heterogeneous input data and improve the learning speed. In addition, an extended DAGGER (DAGGERX) human agent is developed for training the RL agent to reduce human workload. Robot simulations and experiments with humans in the loop are conducted. The results show that the DAGGERX human agent can simulate real human inputs in the worst‐case scenarios with a mean square error of 0.0039. Compared to the original TD3 agent, the TD3X‐based shared control system decreased the average collision number from 387.3 to 44.4 in a simplistic environment and 394.2 to 171.2 in a more complex environment. The maximum average return increased from 1043 to 1187 with a faster converge speed in the simplistic environment, while the performance is equally good in the complex environment because of the use of an advanced human agent. In the human subject tests, participants' average perceived workload was significantly lower in shared control than that in exclusively manual control (26.90 vs. 40.07,p = 0.013).

    

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2. SwarmShare: Mobility-Resilient Spectrum Sharing for Swarm UAV Networking in the 6 GHz Band

   https://doi.org/10.1109/SECON52354.2021.9491602  

   Hu, Jiangqi ; Moorthy, Sabarish Krishna ; Harindranath, Ankush ; Guan, Zhangyu ; Mastronarde, Nicholas ; Bentley, Elizabeth Serena ; Pudlewski, Scott ( July 2021 , 2021 18th Annual IEEE International Conference on Sensing, Communication, and Networking (SECON))

   null (Ed.)

   To mitigate the long-term spectrum crunch problem, the FCC recently opened up the 6 GHz frequency band for unlicensed use. However, the existing spectrum sharing strategies cannot support the operation of access points in moving vehicles such as cars and UAVs. This is primarily because of the directionality-based spectrum sharing among the incumbent systems in this band and the high mobility of the moving vehicles, which together make it challenging to control the cross-system interference. In this paper we propose SwarmShare, a mobility-resilient spectrum sharing framework for swarm UAV networking in the 6 GHz band. We first present a mathematical formulation of the SwarmShare problem, where the objective is to maximize the spectral efficiency of the UAV network by jointly controlling the flight and transmission power of the UAVs and their association with the ground users, under the interference constraints of the incumbent system. We find that there are no closed-form mathematical models that can be used characterize the statistical behaviors of the aggregate interference from the UAVs to the incumbent system. Then we propose a data-driven three-phase spectrum sharing approach, including Initial Power Enforcement, Offline-dataset Guided Online Power Adaptation, and Reinforcement Learning-based UAV Optimization. We validate the effectiveness of SwarmShare through an extensive simulation campaign. Results indicate that, based on SwarmShare, the aggregate interference from the UAVs to the incumbent system can be effectively controlled below the target level without requiring the real-time cross-system channel state information. The mobility resilience of SwarmShare is also validated in coexisting networks with no precise UAV location information. 

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3. The Temple University Digital Pathology Corpus: The Breast Tissue Subset

   https://doi.org/10.1109/SPMB52430.2021.9672275  

   Wevodau, Z. ; Doshna, B. ; Jhala, N. ; Akhtar, I. ; Obeid, I. ; Picone, J. ( December 2021 , Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB))

   Obeid, I. (Ed.)

