skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Explore Research Products in the PAR
It may take a few hours for recently added research products to appear in PAR search results.


  • NSF Public Access
  • Search Results
  • Co-operative halogen bonds and nonconventional sp -C—H...O hydrogen bonds in 1:1 cocrystals formed between diethynylpyridines and N -halosuccinimides
Title: Co-operative halogen bonds and nonconventional sp -C—H...O hydrogen bonds in 1:1 cocrystals formed between diethynylpyridines and N -halosuccinimides
The rapid evaporation of 1:1 solutions of diethynylpyridines and N -halosuccinimides, that react together to form haloalkynes, led to the isolation of unreacted 1:1 cocrystals of the two components. The 1:1 cocrystal formed between 2,6-diethynylpyridine and N -iodosuccinimide (C 4 H 4 INO 2 ·C 9 H 5 N) contains an N -iodosuccinimide–pyridine I...N halogen bond and two terminal alkyne–succinimide carbonyl C—H...O hydrogen bonds. The three-dimensional extended structure features interwoven double-stranded supramolecular polymers that are interconnected through halogen bonds. The cocrystal formed between 3,5-diethynylpyridine and N -iodosuccinimide (C 4 H 4 INO 2 ·C 9 H 5 N) also features an I...N halogen bond and two C—H...O hydrogen bonds. However, the components form essentially planar double-stranded one-dimensional zigzag supramolecular polymers. The cocrystal formed between 3,5-diethynylpyridine and N -bromosuccinimide (C 4 H 4 BrNO 2 ·C 9 H 5 N) is isomorphous to the cocrystal formed between 3,5-diethynylpyridine and N -iodosuccinimide, with a Br...N halogen bond instead of an I...N halogen bond.  more » « less
Award ID(s):
1903581 1903593
PAR ID:
10349542
Author(s) / Creator(s):
;
Date Published:
Journal Name:
Acta Crystallographica Section C Structural Chemistry
Volume:
78
Issue:
7
ISSN:
2053-2296
Page Range / eLocation ID:
424 to 429
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. ; ; ; (, Acta Crystallographica Section C Structural Chemistry)
    The potential of pyrimidines to serve as ditopic halogen-bond acceptors is explored. The halogen-bonded cocrystals formed from solutions of either 5,5′-bipyrimidine (C 8 H 6 N 4 ) or 1,2-bis(pyrimidin-5-yl)ethyne (C 10 H 6 N 4 ) and 2 molar equivalents of 1,3-diiodotetrafluorobenzene (C 6 F 4 I 2 ) have a 1:1 composition. Each pyrimidine moiety acts as a single halogen-bond acceptor and the bipyrimidines act as ditopic halogen-bond acceptors. In contrast, the activated pyrimidines 2- and 5-{[4-(dimethylamino)phenyl]ethynyl}pyrimidine (C 14 H 13 N 3 ) are ditopic halogen-bond acceptors, and 1:1 halogen-bonded cocrystals are formed from 1:1 mixtures of each of the activated pyrimidines and either 1,2- or 1,3-diiodotetrafluorobenzene. A 1:1 cocrystal was also formed between 2-{[4-(dimethylamino)phenyl]ethynyl}pyrimidine and 1,4-diiodotetrafluorobenzene, while a 2:1 cocrystal was formed between 5-{[4-(dimethylamino)phenyl]ethynyl}pyrimidine and 1,4-diiodotetrafluorobenzene. 
    more » « less
  2. ; (, Acta Crystallographica Section C Structural Chemistry)
    The structures of a series of 2:1 cocrystals formed between 4-(dimethylamino)pyridine and each of 1,2,4,5-tetrachloro-3,6-diiodobenzene, 2C7H10N2·C6Cl4I2, 1,2,4,5-tetrabromo-3,6-diiodobenzene, 2C7H10N2·C6Br4I2, 1-bromo-4-iodo-2,3,5,6-tetrafluorobenzene, 2C7H10N2·C6BrF4I, and 1,2-dibromo-4,5-difluoro-3,6-diiodobenzene, 2C7H10N2·C6Br2F2I2, are reported. In all five structures, the core halogen-bonded 2:1 trimolecular units have geometrically similar parameters, with the central halogen-bond donor flanked by two pyridine halogen-bond acceptors twisted with respect to the central halogen-bond donor at angles ranging from 76 to 86°. The I...N halogen-bond separations are all short, ranging from 73.3 to 76.7% of the sum of the van der Waals radii, while the C—I...N bond angles are essentially linear. The Br...N halogen-bond separation in the cocrystal formed with 1-bromo-4-iodo-2,3,5,6-tetrafluorobenzene is 80.4% of the sum of the van der Waals radii. Subtle differences in the crystal packings are attributed to the role of secondary C—H...π and weak π-type interactions with chloro and bromo substituents. The cocrystals 2C7H10N2·C6Cl4I2and 2C7H10N2·C6Br4I2are isomorphous. 
