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1. Topology and Local Geometry of the Eden Model

   https://doi.org/10.1007/s00454-022-00474-w  

   Manin, Fedor ; Roldán, Érika ; Schweinhart, Benjamin ( February 2023 , Discrete & Computational Geometry)

   The Eden cell growth model is a simple discrete stochastic process which produces a “blob” (aggregation of cells) in $$\mathbb {R}^d$$$R^d$: start with one cube in the regular grid, and at each time step add a neighboring cube uniformly at random. This process has been used as a model for the growth of aggregations, tumors, and bacterial colonies and the healing of wounds, among other natural processes. Here, we study the topology and local geometry of the resulting structure, establishing asymptotic bounds for Betti numbers. Our main result is that the Betti numbers at timetgrow at a rate between$$t^{(d-1)/d}$$$t^{(d-1)/d}$and$$P_d(t)$$$P_d\left(t\right)$, where$$P_d(t)$$$P_d\left(t\right)$is the size of the site perimeter. Assuming a widely believed conjecture, this establishes the rate of growth of the Betti numbers in every dimension. We also present the results of computational experiments on finer aspects of the geometry and topology, such as persistent homology and the distribution of shapes of holes.

    

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2. eGHWT: The Extended Generalized Haar–Walsh Transform

   https://doi.org/10.1007/s10851-021-01064-w  

   Saito, Naoki ; Shao, Yiqun ( January 2022 , Journal of Mathematical Imaging and Vision)

   Extending computational harmonic analysis tools from the classical setting of regular lattices to the more general setting of graphs and networks is very important, and much research has been done recently. The generalized Haar–Walsh transform (GHWT) developed by Irion and Saito (2014) is a multiscale transform for signals on graphs, which is a generalization of the classical Haar and Walsh–Hadamard transforms. We propose theextendedgeneralized Haar–Walsh transform (eGHWT), which is a generalization of the adapted time–frequency tilings of Thiele and Villemoes (1996). The eGHWT examines not only the efficiency of graph-domain partitions but also that of “sequency-domain” partitionssimultaneously. Consequently, the eGHWT and its associated best-basis selection algorithm for graph signals significantly improve the performance of the previous GHWT with the similar computational cost,$$O(N \log N)$$$O(NlogN)$, whereNis the number of nodes of an input graph. While the GHWT best-basis algorithm seeks the most suitable orthonormal basis for a given task among more than$$(1.5)^N$$${\left(1.5\right)}^N$possible orthonormal bases in$$\mathbb {R}^N$$$R^N$, the eGHWT best-basis algorithm can find a better one by searching through more than$$0.618\cdot (1.84)^N$$$0.618·{\left(1.84\right)}^N$possible orthonormal bases in$$\mathbb {R}^N$$$R^N$. This article describes the details of the eGHWT best-basis algorithm and demonstrates its superiority using several examples including genuine graph signals as well as conventional digital images viewed as graph signals. Furthermore, we also show how the eGHWT can be extended to 2D signals and matrix-form data by viewing them as a tensor product of graphs generated from their columns and rows and demonstrate its effectiveness on applications such as image approximation.

    

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3. From approximate to exact integer programming

   https://doi.org/10.1007/s10107-024-02084-1  

   Dadush, Daniel ; Eisenbrand, Friedrich ; Rothvoss, Thomas ( April 2024 , Mathematical Programming)