   The Neural Engineering Data Consortium (NEDC) is developing the Temple University Digital Pathology Corpus (TUDP), an open source database of high-resolution images from scanned pathology samples [1], as part of its National Science Foundation-funded Major Research Instrumentation grant titled “MRI: High Performance Digital Pathology Using Big Data and Machine Learning” [2]. The long-term goal of this project is to release one million images. We have currently scanned over 100,000 images and are in the process of annotating breast tissue data for our first official corpus release, v1.0.0. This release contains 3,505 annotated images of breast tissue including 74 patients with cancerous diagnoses (out of a total of 296 patients). In this poster, we will present an analysis of this corpus and discuss the challenges we have faced in efficiently producing high quality annotations of breast tissue. It is well known that state of the art algorithms in machine learning require vast amounts of data. Fields such as speech recognition [3], image recognition [4] and text processing [5] are able to deliver impressive performance with complex deep learning models because they have developed large corpora to support training of extremely high-dimensional models (e.g., billions of parameters). Other fields that do not have access to such data resources must rely on techniques in which existing models can be adapted to new datasets [6]. A preliminary version of this breast corpus release was tested in a pilot study using a baseline machine learning system, ResNet18 [7], that leverages several open-source Python tools. The pilot corpus was divided into three sets: train, development, and evaluation. Portions of these slides were manually annotated [1] using the nine labels in Table 1 [8] to identify five to ten examples of pathological features on each slide. Not every pathological feature is annotated, meaning excluded areas can include focuses particular to these labels that are not used for training. A summary of the number of patches within each label is given in Table 2. To maintain a balanced training set, 1,000 patches of each label were used to train the machine learning model. Throughout all sets, only annotated patches were involved in model development. The performance of this model in identifying all the patches in the evaluation set can be seen in the confusion matrix of classification accuracy in Table 3. The highest performing labels were background, 97% correct identification, and artifact, 76% correct identification. A correlation exists between labels with more than 6,000 development patches and accurate performance on the evaluation set. Additionally, these results indicated a need to further refine the annotation of invasive ductal carcinoma (“indc”), inflammation (“infl”), nonneoplastic features (“nneo”), normal (“norm”) and suspicious (“susp”). This pilot experiment motivated changes to the corpus that will be discussed in detail in this poster presentation. To increase the accuracy of the machine learning model, we modified how we addressed underperforming labels. One common source of error arose with how non-background labels were converted into patches. Large areas of background within other labels were isolated within a patch resulting in connective tissue misrepresenting a non-background label. In response, the annotation overlay margins were revised to exclude benign connective tissue in non-background labels. Corresponding patient reports and supporting immunohistochemical stains further guided annotation reviews. The microscopic diagnoses given by the primary pathologist in these reports detail the pathological findings within each tissue site, but not within each specific slide. The microscopic diagnoses informed revisions specifically targeting annotated regions classified as cancerous, ensuring that the labels “indc” and “dcis” were used only in situations where a micropathologist diagnosed it as such. Further differentiation of cancerous and precancerous labels, as well as the location of their focus on a slide, could be accomplished with supplemental immunohistochemically (IHC) stained slides. When distinguishing whether a focus is a nonneoplastic feature versus a cancerous growth, pathologists employ antigen targeting stains to the tissue in question to confirm the diagnosis. For example, a nonneoplastic feature of usual ductal hyperplasia will display diffuse staining for cytokeratin 5 (CK5) and no diffuse staining for estrogen receptor (ER), while a cancerous growth of ductal carcinoma in situ will have negative or focally positive staining for CK5 and diffuse staining for ER [9]. Many tissue samples contain cancerous and non-cancerous features with morphological overlaps that cause variability between annotators. The informative fields IHC slides provide could play an integral role in machine model pathology diagnostics. Following the revisions made on all the annotations, a second experiment was run using ResNet18. Compared to the pilot study, an increase of model prediction accuracy was seen for the labels indc, infl, nneo, norm, and null. This increase is correlated with an increase in annotated area and annotation accuracy. Model performance in identifying the suspicious label decreased by 25% due to the decrease of 57% in the total annotated area described by this label. A summary of the model performance is given in Table 4, which shows the new prediction accuracy and the absolute change in error rate compared to Table 3. The breast tissue subset we are developing includes 3,505 annotated breast pathology slides from 296 patients. The average size of a scanned SVS file is 363 MB. The annotations are stored in an