More Like this

1. FLUXNET-CH₄: a global, multi-ecosystem dataset and analysis of methane seasonality from freshwater wetlands

   https://doi.org/10.5194/essd-13-3607-2021  

   Delwiche, Kyle B. ; Knox, Sara Helen ; Malhotra, Avni ; Fluet-Chouinard, Etienne ; McNicol, Gavin ; Feron, Sarah ; Ouyang, Zutao ; Papale, Dario ; Trotta, Carlo ; Canfora, Eleonora ; et al ( January 2021 , Earth System Science Data)

   Abstract. Methane (CH4) emissions from natural landscapes constituteroughly half of global CH4 contributions to the atmosphere, yet largeuncertainties remain in the absolute magnitude and the seasonality ofemission quantities and drivers. Eddy covariance (EC) measurements ofCH4 flux are ideal for constraining ecosystem-scale CH4emissions due to quasi-continuous and high-temporal-resolution CH4flux measurements, coincident carbon dioxide, water, and energy fluxmeasurements, lack of ecosystem disturbance, and increased availability ofdatasets over the last decade. Here, we (1) describe the newly publisheddataset, FLUXNET-CH4 Version 1.0, the first open-source global dataset ofCH4 EC measurements (available athttps://fluxnet.org/data/fluxnet-ch4-community-product/, last access: 7 April 2021). FLUXNET-CH4includes half-hourly and daily gap-filled and non-gap-filled aggregatedCH4 fluxes and meteorological data from 79 sites globally: 42freshwater wetlands, 6 brackish and saline wetlands, 7 formerly drainedecosystems, 7 rice paddy sites, 2 lakes, and 15 uplands. Then, we (2) evaluate FLUXNET-CH4 representativeness for freshwater wetland coverageglobally because the majority of sites in FLUXNET-CH4 Version 1.0 arefreshwater wetlands which are a substantial source of total atmosphericCH4 emissions; and (3) we provide the first global estimates of theseasonal variability and seasonality predictors of freshwater wetlandCH4 fluxes. Our representativeness analysis suggests that thefreshwater wetland sites in the dataset cover global wetland bioclimaticattributes (encompassing energy, moisture, and vegetation-relatedparameters) in arctic, boreal, and temperate regions but only sparselycovermore »humid tropical regions. Seasonality metrics of wetland CH4emissions vary considerably across latitudinal bands. In freshwater wetlands(except those between 20∘ S to 20∘ N) the spring onsetof elevated CH4 emissions starts 3 d earlier, and the CH4emission season lasts 4 d longer, for each degree Celsius increase in meanannual air temperature. On average, the spring onset of increasing CH4emissions lags behind soil warming by 1 month, with very few sites experiencingincreased CH4 emissions prior to the onset of soil warming. Incontrast, roughly half of these sites experience the spring onset of risingCH4 emissions prior to the spring increase in gross primaryproductivity (GPP). The timing of peak summer CH4 emissions does notcorrelate with the timing for either peak summer temperature or peak GPP.Our results provide seasonality parameters for CH4 modeling andhighlight seasonality metrics that cannot be predicted by temperature or GPP(i.e., seasonality of CH4 peak). FLUXNET-CH4 is a powerful new resourcefor diagnosing and understanding the role of terrestrial ecosystems andclimate drivers in the global CH4 cycle, and future additions of sitesin tropical ecosystems and site years of data collection will provide addedvalue to this database. All seasonality parameters are available athttps://doi.org/10.5281/zenodo.4672601 (Delwiche et al., 2021).Additionally, raw FLUXNET-CH4 data used to extract seasonality parameterscan be downloaded from https://fluxnet.org/data/fluxnet-ch4-community-product/ (last access: 7 April 2021), and a completelist of the 79 individual site data DOIs is provided in Table 2 of this paper.« less
2. Evaluation of the CMIP6 Performance in Simulating Precipitation in the Amazon River Basin

   https://doi.org/10.3390/cli10080122  

   Monteverde, Corrie ; De Sales, Fernando ; Jones, Charles ( August 2022 , Climate)