   Approximate integer programming is the following: For a given convex body$$K \subseteq {\mathbb {R}}^n$$$K\subseteq R^n$, either determine whether$$K \cap {\mathbb {Z}}^n$$$K\cap Z^n$is empty, or find an integer point in the convex body$$2\cdot (K - c) +c$$$2·(K-c)+c$which isK, scaled by 2 from its center of gravityc. Approximate integer programming can be solved in time$$2^{O(n)}$$$2^{O\left(n\right)}$while the fastest known methods for exact integer programming run in time$$2^{O(n)} \cdot n^n$$$2^{O\left(n\right)}·n^n$. So far, there are no efficient methods for integer programming known that are based on approximate integer programming. Our main contribution are two such methods, each yielding novel complexity results. First, we show that an integer point$$x^* \in (K \cap {\mathbb {Z}}^n)$$$x^{\ast }\in (K\cap Z^n)$can be found in time$$2^{O(n)}$$$2^{O\left(n\right)}$, provided that theremaindersof each component$$x_i^* \mod \ell $$$x_i^{\ast }mod\ell$for some arbitrarily fixed$$\ell \ge 5(n+1)$$$\ell \ge 5(n+1)$of$$x^*$$$x^{\ast }$are given. The algorithm is based on acutting-plane technique, iteratively halving the volume of the feasible set. The cutting planes are determined via approximate integer programming. Enumeration of the possible remainders gives a$$2^{O(n)}n^n$$$2^{O\left(n\right)}{n}^n$algorithm for general integer programming. This matches the current best bound of an algorithm by Dadush (Integer programming, lattice algorithms, and deterministic, vol. Estimation. Georgia Institute of Technology, Atlanta, 2012) that is considerably more involved. Our algorithm also relies on a newasymmetric approximate Carathéodory theoremthat might be of interest on its own. Our second method concerns integer programming problems in equation-standard form$$Ax = b, 0 \le x \le u, \, x \in {\mathbb {Z}}^n$$$Ax=b,0\le x\le u,x\in Z^n$. Such a problem can be reduced to the solution of$$\prod _i O(\log u_i +1)$$${\prod }_{i}O(log{u}_i+1)$approximate integer programming problems. This implies, for example thatknapsackorsubset-sumproblems withpolynomial variable range$$0 \le x_i \le p(n)$$$0\le x_i\le p\left(n\right)$can be solved in time$$(\log n)^{O(n)}$$${(logn)}^{O\left(n\right)}$. For these problems, the best running time so far was$$n^n \cdot 2^{O(n)}$$$n^n·2^{O\left(n\right)}$.

    

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4. Green function estimates on complements of low-dimensional uniformly rectifiable sets

   https://doi.org/10.1007/s00208-022-02379-8  

   David, Guy ; Feneuil, Joseph ; Mayboroda, Svitlana ( March 2022 , Mathematische Annalen)

   It has been recently established in David and Mayboroda (Approximation of green functions and domains with uniformly rectifiable boundaries of all dimensions.arXiv:2010.09793) that on uniformly rectifiable sets the Green function is almost affine in the weak sense, and moreover, in some scenarios such Green function estimates are equivalent to the uniform rectifiability of a set. The present paper tackles a strong analogue of these results, starting with the “flagship degenerate operators on sets with lower dimensional boundaries. We consider the elliptic operators$$L_{\beta ,\gamma } =- {\text {div}}D^{d+1+\gamma -n} \nabla $$$L_{\beta ,\gamma }=-\text{div}{D}^{d+1+\gamma -n}\nabla$associated to a domain$$\Omega \subset {\mathbb {R}}^n$$$\Omega \subset R^n$with a uniformly rectifiable boundary$$\Gamma $$$\Gamma$of dimension$$d < n-1$$$d<n-1$, the now usual distance to the boundary$$D = D_\beta $$$D=D_{\beta }$given by$$D_\beta (X)^{-\beta } = \int _{\Gamma } |X-y|^{-d-\beta } d\sigma (y)$$$D_{\beta }{\left(X\right)}^{-\beta }={\int }_{\Gamma }{|X-y|}^{-d-\beta }d\sigma \left(y\right)$for$$X \in \Omega $$$X\in \Omega$, where$$\beta >0$$$\beta >0$and$$\gamma \in (-1,1)$$$\gamma \in (-1,1)$. In this paper we show that the Green functionGfor$$L_{\beta ,\gamma }$$$L_{\beta ,\gamma }$, with pole at infinity, is well approximated by multiples of$$D^{1-\gamma }$$$D^{1-\gamma }$, in the sense that the function$$\big | D\nabla \big (\ln \big ( \frac{G}{D^{1-\gamma }} \big )\big )\big |^2$$$|D\nabla (ln(\frac{G}{D^{1-\gamma }})){|}^2$satisfies a Carleson measure estimate on$$\Omega $$$\Omega$. We underline that the strong and the weak results are different in nature and, of course, at the level of the proofs: the latter extensively used compactness arguments, while the present paper relies on some intricate integration by parts and the properties of the “magical distance function from David et al. (Duke Math J, to appear).

