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1. The wild life of ticks: Using passive surveillance to determine the distribution and wildlife host range of ticks and the exotic Haemaphysalis longicornis, 2010–2021

   https://doi.org/10.1186/s13071-022-05425-1  

   Thompson, Alec T. ; White, Seth A. ; Doub, Emily E. ; Sharma, Prisha ; Frierson, Kenna ; Dominguez, Kristen ; Shaw, David ; Weaver, Dustin ; Vigil, Stacey L. ; Bonilla, Denise L. ; et al ( September 2022 , Parasites & Vectors)

   We conducted a large-scale, passive regional survey of ticks associated with wildlife of the eastern United States. Our primary goals were to better assess the current geographical distribution of exoticHaemaphysalis longicornisand to identify potential wild mammalian and avian host species. However, this large-scale survey also provided valuable information regarding the distribution and host associations for many other important tick species that utilize wildlife as hosts.

   Ticks were opportunistically collected by cooperating state and federal wildlife agencies. All ticks were placed in the supplied vials and host information was recorded, including host species, age, sex, examination date, location (at least county and state), and estimated tick burden. All ticks were identified to species using morphology, and suspectH. longicorniswere confirmed through molecular techniques.

   In total, 1940 hosts were examined from across 369 counties from 23 states in the eastern USA. From these submissions, 20,626 ticks were collected and identified belonging to 11 different species. Our passive surveillance efforts detected exoticH. longicornisfrom nine host species from eight states. Notably, some of the earliest detections ofH. longicornisin the USA were collected from wildlife through this passive surveillance network. In addition, numerous new county reports were generated forAmblyomma americanum,Amblyomma maculatum,Dermacentor albipictus,Dermacentor variabilis, andIxodes scapularis.

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   This study provided data on ticks collected from animals from 23 different states in the eastern USA between 2010 and 2021, with the primary goal of better characterizing the distribution and host associations of the exotic tickH. longicornis;however, new distribution data on tick species of veterinary or medical importance were also obtained. Collectively, our passive surveillance has detected numerous new county reports forH. longicornisas well asI. scapularis.Our study utilizing passive wildlife surveillance for ticks across the eastern USA is an effective method for surveying a diversity of wildlife host species, allowing us to better collect data on current tick distributions relevant to human and animal health.

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2. Filling the gap in distribution ranges and conservation status in Ctenomys (Rodentia: Ctenomyidae)

   https://doi.org/10.1093/jmammal/gyac099  

   Caraballo, Diego A. ; López, Sabrina Laura ; Botero-Cañola, Sebastián ; Gardner, Scott Lyell ; Hayes, ed., Loren ( January 2023 , Journal of Mammalogy)

   South American subterranean rodents of the genus Ctenomys (Rodentia, Ctenomyidae, tuco-tuco) are one of the most diverse genera among mammals. Recently described species, new taxonomic revisions, and new distribution range delimitation made the revision of distribution areas and conservation status of these mammals mandatory. Implementing the first part of the DAMA protocol (document, assess, monitor, act), here we compile updated sets of species distribution range maps and use these and the number of collection localities to assess the conservation status of ctenomyids. We integrate potential for conservation in protected areas, and levels of habitat transformation to revise previous conservation status assessments and propose the first assessment for all Data Deficient or not evaluated species of tuco-tucos. Our results indicate that 53 (78%) of these species are threatened and that 47 (69%) have little or no overlap with protected areas, emphasizing the urgent need to conduct conservation efforts. Here, 18 of 22 species previously classified as Data Deficient resulted in them being put in an at-risk category (VU, EN, CR). In addition, nine species that have not been previously evaluated were classified as threatened, with these two groups comprising more than 47% of the known species. These results posit thatmore »the Ctenomyidae are the rodent family with the greatest number of species at risk of extinction. Finally, a total of 33 (49%) species have been reported from three or fewer localities; all considered threatened through the approach implemented in this study. These geographically restricted taxa should be given more attention in conservation programs since the richness of this genus relies on the survival of such species.

