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1. Mapping Temperate Forest Phenology Using Tower, UAV, and Ground-Based Sensors

   https://doi.org/10.3390/drones4030056  

   Atkins, Jeff W.; Stovall, Atticus E.; Yang, Xi (September 2020, Drones)

   null (Ed.)

   Phenology is a distinct marker of the impacts of climate change on ecosystems. Accordingly, monitoring the spatiotemporal patterns of vegetation phenology is important to understand the changing Earth system. A wide range of sensors have been used to monitor vegetation phenology, including digital cameras with different viewing geometries mounted on various types of platforms. Sensor perspective, view-angle, and resolution can potentially impact estimates of phenology. We compared three different methods of remotely sensing vegetation phenology—an unoccupied aerial vehicle (UAV)-based, downward-facing RGB camera, a below-canopy, upward-facing hemispherical camera with blue (B), green (G), and near-infrared (NIR) bands, and a tower-based RGB PhenoCam, positioned at an oblique angle to the canopy—to estimate spring phenological transition towards canopy closure in a mixed-species temperate forest in central Virginia, USA. Our study had two objectives: (1) to compare the above- and below-canopy inference of canopy greenness (using green chromatic coordinate and normalized difference vegetation index) and canopy structural attributes (leaf area and gap fraction) by matching below-canopy hemispherical photos with high spatial resolution (0.03 m) UAV imagery, to find the appropriate spatial coverage and resolution for comparison; (2) to compare how UAV, ground-based, and tower-based imagery performed in estimating the timing of the spring phenological transition. We found that a spatial buffer of 20 m radius for UAV imagery is most closely comparable to below-canopy imagery in this system. Sensors and platforms agree within +/− 5 days of when canopy greenness stabilizes from the spring phenophase into the growing season. We show that pairing UAV imagery with tower-based observation platforms and plot-based observations for phenological studies (e.g., long-term monitoring, existing research networks, and permanent plots) has the potential to scale plot-based forest structural measures via UAV imagery, constrain uncertainty estimates around phenophases, and more robustly assess site heterogeneity. 

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2. Drone imagery protocols to map vegetation are transferable between dryland sites across an elevational gradient

   https://doi.org/10.1002/ecs2.4330  

   Roser, Anna; Enterkine, Josh; Requena‐Mullor, Juan M.; Glenn, Nancy F.; Boehm, Alex; de Graaff, Marie‐Anne; Clark, Patrick E.; Pierson, Fred; Caughlin, T. Trevor (December 2022, Ecosphere)

   Abstract The structure and composition of plant communities in drylands are highly variable across scales, from microsites to landscapes. Fine spatial resolution field surveys of dryland plants are essential to unravel the impact of climate change; however, traditional field data collection is challenging considering sampling efforts and costs. Unoccupied aerial systems (UAS) can alleviate this challenge by providing standardized measurements of plant community attributes with high resolution. However, given widespread heterogeneity in plant communities in drylands, and especially across environmental gradients, the transferability of UAS imagery protocols is unclear. Plant functional types (PFTs) are a classification scheme that aggregates the diversity of plant structure and function. We mapped and modeled PFTs and fractional photosynthetic cover using the same UAS imagery protocol across three dryland communities, differentiated by a landscape‐scale gradient of elevation and precipitation. We compared the accuracy of the UAS products between the three dryland sites. PFT classifications and modeled photosynthetic cover had highest accuracies at higher elevations (2241 m) with denser vegetation. The lowest site (1101 m), with more bare ground, had the least agreement with the field data. Notably, shrub cover was well predicted across the gradient of elevation and precipitation (~230–1100 mm/year). UAS surveys captured the heterogeneity of plant cover across sites and presented options to measure leaf‐level composition and structure at landscape levels. Our results demonstrate that some PFTs (i.e., shrubs) can readily be detected across sites using the same UAS imagery protocols, while others (i.e., grasses) may require site‐specific flight protocols for best accuracy. As UAS are increasingly used to monitor dryland vegetation, developing protocols that maximize information and efficiency is a research and management priority. 

