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Purpose: We propose a formal framework for the modeling and segmentation of minimally invasive surgical tasks using a unified set of motion primitives (MPs) to enable more objective labeling and the aggregation of different datasets. Methods: We model dry-lab surgical tasks as finite state machines, representing how the execution of MPs as the basic surgical actions results in the change of surgical context, which characterizes the physical interactions among tools and objects in the surgical environment. We develop methods for labeling surgical context based on video data and for automatic translation of context to MP labels. We then use our framework to create the COntext and Motion Primitive Aggregate Surgical Set (COMPASS), including six dry-lab surgical tasks from three publicly available datasets (JIGSAWS, DESK, and ROSMA), with kinematic and video data and context and MP labels. Results: Our context labeling method achieves near-perfect agreement between consensus labels from crowd-sourcing and expert surgeons. Segmentation of tasks to MPs results in the creation of the COMPASS dataset that nearly triples the amount of data for modeling and analysis and enables the generation of separate transcripts for the left and right tools. Conclusion: The proposed framework results in high quality labeling of surgical data based on context and fine-grained MPs. Modeling surgical tasks with MPs enables the aggregation of different datasets and the separate analysis of left and right hands for bimanual coordination assessment. Our formal framework and aggregate dataset can support the development of explainable and multi-granularity models for improved surgical process analysis, skill assessment, error detection, and autonomy.
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Can I Solve It? Identifying APIs Required to Complete OSS Tasks
Open Source Software projects add labels to open issues to help contributors choose tasks. However, manually labeling issues is time-consuming and error-prone. Current automatic approaches for creating labels are mostly limited to classifying issues as a bug/non-bug. In this paper, we investigate the feasibility and relevance of labeling issues with the domain of the APIs required to complete the tasks. We leverage the issues' description and the project history to build prediction models, which resulted in precision up to 82% and recall up to 97.8%. We also ran a user study (n=74) to assess these labels' relevancy to potential contributors. The results show that the labels were useful to participants in choosing tasks, and the API-domain labels were selected more often than the existing architecture-based labels. Our results can inspire the creation of tools to automatically label issues, helping developers to find tasks that better match their skills.
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- PAR ID:
- 10287965
- Date Published:
- Journal Name:
- Mining Software Repositories Conference (MSR 2021)
- Page Range / eLocation ID:
- 346 to 257
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.1109/MSR52588.2021.00047
