More Like this

1. Anomaly Detection for Science DMZs Using System Performance Data

   https://doi.org/10.1109/ICNC47757.2020.9049695  

   Gegan, Ross ; Mao, Christina ; Ghosal, Dipak ; Bishop, Matt ; Peisert, Sean ( February 2020 , 2020 International Conference on Computing, Networking and Communications)

   null (Ed.)

   Science DMZs are specialized networks that enable large-scale distributed scientific research, providing efficient and guaranteed performance while transferring large amounts of data at high rates. The high-speed performance of a Science DMZ is made viable via data transfer nodes (DTNs), therefore they are a critical point of failure. DTNs are usually monitored with network intrusion detection systems (NIDS). However, NIDS do not consider system performance data, such as network I/O interrupts and context switches, which can also be useful in revealing anomalous system performance potentially arising due to external network based attacks or insider attacks. In this paper, we demonstrate how system performance metrics can be applied towards securing a DTN in a Science DMZ network. Specifically, we evaluate the effectiveness of system performance data in detecting TCP-SYN flood attacks on a DTN using DBSCAN (a density-based clustering algorithm) for anomaly detection. Our results demonstrate that system interrupts and context switches can be used to successfully detect TCP-SYN floods, suggesting that system performance data could be effective in detecting a variety of attacks not easily detected through network monitoring alone. 

   more » « less
2. Towards Efficient Traffic Monitoring for Science DMZ with Side-Channel based Traffic Winnowing

   https://doi.org/10.1145/3180465.3180474  

   Li, Hongda ; Zhang, Fuqiang ; Yu, Lu ; Oakley, Jon ; Hu, Hongxin ; Brooks, Richard R. ( January 2018 , ACM International Workshop on Security in Software Defined Networks and Network Function Virtualization)

   As data-intensive science becomes the norm in many fields of science, high-performance data transfer is rapidly becoming a core scientific infrastructure requirement. To meet such a requirement, there has been a rapid growth across university campus to deploy Science DMZs. However, it is challenging to efficiently monitor the traffic in Science DMZ because traditional intrusion detection systems (IDSes) are equipped with deep packet inspection (DPI), which is resource-consuming. We propose to develop a lightweight side-channel based anomaly detection system for traffic winnowing to reduce the volume of traffic finally monitored by the IDS. We evaluate our approach based on the experiments in a Science DMZ environment. Our evaluation demonstrates that our approach can significantly reduce the resource usage in traffic monitoring for Science DMZ. 

   more » « less
3. A Comprehensive Tutorial on Science DMZ

   https://doi.org/10.1109/COMST.2018.2876086  

   Crichigno, Jorge ; Bou-Harb, Elias ; Ghani, Nasir ( May 2019 , IEEE Communications surveys and tutorials)

   Science and engineering applications are now generating data at an unprecedented rate. From large facilities such as the Large Hadron Collider to portable DNA sequencing devices, these instruments can produce hundreds of terabytes in short periods of time. Researchers and other professionals rely on networks to transfer data between sensing locations, instruments, data storage devices, and computing systems. While general-purpose networks, also referred to as enterprise networks, are capable of transporting basic data, such as e-mails and Web content, they face numerous challenges when transferring terabyte- and petabyte-scale data. At best, transfers of science data on these networks may last days or even weeks. In response to this challenge, the Science Demilitarized Zone (Science DMZ) has been proposed. The Science DMZ is a network or a portion of a network designed to facilitate the transfer of big science data. The main elements of the Science DMZ include: 1) specialized end devices, referred to as data transfer nodes (DTNs), built for sending/receiving data at a high speed over wide area networks; 2) high-throughput, friction-free paths connecting DTNs, instruments, storage devices, and computing systems; 3) performance measurement devices to monitor end-to-end paths over multiple domains; and 4) security policies and enforcement mechanisms tailored for high-performance environments. Despite the increasingly important role of Science DMZs, the literature is still missing a guideline to provide researchers and other professionals with the knowledge to broaden the understanding and development of Science DMZs. This paper addresses this gap by presenting a comprehensive tutorial on Science DMZs. The tutorial reviews fundamental network concepts that have a large impact on Science DMZs, such as router architecture, TCP attributes, and operational security. Then, the tutorial delves into protocols and devices at different layers, from the physical cyberinfrastructure to application-layer tools and security appliances, that must be carefully considered for the optimal operation of Science DMZs. This paper also contrasts Science DMZs with general-purpose networks, and presents empirical results and use cases applicable to current and future Science DMZs. 

