An official website of the United States government
Abstract Root hairs are considered important for rhizosphere formation, which affects root system functioning. Through interactions with soil microorganisms mediated by root exudation, root hairs may affect the phenotypes and growth of young plants. We tested this hypothesis by integrating results from two experiments: (1) a factorial greenhouse seedling experiment withZea mays B73‐wtand its root‐hairless mutant,B73‐rth3, grown in live and autoclaved soil, quantifying 15 phenotypic traits, seven growth rates, and soil microbiomes and (2) a semi‐hydroponic system quantifying root exudation of maize genotypes. Possibly as compensation for lacking root hairs,B73‐rth3seedlings allocated more biomass to roots and grew slower thanB73‐wtseedlings in live soil, whereasB73‐wtseedlings grew slowest in autoclaved soil, suggesting root hairs can be costly and their benefits were realized with more complete soil microbial assemblages. There were substantial differences in root exudation between genotypes and in rhizosphere versus non‐rhizosphere microbiomes. The microbial taxa enriched in the presence of root hairs generally enhanced growth compared to taxa enriched in their absence. Our findings suggest the root hairs' adaptive value extends to plant‐microbe interactions mediated by root exudates, affecting plant phenotypes, and ultimately, growth.
more »
« less
Barren to green in a single application: Revitalizing brownfield soil with simulated root exudates
Barren, metal-contaminated soils lack plants and root exudate inputs, exhibit low microbial abundance and functioning, and often require soil revitalization to revegetate. While the effects of simulated root exudates (SRE) have been investigated in uncontaminated, vegetated soils, their potential for remediating post-industrial barren, contaminated soils has not been examined or leveraged. We asked whether priming brownfield soils with a laboratory-prepared SRE solution stimulates native soil microbial metabolism and functioning and how long the effects last. Moreover, we compared a cost-effective single SRE addition to repeated SRE additions. We collected soils from a metal-contaminated, abandoned industrial rail yard (barren and vegetated sites) and a vegetated agricultural reference site, established microcosms, and treated the soils with either a single or repeated SRE addition/s. By day 30, SRE-enriched barren, brownfield soils showed significantly higher soil respiration rates than the untreated control soils. Phosphatase activities were significantly higher even 210 days after a single SRE addition. Plants were introduced 282 days after the single SRE addition. The average shoot height (16 ± 0.3 cm) and total plant biomass (0.5 ± 0.02 g) of plants grown in single addition SRE enriched barren soil were significantly higher than the controls (9 ± 0.9 cm and 0.3 ± 0.02 g, respectively). The increased soil microbial functioning and productivity indicate that a single SRE application holds promise as a field-ready technology to revitalize barren, poorly functioning brownfield soils. SRE application may also be a pragmatic and innovative approach to enable successful phytoremediation and re-greening of industrial barrens.
more »
« less
- PAR ID:
- 10531384
- Publisher / Repository:
- Elsevier
- Date Published:
- Journal Name:
- Environmental Technology & Innovation
- Volume:
- 36
- Issue:
- C
- ISSN:
- 2352-1864
- Page Range / eLocation ID:
- 103735
- Subject(s) / Keyword(s):
- Root exudates Phytoremediation Heavy metals Brownfield Soil microbial activity Soil respiration
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Abstract Flooding and salinization triggered by storm surges threaten the survival of coastal forests. After a storm surge event, soil salinity can increase by evapotranspiration or decrease by rainfall dilution. Here we used a 1D hydrological model to study the combined effect of evapotranspiration and rainfall on coastal vegetated areas. Our results shed light on tree root uptake and salinity infiltration feedback as a function of soil characteristics. As evaporation increases from 0 to 2.5 mm/day, soil salinity reaches 80 ppt in both sandy and clay loam soils in the first 5 cm of soil depth. Transpiration instead involves the root zone located in the first 40 cm of depth, affecting salinization in a complex way. In sandy loam soils, storm surge events homogeneously salinize the root zone, while in clay loam soils salinization is stratified, partially affecting tree roots. Soil salinity stratification combined with low permeability maintain root uptakes in clay loam soils 4/5‐time higher with respect to sandy loam ones. When cumulative rainfall is larger than potential evapotranspiration ETp(ETp/Rainfall ratios lower than 1), dilution promotes fast recovery to pre‐storm soil salinity conditions, especially in sandy loam soils. Field data collected after two storm surge events support the results obtained. Electrical conductivity (a proxy for salinity) increases when the ratio ETp/Rainfall is around 1.76, while recovery occurs when the ratio is around 0.92. In future climate change scenarios with higher temperatures and storm‐surge frequency, coastal vegetation will be compromised, because of soil salinity values much higher than tolerable thresholds.more » « less
-