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3. Effectiveness and design of marine protected areas for migratory species of conservation concern: A case study of post-nesting hawksbill turtles in Brazil.

   https://doi.org/https://doi.org/10.1016/j.biocon.2021.109229  

   Santos, A. J. ; Santos, E. A. ; Sales, G. ; Ramos, R. ; Vieira, D. H. ; Fuentes, M. M. ( January 2021 , Biological conservation)

   Marine protected areas (MPAs) are among the most widely used strategy to protect marine ecosystems and are typically designed to protect specific habitats rather than a single and/or multiple species. To inform the con- servation of species of conservation concern there is the need to assess whether existing and proposed MPA designs provide protection to these species. For this, information on species spatial distribution and exposure to threats is necessary. However, this information if often lacking, particularly for mobile migratory species, such as marine turtles. To highlight the importance of this information when designing MPAs and for assessments of their effectiveness, we identified high use areas of post-nesting hawksbill turtles (Eretmochelys imbricata) in Brazil as a case study and assessed the effectiveness of Brazilian MPAs to protect important habitat for this group based on exposure to threats. Most (88%) of high use areas were found to be exposed to threats (78% to artisanal fishery and 76.7% to marine traffic), where 88.1% were not protected by MPAs, for which 86% are exposed to threats. This mismatch is driven by a lack of explicit conservation goals and targets for turtles in MPA management plans, limited spatial information on species' distribution and threats,more »and a mismatch in the scale of conservation initiatives. To inform future assessments and design of MPAs for species of conservation concern we suggest that managers: clearly state and make their goals and targets tangible, consider ecological scales instead of political boundaries, and use adaptative management as new information become available.« less
4. Redesigning the Trading Zone between Systematics and Conservation: Insights from Malagasy mouse lemur classifications, 1982 to present

   https://doi.org/10.3897/biss.4.59234  

   Franz, Nico ; Sterner, Beckett ; Upham, Nathan ; Cortés Hernández, Kevin ( October 2020 , Biodiversity Information Science and Standards)

   Translating information between the domains of systematics and conservation requires novel information management designs. Such designs should improve interactions across the trading zone between the domains, herein understood as the model according to which knowledge and uncertainty are productively translated in both directions (cf. Collins et al. 2019). Two commonly held attitudes stand in the way of designing a well-functioning systematics-to-conservation trading zone. On one side, there are calls to unify the knowledge signal produced by systematics, underpinned by the argument that such unification is a necessary precondition for conservation policy to be reliably expressed and enacted (e.g., Garnett et al. 2020). As a matter of legal scholarship, the argument for systematic unity by legislative necessity is principally false (Weiss 2003, MacNeil 2009, Chromá 2011), but perhaps effective enough as a strategy to win over audiences unsure about robust law-making practices in light of variable and uncertain knowledge. On the other side, there is an attitude that conservation cannot ever restrict the academic freedom of systematics as a scientific discipline (e.g., Raposo et al. 2017). This otherwise sound argument misses the mark in the context of designing a productive trading zone with conservation. The central interactional challenge is not whethermore »the systematic knowledge can vary at a given time and/or evolve over time, but whether these signal dynamics are tractable in ways that actors can translate into robust maxims for conservation. Redesigning the trading zone should rest on the (historically validated) projection that systematics will continue to attract generations of inspired, productive researchers and broad-based societal support, frequently leading to protracted conflicts and dramatic shifts in how practioners in the field organize and identify organismal lineages subject to conservation. This confident outlook for systematics' future, in turn, should refocus the challenge of designing the trading zone as one of building better information services to model the concurrent conflicts and longer-term evolution of systematic knowledge. It would seem unreasonable to expect the International Union for Conservation of Nature (IUCN) Red List Index to develop better data science models for the dynamics of systematic knowledge (cf. Hoffmann et al. 2011) than are operational in the most reputable information systems designed and used by domain experts (Burgin et al. 2018). The reasonable challenge from conservation to systematics is not to stop being a science but to be a better data science. In this paper, we will review advances in biodiversity data science in relation to representing and reasoning over changes in systematic knowledge with computational logic, i.e., modeling systematic intelligence (Franz et al. 2016). We stress-test this approach with a use case where rapid systematic signal change and high stakes for conservation action intersect, i.e., the Malagasy mouse lemurs ( Microcebus É. Geoffroy, 1834 sec. Schüßler et al. 2020), where the number of recognized species-level concepts has risen from 2 to 25 in the span of 38 years (1982–2020). As much as scientifically defensible, we extend our modeling approach to the level of individual published occurrence records, where the inability to do so sometimes reflects substandard practice but more importantly reveals systemic inadequacies in biodiversity data science or informational modeling. In the absence of shared, sound theoretical foundations to assess taxonomic congruence or incongruence across treatments, and in the absence of biodiversity data platforms capable of propagating logic-enabled, scalable occurrence-to-concept identification events to produce alternative and succeeding distribution maps, there is no robust way to provide a knowledge signal from systematics to conservation that is both consistent in its syntax and acccurate in its semantics, in the sense of accurately reflecting the variation and uncertainty that exists across multiple systematic perspectives. Translating this diagnosis into new designs for the trading zone is only one "half" of the solution, i.e., a technical advancement that then would need to be socially endorsed and incentivized by systematic and conservation communities motivated to elevate their collaborative interactions and trade robustly in inherently variable and uncertain information.« less
5. Phylogenetic Systematics and Evolution of the Spider Infraorder Mygalomorphae Using Genomic Scale Data

