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1. Identifying the Dominant Drivers of Hydrological Change in the Contiguous United States

   https://doi.org/10.1029/2021WR029738  

   Li, Zhiying; Quiring, Steven M. (May 2021, Water Resources Research)

   Abstract Understanding the dominant drivers of hydrological change is essential for water resources management. Watersheds in the United States are experiencing different types of changes (e.g., wet gets wetter and dry gets drier); however, few studies have analyzed what drivers are responsible for these changes, and how the dominant drivers vary over time and as a function of the climate/water regime and land cover. This study uses a time‐varying Budyko framework to quantify the relative importance of precipitation, potential evapotranspiration, and other factors (e.g., climate seasonality, agricultural drainage, and urbanization) in 889 watersheds in the contiguous United States from 1950 to 2009. Results show that watersheds that are getting wetter are primarily due to increases in precipitation. However, watersheds in dry climates that are getting drier are primarily due to other factors, while watersheds in wet climates that are getting drier are primarily due to precipitation. The drivers causing statistically significant streamflow trends vary depending on dominant land‐use types. Temporally, the increasing effects of other factors are more pronounced after the 1980s in the Midwest. The dominant drivers of streamflow in the United States are time‐varying instead of constant. This is consistent with non‐stationary patterns of streamflow. The time‐varying drivers provide information on the processes that are increasingly important and require the most attention in water resources management. 

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2. Flavonols improve tomato pollen thermotolerance during germination and tube elongation by maintaining reactive oxygen species homeostasis

   https://doi.org/10.1093/plcell/koae222  

   Postiglione, Anthony E; Delange, Allison M; Ali, Mohammad Foteh; Wang, Eric Y; Houben, Maarten; Hahn, Stacy L; Khoury, Maleana G; Roark, Colleen M; Davis, Molly; Reid, Robert W; et al (August 2024, The Plant Cell)

   Elevated temperatures impair pollen performance and reproductive success, resulting in lower crop yields. The tomato (Solanum lycopersicum) anthocyanin reduced (are) mutant harbors a mutation in FLAVANONE 3-HYDROXYLASE (F3H), resulting in impaired flavonol antioxidant biosynthesis. The are mutant has reduced pollen performance and seed set relative to the VF36 parental line, phenotypes that are accentuated at elevated temperatures. Transformation of are with the wild-type F3H gene, or chemical complementation with flavonols, prevented temperature-dependent reactive oxygen species (ROS) accumulation in pollen and restored the reduced viability, germination, and tube elongation of are to VF36 levels. Overexpression of F3H in VF36 prevented temperature-driven ROS increases and impaired pollen performance, revealing that flavonol biosynthesis promotes thermotolerance. Although stigmas of are had reduced flavonol and elevated ROS levels, the growth of are pollen tubes was similarly impaired in both are and VF36 pistils. RNA-seq was performed at optimal and stress temperatures in are, VF36, and the F3H overexpression line at multiple timepoints across pollen tube elongation. The number of differentially expressed genes increased over time under elevated temperatures in all genotypes, with the greatest number in are. These findings suggest potential agricultural interventions to combat the negative effects of heat-induced ROS in pollen that lead to reproductive failure. 

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3. Chloroviruses

   https://doi.org/10.3390/v12010020  

   Van Etten, James L.; Agarkova, Irina V.; Dunigan, David D. (January 2020, Viruses)

   Chloroviruses are large dsDNA, plaque-forming viruses that infect certain chlorella-like green algae; the algae are normally mutualistic endosymbionts of protists and metazoans and are often referred to as zoochlorellae. The viruses are ubiquitous in inland aqueous environments throughout the world and occasionally single types reach titers of thousands of plaque-forming units per ml of native water. The viruses are icosahedral in shape with a spike structure located at one of the vertices. They contain an internal membrane that is required for infectivity. The viral genomes are 290 to 370 kb in size, which encode up to 16 tRNAs and 330 to ~415 proteins, including many not previously seen in viruses. Examples include genes encoding DNA restriction and modification enzymes, hyaluronan and chitin biosynthetic enzymes, polyamine biosynthetic enzymes, ion channel and transport proteins, and enzymes involved in the glycan synthesis of the virus major capsid glycoproteins. The proteins encoded by many of these viruses are often the smallest or among the smallest proteins of their class. Consequently, some of the viral proteins are the subject of intensive biochemical and structural investigation. 

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4. Direct serendipity finite elements on cuboidal hexahedra

   https://doi.org/10.1016/j.cma.2024.117500  

   Arbogast, Todd; Wang, Chuning (January 2025, Computer Methods in Applied Mechanics and Engineering)

   We construct direct serendipity finite elements on general cuboidal hexahedra, which are 𝐻1-conforming and optimally approximate to any order. The new finite elements are direct in that the shape functions are directly defined on the physical element. Moreover, they are serendipity by possessing a minimal number of degrees of freedom satisfying the conformity requirement. Their shape function spaces consist of polynomials plus (generally nonpolynomial) supplemental functions, where the polynomials are included for the approximation property and supplements are added to achieve 𝐻1 -conformity. The finite elements are fully constructive. The shape function spaces of higher order 𝑟 ≥ 3 are developed first, and then the lower order spaces are constructed as subspaces of the third order space. Under a shape regularity assumption, and a mild restriction on the choice of supplemental functions, we develop the convergence properties of the new direct serendipity finite elements. Numerical results with different choices of supplements are compared on two mesh sequences, one regularly distorted and the other one randomly distorted. They all possess a convergence rate that aligns with the theory, while a slight difference lies in their performance. 

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5. Direct serendipity finite elements on cuboidal hexahedra

   Arbogast, Todd; Wang, Chuning (October 2024, Computer methods in applied mechanics and engineering)

   We construct direct serendipity finite elements on general cuboidal hexahedra, which are H1-conforming and optimally approximate to any order. The new finite elements are direct in that the shape functions are directly defined on the physical element. Moreover, they are serendipity by possessing a minimal number of degrees of freedom satisfying the conformity requirement. Their shape function spaces consist of polynomials plus (generally nonpolynomial) supplemental functions, where the polynomials are included for the approximation property and supplements are added to achieve H1-conformity. The finite elements are fully constructive. The shape function spaces of higher order 𝑟 ≥ 3 are developed first, and then the lower order spaces are constructed as subspaces of the third order space. Under a shape regularity assumption, and a mild restriction on the choice of supplemental functions, we develop the convergence properties of the new direct serendipity finite elements. Numerical results with different choices of supplements are compared on two mesh sequences, one regularly distorted and the other one randomly distorted. They all possess a convergence rate that aligns with the theory, while a slight difference lies in their performance. 

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