   more » « less
4. Optimal Frameworks for Detecting Anomalies in Sensor-Intensive Heterogeneous Networks

   https://doi.org/10.1287/ijoc.2022.1192  

   Moghaddass, Ramin ; Guan, Yongtao ( January 2022 , INFORMS Journal on Computing)

   Many network/graph structures are continuously monitored by various sensors that are placed at a subset of nodes and edges. The multidimensional data collected from these sensors over time create large-scale graph data in which the data points are highly dependent. Monitoring large-scale attributed networks with thousands of nodes and heterogeneous sensor data to detect anomalies and unusual events is a complex and computationally expensive process. This paper introduces a new generic approach inspired by state-space models for network anomaly detection that can utilize the information from the network topology, the node attributes (sensor data), and the anomaly propagation sets in an integrated manner to analyze the entire network all at once. This article presents how heterogeneous network sensor data can be analyzed to locate the sources of anomalies as well as the anomalous regions in a network, which can be impacted by one or multiple anomalies at any time instance. Experimental results demonstrate the superior performance of our proposed framework in detecting anomalies in attributed graphs. Summary of Contribution: With the increasing availability of large-scale network sensors and rapid advances in artificial intelligence methods, fundamentally new analytical tools are needed that can integrate data collected from sensors across the networks for decision making while taking into account the stochastic and topological dependencies between nodes, sensors, and anomalies. This paper develops a framework to intelligently and efficiently analyze complex and highly dependent data collected from disparate sensors across large-scale network/graph structures to detect anomalies and abnormal behavior in real time. Unlike general purpose (often black-box) machine learning models, this paper proposes a unique framework for network/graph structures that incorporates the complexities of networks and interdependencies between network entities and sensors. Because of the multidisciplinary nature of the paper that involves optimization, machine learning, and system monitoring and control, it can help researchers in both operations research and computer science domains to develop new network-specific computing tools and machine learning frameworks to efficiently manage large-scale network data. 

   more » « less
5. A Deep Learning-Based Real-time Seizure Detection System

   https://doi.org/10.1109/SPMB50085.2020.9353623  

   Shawki, N. ; Elseify, T. ; Cap, T. ; Shah, V. ; Obeid, I. ; Picone, J. ( December 2020 , Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium (SPMB))

   Obeid, Iyad Selesnick (Ed.)