XML format. A CSV version of the annotation file is also available which provides a flat, or simple, annotation that is easy for machine learning researchers to access and interface to their systems. Each patient is identified by an anonymized medical reference number. Within each patient’s directory, one or more sessions are identified, also anonymized to the first of the month in which the sample was taken. These sessions are broken into groupings of tissue taken on that date (in this case, breast tissue). A deidentified patient report stored as a flat text file is also available. Within these slides there are a total of 16,971 total annotated regions with an average of 4.84 annotations per slide. Among those annotations, 8,035 are non-cancerous (normal, background, null, and artifact,) 6,222 are carcinogenic signs (inflammation, nonneoplastic and suspicious,) and 2,714 are cancerous labels (ductal carcinoma in situ and invasive ductal carcinoma in situ.) The individual patients are split up into three sets: train, development, and evaluation. Of the 74 cancerous patients, 20 were allotted for both the development and evaluation sets, while the remain 34 were allotted for train. The remaining 222 patients were split up to preserve the overall distribution of labels within the corpus. This was done in hope of creating control sets for comparable studies. Overall, the development and evaluation sets each have 80 patients, while the training set has 136 patients. In a related component of this project, slides from the Fox Chase Cancer Center (FCCC) Biosample Repository (https://www.foxchase.org/research/facilities/genetic-research-facilities/biosample-repository -facility) are being digitized in addition to slides provided by Temple University Hospital. This data includes 18 different types of tissue including approximately 38.5% urinary tissue and 16.5% gynecological tissue. These slides and the metadata provided with them are already anonymized and include diagnoses in a spreadsheet with sample and patient ID. We plan to release over 13,000 unannotated slides from the FCCC Corpus simultaneously with v1.0.0 of TUDP. Details of this release will also be discussed in this poster. Few digitally annotated databases of pathology samples like TUDP exist due to the extensive data collection and processing required. The breast corpus subset should be released by November 2021. By December 2021 we should also release the unannotated FCCC data. We are currently annotating urinary tract data as well. We expect to release about 5,600 processed TUH slides in this subset. We have an additional 53,000 unprocessed TUH slides digitized. Corpora of this size will stimulate the development of a new generation of deep learning technology. In clinical settings where resources are limited, an assistive diagnoses model could support pathologists’ workload and even help prioritize suspected cancerous cases. ACKNOWLEDGMENTS This material is supported by the National Science Foundation under grants nos. CNS-1726188 and 1925494. Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the views of the National Science Foundation. REFERENCES [1] N. Shawki et al., “The Temple University Digital Pathology Corpus,” in Signal Processing in Medicine and Biology: Emerging Trends in Research and Applications, 1st ed., I. Obeid, I. Selesnick, and J. Picone, Eds. New York City, New York, USA: Springer, 2020, pp. 67 104. https://www.springer.com/gp/book/9783030368432. [2] J. Picone, T. Farkas, I. Obeid, and Y. Persidsky, “MRI: High Performance Digital Pathology Using Big Data and Machine Learning.” Major Research Instrumentation (MRI), Division of Computer and Network Systems, Award No. 1726188, January 1, 2018 – December 31, 2021. https://www. isip.piconepress.com/projects/nsf_dpath/. [3] A. Gulati et al., “Conformer: Convolution-augmented Transformer for Speech Recognition,” in Proceedings of the Annual Conference of the International Speech Communication Association (INTERSPEECH), 2020, pp. 5036-5040. https://doi.org/10.21437/interspeech.2020-3015. [4] C.-J. Wu et al., “Machine Learning at Facebook: Understanding Inference at the Edge,” in Proceedings of the IEEE International Symposium on High Performance Computer Architecture (HPCA), 2019, pp. 331–344. https://ieeexplore.ieee.org/document/8675201. [5] I. Caswell and B. Liang, “Recent Advances in Google Translate,” Google AI Blog: The latest from Google Research, 2020. [Online]. Available: https://ai.googleblog.com/2020/06/recent-advances-in-google-translate.html. [Accessed: 01-Aug-2021]. [6] V. Khalkhali, N. Shawki, V. Shah, M. Golmohammadi, I. Obeid, and J. Picone, “Low Latency Real-Time Seizure Detection Using Transfer Deep Learning,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB), 2021, pp. 1 7. https://www.isip. piconepress.com/publications/conference_proceedings/2021/ieee_spmb/eeg_transfer_learning/. [7] J. Picone, T. Farkas, I. Obeid, and Y. Persidsky, “MRI: High Performance Digital Pathology Using Big Data and Machine Learning,” Philadelphia, Pennsylvania, USA, 2020. https://www.isip.piconepress.com/publications/reports/2020/nsf/mri_dpath/. [8] I. Hunt, S. Husain, J. Simons, I. Obeid, and J. Picone, “Recent Advances in the Temple University Digital Pathology Corpus,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB), 2019, pp. 1–4. https://ieeexplore.ieee.org/document/9037859. [9] A. P. Martinez, C. Cohen, K. Z. Hanley, and X. (Bill) Li, “Estrogen Receptor and Cytokeratin 5 Are Reliable Markers to Separate Usual Ductal Hyperplasia From Atypical Ductal Hyperplasia and Low-Grade Ductal Carcinoma In Situ,” Arch. Pathol. Lab. Med., vol. 140, no. 7, pp. 686–689, Apr. 2016. https://doi.org/10.5858/arpa.2015-0238-OA. 

