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The infraorder Astacidea, comprising marine clawed lobsters and freshwater crayfish, include some of the most recognizable decapod crustaceans, many being harvested commercially for human consumption and aquaculture. While molecular analyses have elucidated relationships among extant lineages, the composition and placement of several fossil groups within Astacidea remain poorly resolved, with several conflicting phylogenetic hypotheses and taxonomic classifications being proposed in previous works. Among these controversial groups, Erymoidea have variably been placed in Astacidea or Glypheidea, a largely extinct infraorder of predominantly pseudochelate marine lobsters. Cladistic relationships of Stenochiroidea have also been problematic, having been regarded as ancestral to freshwater crayfish (Astacida) or extant marine lobsters (Nephropidae). Failure to reach a consensus regarding these groups can be at least partially attributed to the prevalence of morphological convergence and limited taxon sampling. To clarify evolutionary relationships among fossil and extant taxa, a Bayesian phylogenetic analysis of morphological and molecular data (mitochondrial genes: 12S, 16S and COI; nuclear genes: 18S, 28S and H3) was performed that included extensive taxon sampling of all currently recognized families of Astacidea as well as representatives of several potential sister groups. To overcome error introduced by homoplasy, relationships among extant taxa, as revealed by previous molecular analyses, were used to identify morphological characters with potentially robust phylogenetic signal. The resulting phylogeny places erymids within Glypheidea and supports a sister relationship between Astacidea and Glaessnericarididae. Stenochiroidea was found to be polyphyletic, with most genera forming a clade sister to Nephropidae; Pseudastacus is moved to Protastacidae, which resolves as the sister taxon to freshwater crayfish. The relationships among living and fossil taxa presented here provide new insight into the origins and evolutionary histories of the major lineages of marine clawed lobsters and freshwater crayfish.
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The Rediscovery of a Relict Unlocks the First Global Phylogeny of Whip Spiders (Amblypygi)
Asymmetrical rates of cladogenesis and extinction abound in the tree of life, resulting in numerous minute clades that are dwarfed by larger sister groups. Such taxa are commonly regarded as phylogenetic relicts or “living fossils” when they exhibit an ancient first appearance in the fossil record and prolonged external morphological stasis, particularly in comparison to their more diversified sister groups. Due to their special status, various phylogenetic relicts tend to be well-studied and prioritized for conservation. A notable exception to this trend is found within Amblypygi (“whip spiders”), a visually striking order of functionally hexapodous arachnids that are notable for their antenniform first walking leg pair (the eponymous “whips”). Paleoamblypygi, the putative sister group to the remaining Amblypygi, is known from Late Carboniferous and Eocene deposits but is survived by a single living species, Paracharon caecusHansen (1921), that was last collected in 1899. Due to the absence of genomic sequence-grade tissue for this vital taxon, there is no global molecular phylogeny for Amblypygi to date, nor a fossil-calibrated estimation of divergences within the group. Here, we report a previously unknown species of Paleoamblypygi from a cave site in Colombia. Capitalizing upon this discovery, we generated the first molecular phylogeny of Amblypygi, integrating ultraconserved element sequencing with legacy Sanger datasets and including described extant genera. To quantify the impact of sampling Paleoamblypygi on divergence time estimation, we performed in silico experiments with pruning of Paracharon. We demonstrate that the omission of relicts has a significant impact on the accuracy of node dating approaches that outweighs the impact of excluding ingroup fossils, which bears upon the ancestral range reconstruction for the group. Our results underscore the imperative for biodiversity discovery efforts in elucidating the phylogenetic relationships of “dark taxa,” and especially phylogenetic relicts in tropical and subtropical habitats. The lack of reciprocal monophyly for Charontidae and Charinidae leads us to subsume them into one family, Charontidae, new synonymy.
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- Award ID(s):
- 2016141
- PAR ID:
- 10563119
- Editor(s):
- Dayrat, Benoit
- Publisher / Repository:
- Oxford University Press
- Date Published:
- Journal Name:
- Systematic Biology
- Volume:
- 73
- Issue:
- 3
- ISSN:
- 1063-5157
- Page Range / eLocation ID:
- 495 to 505
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.1093/sysbio/syae021