   The Brazilian Amazon provides important hydrological cycle functions, including precipitation regimes that bring water to the people and environment and are critical to moisture recycling and transport, and represents an important variable for climate models to simulate accurately. This paper evaluates the performance of 13 Coupled Model Intercomparison Project Phase 6 (CMIP6) models. This is done by discussing results from spatial pattern mapping, Taylor diagram analysis and Taylor skill score, annual climatology comparison, cumulative distribution analysis, and empirical orthogonal function (EOF) analysis. Precipitation analysis shows: (1) This region displays higher rainfall in the north-northwest and drier conditions in the south. Models tend to underestimate northern values or overestimate the central to northwest averages. (2) The southern Amazon has a more defined dry season (June, July, and August) and wet season (December, January, and February) and models simulate this well. The northern Amazon dry season tends to occur in August, September, and October and the wet season occurs in March, April, and May, and models are not able to capture the climatology as well. Models tend to produce too much rainfall at the start of the wet season and tend to either over- or under-estimate the dry season, although ensemble meansmore »typically display the overall pattern more precisely. (3) Models struggle to capture extreme values of precipitation except when precipitation values are close to 0. (4) EOF analysis shows that models capture the dominant mode of variability, which was the annual cycle or South American Monsoon System. (5) When all evaluation metrics are considered, the models that perform best are CESM2, MIROC6, MRIESM20, SAM0UNICON, and the ensemble mean. This paper supports research in determining the most up-to-date CMIP6 model performance of precipitation regime for 1981–2014 for the Brazilian Amazon. Results will aid in understanding future projections of precipitation for the selected subset of global climate models and allow scientists to construct reliable model ensembles, as precipitation plays a role in many sectors of the economy, including the ecosystem, agriculture, energy, and water security.« less
3. Assessing Model Predictions of Carbon Dynamics in Global Drylands

   https://doi.org/10.3389/fenvs.2022.790200  

   Fawcett, Dominic ; Cunliffe, Andrew M. ; Sitch, Stephen ; O’Sullivan, Michael ; Anderson, Karen ; Brazier, Richard E. ; Hill, Timothy C. ; Anthoni, Peter ; Arneth, Almut ; Arora, Vivek K. ; et al ( April 2022 , Frontiers in Environmental Science)

   Drylands cover ca. 40% of the land surface and are hypothesised to play a major role in the global carbon cycle, controlling both long-term trends and interannual variation. These insights originate from land surface models (LSMs) that have not been extensively calibrated and evaluated for water-limited ecosystems. We need to learn more about dryland carbon dynamics, particularly as the transitory response and rapid turnover rates of semi-arid systems may limit their function as a carbon sink over multi-decadal scales. We quantified aboveground biomass carbon (AGC; inferred from SMOS L-band vegetation optical depth) and gross primary productivity (GPP; from PML-v2 inferred from MODIS observations) and tested their spatial and temporal correspondence with estimates from the TRENDY ensemble of LSMs. We found strong correspondence in GPP between LSMs and PML-v2 both in spatial patterns (Pearson’s r = 0.9 for TRENDY-mean) and in inter-annual variability, but not in trends. Conversely, for AGC we found lesser correspondence in space (Pearson’s r = 0.75 for TRENDY-mean, strong biases for individual models) and in the magnitude of inter-annual variability compared to satellite retrievals. These disagreements likely arise from limited representation of ecosystem responses to plant water availability, fire, and photodegradation that drive dryland carbon dynamics. Wemore »assessed inter-model agreement and drivers of long-term change in carbon stocks over centennial timescales. This analysis suggested that the simulated trend of increasing carbon stocks in drylands is in soils and primarily driven by increased productivity due to CO 2 enrichment. However, there is limited empirical evidence of this 50-year sink in dryland soils. Our findings highlight important uncertainties in simulations of dryland ecosystems by current LSMs, suggesting a need for continued model refinements and for greater caution when interpreting LSM estimates with regards to current and future carbon dynamics in drylands and by extension the global carbon cycle.« less
4. Florida mangrove saltmarsh reference surface soils

   https://doi.org/10.6073/pasta/0e08cbe07c84488cb7b9dd16669946d0  

   Lewis, David Bruce ( January 2021 )

