skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.


Title: TAPA: A Scalable Task-parallel Dataflow Programming Framework for Modern FPGAs with Co-optimization of HLS and Physical Design
In this article, we propose TAPA, an end-to-end framework that compiles a C++ task-parallel dataflow program into a high-frequency FPGA accelerator. Compared to existing solutions, TAPA has two major advantages. First, TAPA provides a set of convenient APIs that allows users to easily express flexible and complex inter-task communication structures. Second, TAPA adopts a coarse-grained floorplanning step during HLS compilation for accurate pipelining of potential critical paths. In addition, TAPA implements several optimization techniques specifically tailored for modern HBM-based FPGAs. In our experiments with a total of 43 designs, we improve the average frequency from 147 MHz to 297 MHz (a 102% improvement) with no loss of throughput and a negligible change in resource utilization. Notably, in 16 experiments, we make the originally unroutable designs achieve 274 MHz, on average. The framework is available athttps://github.com/UCLA-VAST/tapaand the core floorplan module is available athttps://github.com/UCLA-VAST/AutoBridge  more » « less
Award ID(s):
1937599
PAR ID:
10550474
Author(s) / Creator(s):
; ; ; ; ; ; ; ; ; ; ;
Publisher / Repository:
ACM Transactions on Reconfigurable Technology and Systems
Date Published:
Journal Name:
ACM Transactions on Reconfigurable Technology and Systems
Volume:
16
Issue:
4
ISSN:
1936-7406
Page Range / eLocation ID:
1 to 31
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract Spatial transcriptomics (ST) technologies enable high throughput gene expression characterization within thin tissue sections. However, comparing spatial observations across sections, samples, and technologies remains challenging. To address this challenge, we develop STalign to align ST datasets in a manner that accounts for partially matched tissue sections and other local non-linear distortions using diffeomorphic metric mapping. We apply STalign to align ST datasets within and across technologies as well as to align ST datasets to a 3D common coordinate framework. We show that STalign achieves high gene expression and cell-type correspondence across matched spatial locations that is significantly improved over landmark-based affine alignments. Applying STalign to align ST datasets of the mouse brain to the 3D common coordinate framework from the Allen Brain Atlas, we highlight how STalign can be used to lift over brain region annotations and enable the interrogation of compositional heterogeneity across anatomical structures. STalign is available as an open-source Python toolkit athttps://github.com/JEFworks-Lab/STalignand as Supplementary Software with additional documentation and tutorials available athttps://jef.works/STalign. 
    more » « less
  2. Abstract Summarydadi is a popular software package for inferring models of demographic history and natural selection from population genomic data. But using dadi requires Python scripting and manual parallelization of optimization jobs. We developed dadi-cli to simplify dadi usage and also enable straighforward distributed computing. Availability and Implementationdadi-cli is implemented in Python and released under the Apache License 2.0. The source code is available athttps://github.com/xin-huang/dadi-cli. dadi-cli can be installed via PyPI and conda, and is also available through Cacao on Jetstream2https://cacao.jetstream-cloud.org/. 
    more » « less
  3. Clustering is a fundamental task in machine learning. One of the most successful and broadly used algorithms is DBSCAN, a density-based clustering algorithm. DBSCAN requires ϵ-nearest neighbor graphs of the input dataset, which are computed with range-search algorithms and spatial data structures like KD-trees. Despite many efforts to design scalable implementations for DBSCAN, existing work is limited to low-dimensional datasets, as constructing ϵ-nearest neighbor graphs can be expensive in high-dimensions. This article introduces a modified DBSCAN, usingk-nearest neighbor (kNN) graphs to improve efficiency. We outline conditions forkNN-DBSCAN to match DBSCAN’s results and present a parallel implementation using OpenMP and MPI for shared and distributed memory systems. Testing on datasets up to 32 dimensions, we achieve remarkable scalability. Our implementation clusters one billion 3D points in under one second on 28K cores at TACC’s Frontera system. In a larger run, we cluster 65 billion points in 20 dimensions in under 40 seconds using 114,688 cores. Our method is up to 37× faster than state-of-the-art parallel DBSCAN on a 20-dimensional dataset with 4 million points. Code is available athttps://github.com/ut-padas/knndbscan. 
    more » « less
  4. Abstract We present Atacama Cosmology Telescope (ACT) Data Release 6 (DR6) maps of the Cosmic Microwave Background temperature and polarization anisotropy at arcminute resolution over three frequency bands centered on 98, 150 and 220 GHz. The maps are based on data collected with the AdvancedACT camera over the period 2017–2022 and cover 19,000 square degrees with a median combined depth of 10 μK arcmin. We describe the instrument, mapmaking and map properties and illustrate them with a number of figures and tables. The ACT DR6 maps and derived products are available on LAMBDA athttps://lambda.gsfc.nasa.gov/product/act/actadv_prod_table.html. We also provide an interactive web atlas athttps://phy-act1.princeton.edu/public/snaess/actpol/dr6/atlasand HiPS data sets in Aladin (e.g.https://alasky.cds.unistra.fr/ACT/DR4DR6/color_CMB). 
    more » « less
  5. Abstract Autonomous robots are increasingly deployed for long-term information-gathering tasks, which pose two key challenges: planning informative trajectories in environments that evolve across space and time, and ensuring persistent operation under energy constraints. This paper presents a unified framework, , that addresses both challenges through adaptive ergodic search and energy-aware scheduling in multi-robot systems. Our contributions are two-fold: (1) we model real-world variability using stochastic spatiotemporal environments, where the underlying information evolves continuously over space and time under process noise. To guide exploration, we construct a target information spatial distribution (TISD) based on clarity, a metric that captures the decay of information in the absence of observations and highlights regions of high uncertainty; and (2) we introduce ( ), an online scheduling method that enables persistent operation by coordinating rechargeable robots sharing a single mobile charging station. Unlike prior work, our approach avoids reliance on preplanned schedules, static or dedicated charging stations, and simplified robot dynamics. Instead, the scheduler supports general nonlinear models, accounts for uncertainty in the estimated position of the charging station, and handles central node failures. The proposed framework is validated through real-world hardware experiments, and feasibility guarantees are provided under specific assumptions.[Code: https://github.com/kalebbennaveed/mEclares-main.git][Experiment Video: https://www.youtube.com/watch?v=dmaZDvxJgF8] 
    more » « less