   https://doi.org/10.1093/sysbio/syz064  

   Opatova, Vera ; Hamilton, Chris A. ; Hedin, Marshal ; De Oca, Laura Montes ; Král, Jiři ; Bond, Jason E. ; Wiegmann, ed., Brian ( December 2019 , Systematic Biology)

   The infraorder Mygalomorphae is one of the three main lineages of spiders comprising over 3000 nominal species. This ancient group has a worldwide distribution that includes among its ranks large and charismatic taxa such as tarantulas, trapdoor spiders, and highly venomous funnel-web spiders. Based on past molecular studies using Sanger-sequencing approaches, numerous mygalomorph families (e.g., Hexathelidae, Ctenizidae, Cyrtaucheniidae, Dipluridae, and Nemesiidae) have been identified as non-monophyletic. However, these data were unable to sufficiently resolve the higher-level (intra- and interfamilial) relationships such that the necessary changes in classification could be made with confidence. Here, we present a comprehensive phylogenomic treatment of the spider infraorder Mygalomorphae. We employ 472 loci obtained through anchored hybrid enrichment to reconstruct relationships among all the mygalomorph spider families and estimate the timeframe of their diversification. We sampled nearly all currently recognized families, which has allowed us to assess their status, and as a result, propose a new classification scheme. Our generic-level sampling has also provided an evolutionary framework for revisiting questions regarding silk use in mygalomorph spiders. The first such analysis for the group within a strict phylogenetic framework shows that a sheet web is likely the plesiomorphic condition for mygalomorphs, as well as providingmore »insights to the ancestral foraging behavior for all spiders. Our divergence time estimates, concomitant with detailed biogeographic analysis, suggest that both ancient continental-level vicariance and more recent dispersal events have played an important role in shaping modern day distributional patterns. Based on our results, we relimit the generic composition of the Ctenizidae, Cyrtaucheniidae, Dipluridae, and Nemesiidae. We also elevate five subfamilies to family rank: Anamidae (NEW RANK), Euagridae (NEW RANK), Ischnothelidae (NEW RANK), Pycnothelidae (NEW RANK), and Bemmeridae (NEW RANK). Three families Entypesidae (NEW FAMILY), Microhexuridae (NEW FAMILY), and Stasimopidae (NEW FAMILY), and one subfamily Australothelinae (NEW SUBFAMILY) are newly proposed. Such a major rearrangement in classification, recognizing nine newly established family-level rank taxa, is the largest the group has seen in over three decades. [Biogeography; molecular clocks; phylogenomics; spider web foraging; taxonomy.]

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