   Abstract

   Site description. This data package consists of data obtained from sampling surface soil (the 0-7.6 cm depth profile) in black mangrove (Avicennia germinans) dominated forest and black needlerush (Juncus roemerianus) saltmarsh along the Gulf of Mexico coastline in peninsular west-central Florida, USA. This location has a subtropical climate with mean daily temperatures ranging from 15.4 °C in January to 27.8 °C in August, and annual precipitation of 1336 mm. Precipitation falls as rain primarily between June and September. Tides are semi-diurnal, with 0.57 m median amplitudes during the year preceding sampling (U.S. NOAA National Ocean Service, Clearwater Beach, Florida, station 8726724). Sea-level rise is 4.0 ± 0.6 mm per year (1973-2020 trend, mean ± 95 % confidence interval, NOAA NOS Clearwater Beach station). The A. germinans mangrove zone is either adjacent to water or fringed on the seaward side by a narrow band of red mangrove (Rhizophora mangle). A near-monoculture of J. roemerianus is often adjacent to and immediately landward of the A. germinans zone. The transition from the mangrove to the J. roemerianus zone is variable in our study area. An abrupt edge between closed-canopy mangrove and J. roemerianus monoculture may extend for up to several hundred meters in some locations, while other stretches of ecotone present a gradual transition where smaller, widely spaced trees are interspersed into the herbaceous marsh. Juncus roemerianus then extends landward to a high marsh patchwork of succulent halophytes (including Salicornia bigellovi, Sesuvium sp., and Batis maritima), scattered dwarf mangrove, and salt pans, followed in turn by upland vegetation that includes Pinus sp. and Serenoa repens. Field design and sample collection. We established three study sites spaced at approximately 5 km intervals along the western coastline of the central Florida peninsula. The sites consisted of the Salt Springs (28.3298°, -82.7274°), Energy Marine Center (28.2903°, -82.7278°), and Green Key (28.2530°, -82.7496°) sites on the Gulf of Mexico coastline in Pasco County, Florida, USA. At each site, we established three plot pairs, each consisting of one saltmarsh plot and one mangrove plot. Plots were 50 m^2 in size. Plots pairs within a site were separated by 230-1070 m, and the mangrove and saltmarsh plots composing a pair were 70-170 m apart. All plot pairs consisted of directly adjacent patches of mangrove forest and J. roemerianus saltmarsh, with the mangrove forests exhibiting a closed canopy and a tree architecture (height 4-6 m, crown width 1.5-3 m). Mangrove plots were located at approximately the midpoint between the seaward edge (water-mangrove interface) and landward edge (mangrove-marsh interface) of the mangrove zone. Saltmarsh plots were located 20-25 m away from any mangrove trees and into the J. roemerianus zone (i.e., landward from the mangrove-marsh interface). Plot pairs were coarsely similar in geomorphic setting, as all were located on the Gulf of Mexico coastline, rather than within major sheltering formations like Tampa Bay, and all plot pairs fit the tide-dominated domain of the Woodroffe classification (Woodroffe, 2002, "Coasts: Form, Process and Evolution", Cambridge University Press), given their conspicuous semi-diurnal tides. There was nevertheless some geomorphic variation, as some plot pairs were directly open to the Gulf of Mexico while others sat behind keys and spits or along small tidal creeks. Our use of a plot-pair approach is intended to control for this geomorphic variation. Plot center elevations (cm above mean sea level, NAVD 88) were estimated by overlaying the plot locations determined with a global positioning system (Garmin GPS 60, Olathe, KS, USA) on a LiDAR-derived bare-earth digital elevation model (Dewberry, Inc., 2019). The digital elevation model had a vertical accuracy of ± 10 cm (95 % CI) and a horizontal accuracy of ± 116 cm (95 % CI). Soil samples were collected via coring at low tide in June 2011. From each plot, we collected a composite soil sample consisting of three discrete 5.1 cm diameter soil cores taken at equidistant points to 7.6 cm depth. Cores were taken by tapping a sleeve into the soil until its top was flush with the soil surface, sliding a hand under the core, and lifting it up. Cores were then capped and transferred on ice to our laboratory at the University of South Florida (Tampa, Florida, USA), where they were combined in plastic zipper bags, and homogenized by hand into plot-level composite samples on the day they were collected. A damp soil subsample was immediately taken from each composite sample to initiate 1 y incubations for determination of active C and N (see below). The remainder of each composite sample was then placed in a drying oven (60 °C) for 1 week with frequent mixing of the soil to prevent aggregation and liberate water. Organic wetland soils are sometimes dried at 70 °C, however high drying temperatures can volatilize non-water liquids and oxidize and decompose organic matter, so 50 °C is also a common drying temperature for organic soils (Gardner 1986, "Methods of Soil Analysis: Part 1", Soil Science Society of America); we accordingly chose 60 °C as a compromise between sufficient water removal and avoidance of non-water mass loss. Bulk density was determined as soil dry mass per core volume (adding back the dry mass equivalent of the damp subsample removed prior to drying). Dried subsamples were obtained for determination of soil organic matter (SOM), mineral texture composition, and