   Electroencephalography (EEG) is a popular clinical monitoring tool used for diagnosing brain-related disorders such as epilepsy [1]. As monitoring EEGs in a critical-care setting is an expensive and tedious task, there is a great interest in developing real-time EEG monitoring tools to improve patient care quality and efficiency [2]. However, clinicians require automatic seizure detection tools that provide decisions with at least 75% sensitivity and less than 1 false alarm (FA) per 24 hours [3]. Some commercial tools recently claim to reach such performance levels, including the Olympic Brainz Monitor [4] and Persyst 14 [5]. In this abstract, we describe our efforts to transform a high-performance offline seizure detection system [3] into a low latency real-time or online seizure detection system. An overview of the system is shown in Figure 1. The main difference between an online versus offline system is that an online system should always be causal and has minimum latency which is often defined by domain experts. The offline system, shown in Figure 2, uses two phases of deep learning models with postprocessing [3]. The channel-based long short term memory (LSTM) model (Phase 1 or P1) processes linear frequency cepstral coefficients (LFCC) [6] features from each EEG channel separately. We use the hypotheses generated by the P1 model and create additional features that carry information about the detected events and their confidence. The P2 model uses these additional features and the LFCC features to learn the temporal and spatial aspects of the EEG signals using a hybrid convolutional neural network (CNN) and LSTM model. Finally, Phase 3 aggregates the results from both P1 and P2 before applying a final postprocessing step. The online system implements Phase 1 by taking advantage of the Linux piping mechanism, multithreading techniques, and multi-core processors. To convert Phase 1 into an online system, we divide the system into five major modules: signal preprocessor, feature extractor, event decoder, postprocessor, and visualizer. The system reads 0.1-second frames from each EEG channel and sends them to the feature extractor and the visualizer. The feature extractor generates LFCC features in real time from the streaming EEG signal. Next, the system computes seizure and background probabilities using a channel-based LSTM model and applies a postprocessor to aggregate the detected events across channels. The system then displays the EEG signal and the decisions simultaneously using a visualization module. The online system uses C++, Python, TensorFlow, and PyQtGraph in its implementation. The online system accepts streamed EEG data sampled at 250 Hz as input. The system begins processing the EEG signal by applying a TCP montage [8]. Depending on the type of the montage, the EEG signal can have either 22 or 20 channels. To enable the online operation, we send 0.1-second (25 samples) length frames from each channel of the streamed EEG signal to the feature extractor and the visualizer. Feature extraction is performed sequentially on each channel. The signal preprocessor writes the sample frames into two streams to facilitate these modules. In the first stream, the feature extractor receives the signals using stdin. In parallel, as a second stream, the visualizer shares a user-defined file with the signal preprocessor. This user-defined file holds raw signal information as a buffer for the visualizer. The signal preprocessor writes into the file while the visualizer reads from it. Reading and writing into the same file poses a challenge. The visualizer can start reading while the signal preprocessor is writing into it. To resolve this issue, we utilize a file locking mechanism in the signal preprocessor and visualizer. Each of the processes temporarily locks the file, performs its operation, releases the lock, and tries to obtain the lock after a waiting period. The file locking mechanism ensures that only one process can access the file by prohibiting other processes from reading or writing while one process is modifying the file [9]. The feature extractor uses circular buffers to save 0.3 seconds or 75 samples from each channel for extracting 0.2-second or 50-sample long center-aligned windows. The module generates 8 absolute LFCC features where the zeroth cepstral coefficient is replaced by a temporal domain energy term. For extracting the rest of the features, three pipelines are used. The differential energy feature is calculated in a 0.9-second absolute feature window with a frame size of 0.1 seconds. The difference between the maximum and minimum temporal energy terms is calculated in this range. Then, the first derivative or the delta features are calculated using another 0.9-second window. Finally, the second derivative or delta-delta features are calculated using a 0.3-second window [6]. The differential energy for the delta-delta features is not included. In total, we extract 26 features from the raw sample windows which add 1.1 seconds of delay to the system. We used the Temple University Hospital Seizure Database (TUSZ) v1.2.1 for developing the online system [10]. The statistics for this dataset are shown in Table 1. A channel-based LSTM model was trained using the features derived from the train set using the online feature extractor module. A window-based normalization technique was applied to those features. In the offline model, we scale features by normalizing using the maximum absolute value of a channel [11] before applying a sliding window approach. Since the online system has access to a limited amount of data, we normalize based on the observed window. The model uses the feature vectors with a frame size of 1 second and a window size of 7 seconds. We evaluated the model using the offline P1 postprocessor to determine the efficacy of the delayed features and the window-based normalization technique. As shown by the results of experiments 1 and 4 in Table 2, these changes give us a comparable performance to the offline model. The online event decoder module utilizes this trained model for computing probabilities for the seizure and background classes. These posteriors are then postprocessed to remove spurious detections. The online postprocessor receives and saves 8 seconds of class posteriors in a buffer for further processing. It applies multiple heuristic filters (e.g., probability threshold) to make an overall decision by combining