    more » « less
  3. ; ; ; (, Acta Crystallographica Section C Structural Chemistry)
    2,4,6-Triaminopyrimidine is an interesting and challenging molecule due to the presence of multiple hydrogen-bond donors and acceptors. Its noncovalent interactions with a variety of carboxylic acids provide several supramolecular aggregates with frequently occurring molecular synthons. The present work focuses on the supramolecular interactions of 2,4,6-triaminopyrimidinium 3-(indol-3-yl)propionate–3-(indol-3-yl)propionic acid (1/1), C4H8N5+·C11H10NO2−·C11H11NO2, (I), 2,4,6-triaminopyrimidinium 2-(indol-3-yl)acetate, C4H8N5+·C10H8NO2−, (II), 2,4,6-triaminopyrimidinium 5-bromothiophene-2-carboxylate, C4H8N5+·C5H2BrO2S−, (III), and 2,4,6-triaminopyrimidinium 5-chlorothiophene-2-carboxylate, C4H8N5+·C5H2ClO2S−, (IV). All four salts exhibit robust homomeric and heteromericR22(8) ring motifs. Salts (I) and (II) develop sextuple [in (I)] and quadruple [in (I) and (II)] hydrogen-bonded arrays through fused-ring motifs. Salt (II) exhibits a rosette-like architecture. Salt (IV) is isostructural and isomorphous with salt (III), exhibiting an identical crystal structure with a different composition and an identical supramolecular architecture. In salts (III) and (IV), a linear hetero-tetrameric motif is formed and, in addition, both salts exhibit halogen–π interactions which enhance the crystal stability. All four salts develop a supramolecular hydrogen-bonded pattern facilitated by several N—H...O and N—H...N hydrogen bonds with multiple furcated donors and acceptors. 
    more » « less
  4. ; ; ; (, Acta Crystallographica Section E Crystallographic Communications)
    The formation and crystal structure of a zigzag network held together by I...N halogen bonds is reported. In particular, the halogen-bond donor is 1,3-diiodoperchlorobenzene ( C 6 I 2 Cl 4 ) while the acceptor is the photoproduct rtct -tetrakis(pyridin-4-yl)cyclobutane ( TPCB ). Curiously, within the resulting co-crystal ( C 6 I 2 Cl 4 )·( TPCB ), the photoproduct accepts only two halogen bonds between neighbouring 4-pyridyl rings and as a result behaves as a bent two-connected node rather than the expected four-connected centre. In addition, the photoproduct, TPCB , is also found to engage in C—H...N hydrogen bonds, forming an extended zigzag chain. 
    more » « less
  5. ; ; (, Acta Crystallographica Section C Structural Chemistry)
    null (Ed.)
    The formation of a photoreactive cocrystal based upon 1,2-diiodoperchlorobenzene ( 1,2-C 6 I 2 Cl 4 ) and trans -1,2-bis(pyridin-4-yl)ethylene ( BPE ) has been achieved. The resulting cocrystal, 2( 1,2-C 6 I 2 Cl 4 )·( BPE ) or C 6 Cl 4 I 2 ·0.5C 12 H 10 N 2 , comprises planar sheets of the components held together by the combination of I...N halogen bonds and halogen–halogen contacts. Notably, the 1,2-C 6 I 2 Cl 4 molecules π-stack in a homogeneous and face-to-face orientation that results in an infinite column of the halogen-bond donor. As a consequence of this stacking arrangement and I...N halogen bonds, molecules of BPE also stack in this type of pattern. In particular, neighbouring ethylene groups in BPE are found to be parallel and within the accepted distance for a photoreaction. Upon exposure to ultraviolet light, the cocrystal undergoes a solid-state [2 + 2] cycloaddition reaction that produces rctt -tetrakis(pyridin-4-yl)cyclobutane ( TPCB ) with an overall yield of 89%. A solvent-free approach utilizing dry vortex grinding of the components also resulted in a photoreactive material with a similar yield. 
    more » « less
  • Citation Formats
  • MLA
  • APA
  • Chicago
  • BibTeX
  • Save / Share this Record
  • Send to Email