extractable and total carbon (C) and nitrogen (N) within the following week. Sample analyses. A dried subsample was apportioned from each composite sample to determine SOM as mass loss on ignition at 550 °C for 4 h. After organic matter was removed from soil via ignition, mineral particle size composition was determined using a combination of wet sieving and density separation in 49 mM (3 %) sodium hexametaphosphate ((NaPO_3)_6) following procedures in Kettler et al. (2001, Soil Science Society of America Journal 65, 849-852). The percentage of dry soil mass composed of silt and clay particles (hereafter, fines) was calculated as the mass lost from dispersed mineral soil after sieving (0.053 mm mesh sieve). Fines could have been slightly underestimated if any clay particles were burned off during the preceding ignition of soil. An additional subsample was taken from each composite sample to determine extractable N and organic C concentrations via 0.5 M potassium sulfate (K_2SO_4) extractions. We combined soil and extractant (ratio of 1 g dry soil:5 mL extractant) in plastic bottles, reciprocally shook the slurry for 1 h at 120 rpm, and then gravity filtered it through Fisher G6 (1.6 μm pore size) glass fiber filters, followed by colorimetric detection of nitrite (NO_2^-) + nitrate (NO_3^-) and ammonium (NH_4^+) in the filtrate (Hood Nowotny et al., 2010,Soil Science Society of America Journal 74, 1018-1027) using a microplate spectrophotometer (Biotek Epoch, Winooski, VT, USA). Filtrate was also analyzed for dissolved organic C (referred to hereafter as extractable organic C) and total dissolved N via combustion and oxidation followed by detection of the evolved CO_2 and N oxide gases on a Formacs HT TOC/TN analyzer (Skalar, Breda, The Netherlands). Extractable organic N was then computed as total dissolved N in filtrate minus extractable mineral N (itself the sum of extractable NH_4-N and NO_2-N + NO_3-N). We determined soil total C and N from dried, milled subsamples subjected to elemental analysis (ECS 4010, Costech, Inc., Valencia, CA, USA) at the University of South Florida Stable Isotope Laboratory. Median concentration of inorganic C in unvegetated surface soil at our sites is 0.5 % of soil mass (Anderson, 2019, Univ. of South Florida M.S. thesis via methods in Wang et al., 2011, Environmental Monitoring and Assessment 174, 241-257). Inorganic C concentrations are likely even lower in our samples from under vegetation, where organic matter would dilute the contribution of inorganic C to soil mass. Nevertheless, the presence of a small inorganic C pool in our soils may be counted in the total C values we report. Extractable organic C is necessarily of organic C origin given the method (sparging with HCl) used in detection. Active C and N represent the fractions of organic C and N that are mineralizable by soil microorganisms under aerobic conditions in long-term soil incubations. To quantify active C and N, 60 g of field-moist soil were apportioned from each composite sample, placed in a filtration apparatus, and incubated in the dark at 25 °C and field capacity moisture for 365 d (as in Lewis et al., 2014, Ecosphere 5, art59). Moisture levels were maintained by frequently weighing incubated soil and wetting them up to target mass. Daily CO_2 flux was quantified on 29 occasions at 0.5-3 week intervals during the incubation period (with shorter intervals earlier in the incubation), and these per day flux rates were integrated over the 365 d period to compute an estimate of active C. Observations of per day flux were made by sealing samples overnight in airtight chambers fitted with septa and quantifying headspace CO_2 accumulation by injecting headspace samples (obtained through the septa via needle and syringe) into an infrared gas analyzer (PP Systems EGM 4, Amesbury, MA, USA). To estimate active N, each incubated sample was leached with a C and N free, 35 psu solution containing micronutrients (Nadelhoffer, 1990, Soil Science Society of America Journal 54, 411-415) on 19 occasions at increasing 1-6 week intervals during the 365 d incubation, and then extracted in 0.5 M K_2SO_4 at the end of the incubation in order to remove any residual mineral N. Active N was then quantified as the total mass of mineral N leached and extracted. Mineral N in leached and extracted solutions was detected as NH_4-N and NO_2-N + NO_3-N via colorimetry as above. This incubation technique precludes new C and N inputs and persistently leaches mineral N, forcing microorganisms to meet demand by mineralizing existing pools, and thereby directly assays the potential activity of soil organic C and N pools present at the time of soil sampling. Because this analysis commences with disrupting soil physical structure, it is biased toward higher estimates of active fractions. Calculations. Non-mobile C and N fractions were computed as total C and N concentrations minus the extractable and active fractions of each element. This data package reports surface-soil constituents (moisture, fines, SOM, and C and N pools and fractions) in both gravimetric units (mass constituent / mass soil) and areal units (mass constituent / soil surface area integrated through 7.6 cm soil depth, the depth of sampling). Areal concentrations were computed as X × D × 7.6, where X is the gravimetric concentration of a soil constituent, D is soil bulk density (g dry soil / cm^3), and 7.6 is the sampling depth in cm.
   More>>
5. ORCHIDEE-PEAT (revision 4596), a model for northern peatland CO₂, water, and energy fluxes on daily to annual scales