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4. Eagle: End-to-end Deep Reinforcement Learning based Autonomous Control of PTZ Cameras

   https://doi.org/10.1145/3576842.3582366  

   Sandha, Sandeep Singh ; Balaji, Bharathan ; Garcia, Luis ; Srivastava, Mani ( May 2023 , IoTDI '23: Proceedings of the 8th ACM/IEEE Conference on Internet of Things Design and Implementation)

   Existing approaches for autonomous control of pan-tilt-zoom (PTZ) cameras use multiple stages where object detection and localization are performed separately from the control of the PTZ mechanisms. These approaches require manual labels and suffer from performance bottlenecks due to error propagation across the multi-stage flow of information. The large size of object detection neural networks also makes prior solutions infeasible for real-time deployment in resource-constrained devices. We present an end-to-end deep reinforcement learning (RL) solution called Eagle1 to train a neural network policy that directly takes images as input to control the PTZ camera. Training reinforcement learning is cumbersome in the real world due to labeling effort, runtime environment stochasticity, and fragile experimental setups. We introduce a photo-realistic simulation framework for training and evaluation of PTZ camera control policies. Eagle achieves superior camera control performance by maintaining the object of interest close to the center of captured images at high resolution and has up to 17% more tracking duration than the state-of-the-art. Eagle policies are lightweight (90x fewer parameters than Yolo5s) and can run on embedded camera platforms such as Raspberry PI (33 FPS) and Jetson Nano (38 FPS), facilitating real-time PTZ tracking for resource-constrained environments. With domain randomization, Eagle policies trained in our simulator can be transferred directly to real-world scenarios2. 

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5. tspDB: Time Series Predict DB

   Agarwal, Anish and ( January 2021 , Proceedings of Machine Learning Research)

   A major bottleneck of the current Machine Learning (ML) workflow is the time consuming, error prone engineering required to get data from a datastore or a database (DB) to the point an ML algorithm can be applied to it. This is further exacerbated since ML algorithms are now trained on large volumes of data, yet we need predictions in real-time, especially in a variety of time-series applications such as finance and real-time control systems. Hence, we explore the feasibility of directly integrating prediction functionality on top of a data store or DB. Such a system ideally: (i) provides an intuitive prediction query interface which alleviates the unwieldy data engineering; (ii) provides state-of-the-art statistical accuracy while ensuring incremental model update, low model training time and low latency for making predictions. As the main contribution we explicitly instantiate a proof-of-concept, tspDB which directly integrates with PostgreSQL. We rigorously test tspDB’s statistical and computational performance against the state-of-the-art time series algorithms, including a Long-Short-Term-Memory (LSTM) neural network and DeepAR (industry standard deep learning library by Amazon). Statistically, on standard time series benchmarks, tspDB outperforms LSTM and DeepAR with 1.1-1.3x higher relative accuracy. Computationally, tspDB is 59-62x and 94-95x faster compared to LSTM and DeepAR in terms of median ML model training time and prediction query latency, respectively. Further, compared to PostgreSQL’s bulk insert time and its SELECT query latency, tspDB is slower only by 1.3x and 2.6x respectively. That is, tspDB is a real-time prediction system in that its model training / prediction query time is similar to just inserting, reading data from a DB. As an algorithmic contribution, we introduce an incremental multivariate matrix factorization based time series method, which tspDB is built off. We show this method also allows one to produce reliable prediction intervals by accurately estimating the time-varying variance of a time series, thereby addressing an important problem in time series analysis. 

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