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Abstract Ring origami has emerged as a robust strategy for designing foldable and deployable structures due to its impressive packing abilities achieved from the snap-folding mechanism. In general, polygonal rings with rationally designed geometric parameters can fold into compacted three-loop configurations with curved segments, which result from the internal bending moment in the folded state. Inspired by the internal bending moment-induced curvature in the folded state, we explore how this curvature can be tuned by introducing initial natural curvature to the segments of the polygonal rings in their deployed stress-free state, and study how this initial curvature affects their folded configurations. Taking a clue from straight-segmented polygonal rings that fold into overlapping curved loops, we find it is possible to reverse the process by introducing curvature into the ring segments in the stress-free initial state such that the rings fold into a straight-line looped pattern with “zero” area. This realizes extreme packing. In this work, by a combination of experimental observation, finite element analysis, and theoretical modeling, we systematically study the effect of segment curvature on folding behavior, folded configurations, and packing of curved ring origami with different geometries. It is anticipated that curved ring origami can open a new avenue for the design of foldable and deployable structures with simple folded configurations and high packing efficiency.
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Protamine loops DNA in multiple steps
Abstract Protamine proteins dramatically condense DNA in sperm to almost crystalline packing levels. Here, we measure the first step in the in vitro pathway, the folding of DNA into a single loop. Current models for DNA loop formation are one-step, all-or-nothing models with a looped state and an unlooped state. However, when we use a Tethered Particle Motion (TPM) assay to measure the dynamic, real-time looping of DNA by protamine, we observe the presence of multiple folded states that are long-lived (∼100 s) and reversible. In addition, we measure folding on DNA molecules that are too short to form loops. This suggests that protamine is using a multi-step process to loop the DNA rather than a one-step process. To visualize the DNA structures, we used an Atomic Force Microscopy (AFM) assay. We see that some folded DNA molecules are loops with a ∼10-nm radius and some of the folded molecules are partial loops—c-shapes or s-shapes—that have a radius of curvature of ∼10 nm. Further analysis of these structures suggest that protamine is bending the DNA to achieve this curvature rather than increasing the flexibility of the DNA. We therefore conclude that protamine loops DNA in multiple steps, bending it into a loop.
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- Award ID(s):
- 1653501
- PAR ID:
- 10206835
- Date Published:
- Journal Name:
- Nucleic Acids Research
- Volume:
- 48
- Issue:
- 11
- ISSN:
- 0305-1048
- Page Range / eLocation ID:
- 6108 to 6119
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.1093/nar/gkaa365
