Title: Benthic Flow and Mixing in a Shallow Shoal Grass (Halodule wrightii) Fringe
Mean flow and turbulence measurements collected in a shallow Halodule wrightii shoal grass fringe highlighted significant heterogeneity in hydrodynamic effects over relatively small spatial scales. Experiments were conducted within the vegetation canopy (~4 cm above bottom) for relatively sparse (40% cover) and dense (70% cover) vegetation, with reference measurements collected near the bed above bare sediment. Significant benthic velocity shear was observed at all sample locations, with canopy shear layers that penetrated nearly to the bed at both vegetated sites. Turbulent shear production (P) was balanced by turbulent kinetic energy dissipation (ϵ) at all sample locations (P/ϵ≈1), suggesting that stem-generated turbulence played a minor role in the overall turbulence budget. While the more sparsely vegetated sample site was associated with enhanced channel-to-shore velocity attenuation (71.4 ± 1.0%) relative to flows above bare sediment (51.7 ± 2.2%), unexpectedly strong cross-shore currents were observed nearshore in the dense canopy (VNS), with magnitudes that were nearly twice as large as those measured in the main channel (VCH; VNS/VCH¯ = 1.81 ± 0.08). These results highlight the importance of flow steering and acceleration for within- and across-canopy transport, especially at the scale of individual vegetation patches, with important implications for nutrient and sediment fluxes. Importantly, this work represents one of the first hydrodynamic studies of shoal grass fringes in shallow coastal estuaries, as well as one of the only reports of turbulent mixing within H. wrightii canopies.  more » « less
Award ID(s):
1944880 1617374
PAR ID:
10249118
Author(s) / Creator(s):
; ;
Date Published:
Journal Name:
Geosciences
Volume:
11
Issue:
3
ISSN:
2076-3263
Page Range / eLocation ID:
115
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Oysters are ecosystem engineers that shape coastal aquatic environments through hydrodynamic influence, which is governed by the reef structure. Hydrodynamic studies have investigated effects of oyster reefs as whole systems, overlooking the spatial variability inherent in canopy structures. In this research, a field investigation was undertaken to characterize spatial variability of flow dynamics within a single eastern oyster (Crassostrea virginica) reef and query how the local canopy density influences the hydrodynamic environment. High-resolution flow measurements were taken within and above the oyster canopy over a range of flow conditions. Hydrodynamics were compared across reef locations as the oyster canopy density increased from sparse to very dense. Unique hydrodynamic behaviors were observed within and above all canopies. For example, flow attenuation was more complete within the canopy (70%-99% attenuation of incident flows) as compared to above (48%-65%). Canopies consisting of moderately dense to dense clusters of oysters exhibited similar hydrodynamic behaviors, characterized by high levels of flow attenuation (64%-97%) and turbulent mixing (mean turbulence intensity up to 30 times the shear velocity). Locations with sparse canopy density and the greatest density, where oysters were packed homogeneously rather than clustered, also greatly attenuated flows (70%-99% attenuation of incident flows) but were characterized by lower turbulent mixing (mean turbulence intensity 1-5 times the shear velocity). Flow augmentation (60% increase in flow speed relative to incident flow) was observed only above the homogeneously dense canopy, indicating development of a shear layer above the canopy. Quadrant analysis revealed that turbulent patterns observed in the vicinity of the homogeneous dense canopy were relatively orderly as compared to the sparse, moderately dense, and dense clustered canopies. Study findings quantify hydrodynamic variability found within natural intertidal oyster reefs, with applications to the design of reef-based natural infrastructure and prediction of how reefs may affect flow and sediment transport. 