   https://doi.org/10.5194/gmd-11-497-2018  

   Qiu, Chunjing ; Zhu, Dan ; Ciais, Philippe ; Guenet, Bertrand ; Krinner, Gerhard ; Peng, Shushi ; Aurela, Mika ; Bernhofer, Christian ; Brümmer, Christian ; Bret-Harte, Syndonia ; et al ( January 2018 , Geoscientific Model Development)

   Peatlands store substantial amounts of carbon and are vulnerable to climate change. We present a modified version of the Organising Carbon and Hydrology In Dynamic Ecosystems (ORCHIDEE) land surface model for simulating the hydrology, surface energy, and CO₂ fluxes of peatlands on daily to annual timescales. The model includes a separate soil tile in each 0.5° grid cell, defined from a global peatland map and identified with peat-specific soil hydraulic properties. Runoff from non-peat vegetation within a grid cell containing a fraction of peat is routed to this peat soil tile, which maintains shallow water tables. The water table position separates oxic from anoxic decomposition. The model was evaluated against eddy-covariance (EC) observations from 30 northern peatland sites, with the maximum rate of carboxylation (V_cmax) being optimized at each site. Regarding short-term day-to-day variations, the model performance was good for gross primary production (GPP) (r² =  0.76; Nash–Sutcliffe modeling efficiency, MEF  =  0.76) and ecosystem respiration (ER, r² =  0.78, MEF  =  0.75), with lesser accuracy for latent heat fluxes (LE, r² =  0.42, MEF  =  0.14) and and net ecosystem CO₂ exchange (NEE, r² =  0.38, MEF  =  0.26). Seasonal variations in GPP, ER, NEE, and energy fluxes on monthly scales showed moderate to high r² values (0.57–0.86). For spatial across-site gradients of annual meanmore »GPP, ER, NEE, and LE, r² values of 0.93, 0.89, 0.27, and 0.71 were achieved, respectively. Water table (WT) variation was not well predicted (r² < 0.1), likely due to the uncertain water input to the peat from surrounding areas. However, the poor performance of WT simulation did not greatly affect predictions of ER and NEE. We found a significant relationship between optimized V_cmax and latitude (temperature), which better reflects the spatial gradients of annual NEE than using an average V_cmax value.« less