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3. A high spatial resolution land surface phenology dataset for AmeriFlux and NEON sites

   https://doi.org/10.1038/s41597-022-01570-5  

   Moon, Minkyu; Richardson, Andrew D.; Milliman, Thomas; Friedl, Mark A. (July 2022, Scientific Data)

   Abstract Vegetation phenology is a key control on water, energy, and carbon fluxes in terrestrial ecosystems. Because vegetation canopies are heterogeneous, spatially explicit information related to seasonality in vegetation activity provides valuable information for studies that use eddy covariance measurements to study ecosystem function and land-atmosphere interactions. Here we present a land surface phenology (LSP) dataset derived at 3 m spatial resolution from PlanetScope imagery across a range of plant functional types and climates in North America. The dataset provides spatially explicit information related to the timing of phenophase changes such as the start, peak, and end of vegetation activity, along with vegetation index metrics and associated quality assurance flags for the growing seasons of 2017–2021 for 10 × 10 km windows centred over 104 eddy covariance towers at AmeriFlux and National Ecological Observatory Network (NEON) sites. These LSP data can be used to analyse processes controlling the seasonality of ecosystem-scale carbon, water, and energy fluxes, to evaluate predictions from land surface models, and to assess satellite-based LSP products. 

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4. Mapping tundra ecosystem plant functional type cover, height and aboveground biomass in Alaska and northwest Canada using unmanned aerial vehicles, 2018-2019

   https://doi.org/10.18739/A2R785Q5B  

   Orndahl, Kathleen (January 2022, Arctic Data Center)

   Arctic landscapes are rapidly changing with climate warming. Vegetation communities are restructuring, which in turn impacts wildlife, permafrost, carbon cycling and climate feedbacks. Accurately monitoring vegetation change is thus crucial, but notable mismatches in scale occur between current field and satellite-based monitoring. Remote sensing from unmanned aerial vehicles (UAVs) has emerged as a bridge between field data and satellite imagery mapping. In this work we assess the viability of using high resolution UAV imagery (RGB and multispectral), along with UAV derived Structure from Motion (SfM) to predict cover, height and above-ground biomass of common Arctic plant functional types (PFTs) across a wide range of vegetation community types. We collected field data and UAV imagery from 45 sites across Alaska and northwest Canada. We then classified UAV imagery by PFT, estimated cover and height, and modeled biomass from UAV-derived volume estimates. Here we present datasets summarizing this data. 

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5. Mapping tundra ecosystem plant functional type cover, height and aboveground biomass in Alaska and northwest Canada using unmanned aerial vehicles

   https://doi.org/10.1139/as-2021-0044  

   Orndahl, Kathleen M.; Ehlers, Libby P.; Herriges, Jim D.; Pernick, Rachel E.; Hebblewhite, Mark; Goetz, Scott J. (April 2022, Arctic Science)

   Arctic vegetation communities are rapidly changing with climate warming, which impacts wildlife, carbon cycling and climate feedbacks. Accurately monitoring vegetation change is thus crucial, but scale mismatches between field and satellite-based monitoring cause challenges. Remote sensing from unmanned aerial vehicles (UAVs) has emerged as a bridge between field data and satellite-based mapping. We assess the viability of using high resolution UAV imagery and UAV-derived Structure from Motion (SfM) to predict cover, height and aboveground biomass (henceforth biomass) of Arctic plant functional types (PFTs) across a range of vegetation community types. We classified imagery by PFT, estimated cover and height, and modeled biomass from UAV-derived volume estimates. Predicted values were compared to field estimates to assess results. Cover was estimated with root-mean-square error (RMSE) 6.29-14.2% and height was estimated with RMSE 3.29-10.5 cm, depending on the PFT. Total aboveground biomass was predicted with RMSE 220.5 g m^-2, and per-PFT RMSE ranged from 17.14-164.3 g m^-2. Deciduous and evergreen shrub biomass was predicted most accurately, followed by lichen, graminoid, and forb biomass. Our results demonstrate the effectiveness of using UAVs to map PFT biomass, which provides a link towards improved mapping of PFTs across large areas using earth observation satellite imagery. 

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