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Deep generative models have enabled the automated synthesis of high-quality data for diverse applications. However, the most effective generative models are specialized to data from a single domain (e.g., images or text). Real-world applications such as healthcare require multi-modal data from multiple domains (e.g., both images and corresponding text), which are difficult to acquire due to limited availability and privacy concerns and are much harder to synthesize. To tackle this joint synthesis challenge, we propose an End-to-end MultImodal X-ray genERative model (EMIXER) for jointly synthesizing x-ray images and corresponding free-text reports, all conditional on diagnosis labels. EMIXER is an conditional generative adversarial model by 1) generating an image based on a label, 2) encoding the image to a hidden embedding, 3) producing the corresponding text via a hierarchical decoder from the image embedding, and 4) a joint discriminator for assessing both the image and the corresponding text. EMIXER also enables self-supervision to leverage vast amount of unlabeled data. Extensive experiments with real X-ray reports data illustrate how data augmentation using synthesized multimodal samples can improve the performance of a variety of supervised tasks including COVID-19 X-ray classification with very limited samples. The quality of generated images and reports are also confirmed by radiologists. We quantitatively show that EMIXER generated synthetic datasets can augment X-ray image classification, report generation models to achieve 5.94% and 6.9% improvement on models trained only on real data samples. Taken together, our results highlight the promise of state of generative models to advance clinical machine learning.
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Text Generation to Aid Depression Detection: A Comparative Study of Conditional Sequence Generative Adversarial Networks
Corpuses of unstructured textual data, such as text messages between individuals, are often predictive of medical issues such as depression. The text data usually used in healthcare applications has high value and great variety, but is typically small in volume. Generating labeled unstructured text data is important to improve models by augmenting these small datasets, as well as to facilitate anonymization. While methods for labeled data generation exist, not all of them generalize well to small datasets. In this work, we thus perform a much needed systematic comparison of conditional text generation models that are promising for small datasets due to their unified architectures. We identify and implement a family of nine conditional sequence generative adversarial networks for text generation, which we collectively refer to as cSeqGAN models. These models are characterized along two orthogonal design dimensions: weighting strategies and feedback mechanisms. We conduct a comparative study evaluating the generation ability of the nine cSeqGAN models on three diverse text datasets with depression and sentiment labels. To assess the quality and realism of the generated text, we use standard machine learning metrics as well as human assessment via a user study. While the unconditioned models produced predictive text, the cSeqGAN models produced more realistic text. Our comparative study lays a solid foundation and provides important insights for further text generation research, particularly for the small datasets common within the healthcare domain.
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- Award ID(s):
- 1852498
- PAR ID:
- 10399254
- Date Published:
- Journal Name:
- 2022 IEEE International Conference on Big Data (Big Data)
- Page Range / eLocation ID:
- 2804 to 2813
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Conference Paper:
- https://doi.org/10.1109/BigData55660.2022.10020224