    more » « less
  2. Hydrodynamic experiments were conducted on reference and restored oyster reefs in Mosquito Lagoon, Florida (USA) between June and November 2018. Measurements were collected on intact, degraded, and restored (restoration age: 6month, 2years, 4years) oyster reefs (Crassostrea virginica) to investigate differences in flow and turbulence characteristics related to restoration age. The dataset presented herein includes hydrodynamic observations (timeseries) from experiments conducted on five different oyster reefs (Reference, R-2017, R-2016, R-2014, Degraded), with measurements that include: (1) forcing characteristics (wave heights, water depths, wind speeds, channel velocities), (2) reef characteristics (oyster densities, solid volume fractions), and (3) near-bed flow and turbulence observations (flow speeds, turbulent energy, turbulent kinetic energy dissipation, shear production) from within and above the oyster canopy on sample reefs. Data are presented as timeseries (column vectors) in nine .txt files, with one file for each experiment. 
    more » « less
  3. null (Ed.)
    Recent shifts in the presence and abundance of species on shallow Caribbean coral reefs have left octocorals as the dominant functional group on some reefs, creating an “animal forest” with an associated canopy. This transition changes the reef profile potentially affecting flow and sedimentation. We examined the effects of an octocoral forest on the depositional environment on a shallow-water fringing reef system on the south shore of St John, USVI. The depositional environment was characterized as canopy or non-canopy based on octocoral density. The effect of the octocoral canopy on flow and sedimentation was assessed using clod cards and sediment traps at 15 paired locations. The octocoral canopy altered flow resulting in greater levels of turbulence within the canopy. Sediment traps in areas of dense octocoral canopy accumulated greater amounts of sediment, with coarser, more rounded grains. Organic content of sediments collected in the traps was greater within the canopy than outside of it. The increase in turbulence within the canopy was likely due to wave driven oscillatory flow interacting with the octocoral colonies. Sediment traps in the canopy likely had greater sediment accumulation due to both resuspension of sediments from within the canopy and deposition of imported sediments as flow decreased within the canopy. The presence of octocoral canopies and the reworking of sediment within them may affect the success of settling larvae and the evolution of reef structure. 
    more » « less
  4. Abstract Aquatic vegetation plays an important role in natural water environments by interacting with the flow and generating turbulence that affects the air‐water and sediment‐water interfacial transfer. Regular and staggered arrays are often set as simplified layouts for vegetation canopy to study both mean flow and turbulence statistics in vegetated flows, which creates uniform spacing between vegetation elements, resulting in preferential flow paths within the array. Such preferential paths can produce local high velocity and strong turbulence, which do not necessarily happen in natural environments where vegetation is randomly distributed. How the randomness of the canopy affects interfacial processes by altering spatial turbulence distribution, which can potentially lead to different turbulence feedback on the interfacial transfer process, remains an open question. This study conducted a series of laboratory experiments in a race‐track flume using rigid cylinders as plant surrogates. Mean and turbulent flow statistics were characterized by horizontal‐ and vertical‐sliced PIV. Based on the measured flow characteristics under different stem diameters and array configurations, we propose a method to quantify the randomness of the vegetation array and update a sediment‐water‐air interfacial gas transfer model with the randomness parameter to improve its accuracy. The updated model agrees well with the dissolved oxygen experimental data from our study and data from existing literature at various scales. The study provides critical insight into water quality management in vegetated channels with improved dissolved oxygen predictions considering vegetation layout as part of the interfacial transfer model. 
    more » « less
  5. Abstract Aquatic vegetation has the potential to increase suspended sediment capture while also increasing sediment resuspension and bedload transport. Suspended sediment can induce density stratification, which modulates the turbulence in the water column. We derive a Rouse‐based formulation for suspended sediment concentration (SSC) including the effect of sediment‐induced density stratification. We perform Large Eddy Simulations of vegetated and non‐vegetated channels to explicitly highlight the effect of stratification on SSC profiles. We found that the impact of stratification is dominant in the near‐bed region within the bottom boundary layer, affecting both sediment resuspension and bedload transport. Stratification reduces the likelihood of both dominant sweep and ejection events in the near the bed region which may affect sediment entrainment and bedload transport. Modifications to existing models of sediment entrainment and bedload transport are suggested to account for the effects of sediment induced stratification in vegetated and non‐vegetated channels. 
    more » « less