    

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5. Improved Merlin–Arthur Protocols for Central Problems in Fine-Grained Complexity

   https://doi.org/10.1007/s00453-023-01102-6  

   Akmal, Shyan ; Chen, Lijie ; Jin, Ce ; Raj, Malvika ; Williams, Ryan ( February 2023 , Algorithmica)

   In a Merlin–Arthur proof system, the proof verifier (Arthur) accepts valid proofs (from Merlin) with probability 1, and rejects invalid proofs with probability arbitrarily close to 1. The running time of such a system is defined to be the length of Merlin’s proof plus the running time of Arthur. We provide new Merlin–Arthur proof systems for some key problems in fine-grained complexity. In several cases our proof systems have optimal running time. Our main results include:

   Certifying that a list ofnintegers has no 3-SUM solution can be done in Merlin–Arthur time$$\tilde{O}(n)$$$\tilde{O}\left(n\right)$. Previously, Carmosino et al. [ITCS 2016] showed that the problem has a nondeterministic algorithm running in$$\tilde{O}(n^{1.5})$$$\tilde{O}\left(n^{1.5}\right)$time (that is, there is a proof system with proofs of length$$\tilde{O}(n^{1.5})$$$\tilde{O}\left(n^{1.5}\right)$and a deterministic verifier running in$$\tilde{O}(n^{1.5})$$$\tilde{O}\left(n^{1.5}\right)$time).

   Counting the number ofk-cliques with total edge weight equal to zero in ann-node graph can be done in Merlin–Arthur time$${\tilde{O}}(n^{\lceil k/2\rceil })$$$\tilde{O}\left(n^{\lceil k/2\rceil }\right)$(where$$k\ge 3$$$k\ge 3$). For oddk, this bound can be further improved for sparse graphs: for example, counting the number of zero-weight triangles in anm-edge graph can be done in Merlin–Arthur time$${\tilde{O}}(m)$$$\tilde{O}\left(m\right)$. Previous Merlin–Arthur protocols by Williams [CCC’16] and Björklund and Kaski [PODC’16] could only countk-cliques in unweighted graphs, and had worse running times for smallk.

   Computing the All-Pairs Shortest Distances matrix for ann-node graph can be done in Merlin–Arthur time$$\tilde{O}(n^2)$$$\tilde{O}\left(n^2\right)$. Note this is optimal, as the matrix can have$$\Omega (n^2)$$$\Omega \left(n^2\right)$nonzero entries in general. Previously, Carmosino et al. [ITCS 2016] showed that this problem has an$$\tilde{O}(n^{2.94})$$$\tilde{O}\left(n^{2.94}\right)$nondeterministic time algorithm.

   Certifying that ann-variablek-CNF is unsatisfiable can be done in Merlin–Arthur time$$2^{n/2 - n/O(k)}$$$2^{n/2-n/O\left(k\right)}$. We also observe an algebrization barrier for the previous$$2^{n/2}\cdot \textrm{poly}(n)$$$2^{n/2}·\text{poly}\left(n\right)$-time Merlin–Arthur protocol of R. Williams [CCC’16] for$$\#$$$\#$SAT: in particular, his protocol algebrizes, and we observe there is no algebrizing protocol fork-UNSAT running in$$2^{n/2}/n^{\omega (1)}$$$2^{n/2}/n^{\omega \left(1\right)}$time. Therefore we have to exploit non-algebrizing properties to obtain our new protocol.

   Certifying a Quantified Boolean Formula is true can be done in Merlin–Arthur time$$2^{4n/5}\cdot \textrm{poly}(n)$$$2^{4n/5}·\text{poly}\left(n\right)$. Previously, the only nontrivial result known along these lines was an Arthur–Merlin–Arthur protocol (where Merlin’s proof depends on some of Arthur’s coins) running in$$2^{2n/3}\cdot \textrm{poly}(n)$$$2^{2n/3}·\text{poly}\left(n\right)$time.

   Due to the centrality of these problems in fine-grained complexity, our results have consequences for many other problems of interest. For example, our work implies that certifying there is no Subset Sum solution tonintegers can be done in Merlin–Arthur time$$2^{n/3}\cdot \textrm{poly}(n)$$$2^{n/3}·\text{poly}\left(n\right)$, improving on the previous best protocol by Nederlof [IPL 2017] which took$$2^{0.49991n}\cdot \textrm{poly}(n)$$$2^{0.49991n}·\text{poly}\left(n\right)$time.

    

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