events across the channels. These filters evaluate the average confidence, the duration of a seizure, and the channels where the seizures were observed. The postprocessor delivers the label and confidence to the visualizer. The visualizer starts to display the signal as soon as it gets access to the signal file, as shown in Figure 1 using the “Signal File” and “Visualizer” blocks. Once the visualizer receives the label and confidence for the latest epoch from the postprocessor, it overlays the decision and color codes that epoch. The visualizer uses red for seizure with the label SEIZ and green for the background class with the label BCKG. Once the streaming finishes, the system saves three files: a signal file in which the sample frames are saved in the order they were streamed, a time segmented event (TSE) file with the overall decisions and confidences, and a hypotheses (HYP) file that saves the label and confidence for each epoch. The user can plot the signal and decisions using the signal and HYP files with only the visualizer by enabling appropriate options. For comparing the performance of different stages of development, we used the test set of TUSZ v1.2.1 database. It contains 1015 EEG records of varying duration. The any-overlap performance [12] of the overall system shown in Figure 2 is 40.29% sensitivity with 5.77 FAs per 24 hours. For comparison, the previous state-of-the-art model developed on this database performed at 30.71% sensitivity with 6.77 FAs per 24 hours [3]. The individual performances of the deep learning phases are as follows: Phase 1’s (P1) performance is 39.46% sensitivity and 11.62 FAs per 24 hours, and Phase 2 detects seizures with 41.16% sensitivity and 11.69 FAs per 24 hours. We trained an LSTM model with the delayed features and the window-based normalization technique for developing the online system. Using the offline decoder and postprocessor, the model performed at 36.23% sensitivity with 9.52 FAs per 24 hours. The trained model was then evaluated with the online modules. The current performance of the overall online system is 45.80% sensitivity with 28.14 FAs per 24 hours. Table 2 summarizes the performances of these systems. The performance of the online system deviates from the offline P1 model because the online postprocessor fails to combine the events as the seizure probability fluctuates during an event. The modules in the online system add a total of 11.1 seconds of delay for processing each second of the data, as shown in Figure 3. In practice, we also count the time for loading the model and starting the visualizer block. When we consider these facts, the system consumes 15 seconds to display the first hypothesis. The system detects seizure onsets with an average latency of 15 seconds. Implementing an automatic seizure detection model in real time is not trivial. We used a variety of techniques such as the file locking mechanism, multithreading, circular buffers, real-time event decoding, and signal-decision plotting to realize the system. A video demonstrating the system is available at: https://www.isip.piconepress.com/projects/nsf_pfi_tt/resources/videos/realtime_eeg_analysis/v2.5.1/video_2.5.1.mp4. The final conference submission will include a more detailed analysis of the online performance of each module. ACKNOWLEDGMENTS Research reported in this publication was most recently supported by the National Science Foundation Partnership for Innovation award number IIP-1827565 and the Pennsylvania Commonwealth Universal Research Enhancement Program (PA CURE). Any opinions, findings, and conclusions or recommendations expressed in this material are those of the author(s) and do not necessarily reflect the official views of any of these organizations. REFERENCES [1] A. Craik, Y. He, and J. L. Contreras-Vidal, “Deep learning for electroencephalogram (EEG) classification tasks: a review,” J. Neural Eng., vol. 16, no. 3, p. 031001, 2019. https://doi.org/10.1088/1741-2552/ab0ab5. [2] A. C. Bridi, T. Q. Louro, and R. C. L. Da Silva, “Clinical Alarms in intensive care: implications of alarm fatigue for the safety of patients,” Rev. Lat. Am. Enfermagem, vol. 22, no. 6, p. 1034, 2014. https://doi.org/10.1590/0104-1169.3488.2513. [3] M. Golmohammadi, V. Shah, I. Obeid, and J. Picone, “Deep Learning Approaches for Automatic Seizure Detection from Scalp Electroencephalograms,” in Signal Processing in Medicine and Biology: Emerging Trends in Research and Applications, 1st ed., I. Obeid, I. Selesnick, and J. Picone, Eds. New York, New York, USA: Springer, 2020, pp. 233–274. https://doi.org/10.1007/978-3-030-36844-9_8. [4] “CFM Olympic Brainz Monitor.” [Online]. Available: https://newborncare.natus.com/products-services/newborn-care-products/newborn-brain-injury/cfm-olympic-brainz-monitor. [Accessed: 17-Jul-2020]. [5] M. L. Scheuer, S. B. Wilson, A. Antony, G. Ghearing, A. Urban, and A. I. Bagic, “Seizure Detection: Interreader Agreement and Detection Algorithm Assessments Using a Large Dataset,” J. Clin. Neurophysiol., 2020. https://doi.org/10.1097/WNP.0000000000000709. [6] A. Harati, M. Golmohammadi, S. Lopez, I. Obeid, and J. Picone, “Improved EEG Event Classification Using Differential Energy,” in Proceedings of the IEEE Signal Processing in Medicine and Biology Symposium, 2015, pp. 1–4. https://doi.org/10.1109/SPMB.2015.7405421. [7] V. Shah, C. Campbell, I. Obeid, and J. Picone, “Improved Spatio-Temporal Modeling in Automated Seizure Detection using Channel-Dependent Posteriors,” Neurocomputing, 2021. [8] W. Tatum, A. Husain, S. Benbadis, and P. Kaplan, Handbook of EEG Interpretation. New York City, New York, USA: Demos Medical Publishing, 2007. [9] D. P. Bovet and C. Marco, Understanding the Linux Kernel, 3rd ed. O’Reilly Media, Inc., 2005. https://www.oreilly.com/library/view/understanding-the-linux/0596005652/. [10] V. Shah et al., “The Temple University Hospital Seizure Detection Corpus,” Front. Neuroinform., vol. 12, pp. 1–6, 2018. https://doi.org/10.3389/fninf.2018.00083. [11] F. Pedregosa et al., “Scikit-learn: Machine Learning in Python,” J. Mach. Learn. Res., vol. 12, pp. 2825–2830, 2011. https://dl.acm.org/doi/10.5555/1953048.2078195. [12] J. Gotman, D. Flanagan, J. Zhang, and B. Rosenblatt, “Automatic seizure detection in the newborn: Methods and initial evaluation,” Electroencephalogr. Clin. Neurophysiol., vol. 103, no. 3, pp. 356–362, 1997. https://doi.org/10.1016/S0013-4694(97)00003-9. 

   more » « less