Abstract. Phytoremediation can be a cost-effective method of restoring contaminated soils using plants and associated microorganisms. Most studies follow the impacts of phytoremediation solely across the treatment period and have not explored long-term ecological effects. In 1995, a phytoremediation study was initiated near Fairbanks, Alaska, to determine how the introduction of annual grasses and/or fertilizer would influence degradation of petroleum hydrocarbons (PHCs). After 1 year, grass and/or fertilizer-treated soils showed greater decreases in PHC concentrations compared to untreated plots. The site was then left for 15 years with no active site management. In 2011, we re-examined the site to explore the legacy of phytoremediation on contaminant disappearance, as well as on plant and soil microbial ecology. We found that the recruited vegetation and the current bulk soil microbial community structure and functioning were all heavily influenced by initial phytoremediation treatment. The number of diesel-degrading microorganisms (DDMs) was positively correlated with the percentage cover of vegetation at the site, which was influenced by initial treatment. Even 15 years later, the initial use of fertilizer had significant effects on microbial biomass, community structure, and activity. We conclude that phytoremediation treatment has long-term, legacy effects on the plant community, which, in turn, impact microbial community structure and functioning. It is therefore important to consider phytoremediation strategies that not only influence site remediation rates in the short-term but also prime the site for the restoration of vegetation over the long-term.more » « less
-
Veach, Allison (Ed.)ABSTRACT Heavy metals (HMs) are known to modify bacterial communities both in the laboratory and in situ . Consequently, soils in HM-contaminated sites such as the U.S. Environmental Protection Agency (EPA) Superfund sites are predicted to have altered ecosystem functioning, with potential ramifications for the health of organisms, including humans, that live nearby. Further, several studies have shown that heavy metal-resistant (HMR) bacteria often also display antimicrobial resistance (AMR), and therefore HM-contaminated soils could potentially act as reservoirs that could disseminate AMR genes into human-associated pathogenic bacteria. To explore this possibility, topsoil samples were collected from six public locations in the zip code 35207 (the home of the North Birmingham 35th Avenue Superfund Site) and in six public areas in the neighboring zip code, 35214. 35027 soils had significantly elevated levels of the HMs As, Mn, Pb, and Zn, and sequencing of the V4 region of the bacterial 16S rRNA gene revealed that elevated HM concentrations correlated with reduced microbial diversity and altered community structure. While there was no difference between zip codes in the proportion of total culturable HMR bacteria, bacterial isolates with HMR almost always also exhibited AMR. Metagenomes inferred using PICRUSt2 also predicted significantly higher mean relative frequencies in 35207 for several AMR genes related to both specific and broad-spectrum AMR phenotypes. Together, these results support the hypothesis that chronic HM pollution alters the soil bacterial community structure in ecologically meaningful ways and may also select for bacteria with increased potential to contribute to AMR in human disease. IMPORTANCE Heavy metals cross-select for antimicrobial resistance in laboratory experiments, but few studies have documented this effect in polluted soils. Moreover, despite decades of awareness of heavy metal contamination at the EPA Superfund site in North Birmingham, Alabama, this is the first analysis of the impact of this pollution on the soil microbiome. Specifically, this work advances the understanding of the relationship between heavy metals, microbial diversity, and patterns of antibiotic resistance in North Birmingham soils. Our results suggest that polluted soils carry a risk of increased exposure to antibiotic-resistant infections in addition to the direct health consequences of heavy metals. Our work provides important information relevant to both political and scientific efforts to advance environmental justice for the communities that call Superfund neighborhoods home.more » « less
-
ABSTRACT Labile carbon (C) inputs in soils are expected to increase in the future due to global change drivers such as elevated atmospheric CO2concentrations or warming and potential increases in plant primary productivity. However, the role of mycorrhizal association in modulating microbial activity and soil organic matter (SOM) biogeochemistry responses to increasing below‐ground C inputs remains unclear. We employed18O–H2O quantitative stable isotope probing to investigate the effects of synthetic root exudate addition (0, 250, 500, and 1000 μg C g soil−1) on bacterial growth traits and SOM biogeochemistry in rhizosphere soils of trees associated with arbuscular mycorrhizal (AM) and ectomycorrhizal (ECM) fungi. Soil respiration increased proportionally to the amount of exudate addition in both AM and ECM soils. However, microbial biomass C (MBC) responses differed, increasing in AM and decreasing in ECM soils. In AM soils, exudate addition increased taxon‐specific and community‐wide relative growth rates of bacteria, leading to enhanced biomass production. Conversely, in ECM soils, relative growth rates were less responsive to exudate addition, and estimates of MBC mortality increased with increasing exudate addition. In the AM soils, aggregated bacterial growth traits were predictive of soil respiration, but this relationship was not observed in ECM soils, perhaps due to substantial MBC mortality. These findings highlight the distinct responses of bacterial communities in AM and ECM rhizosphere soils to exudate addition. Considering that microbial products contribute to the formation of stable soil organic carbon (SOC) pools, future increases in labile exudate release in response to global change may consequently lead to greater SOC gains in AM soils compared to ECM soils.more » « less
