An official website of the United States government
Course-based undergraduate research experiences (CUREs) are an effective way to integrate research into an undergraduate science curriculum and extend research experiences to a large, diverse group of early-career students. We developed a biology CURE at the University of Miami (UM) called the UM Authentic Research Laboratories (UMARL), in which groups of first-year students investigated novel questions and conducted projects of their own design related to the research themes of the faculty instructors. Herein, we describe the implementation and student outcomes of this long-running CURE. Using a national survey of student learning through research experiences in courses, we found that UMARL led to high student self-reported learning gains in research skills such as data analysis and science communication, as well as personal development skills such as self-confidence and self-efficacy. Our analysis of academic outcomes revealed that the odds of students who took UMARL engaging in individual research, graduating with a degree in science, technology, engineering, or mathematics (STEM) within 4 years, and graduating with honors were 1.5–1.7 times greater than the odds for a matched group of students from UM’s traditional biology labs. The authenticity of UMARL may have fostered students’ confidence that they can do real research, reinforcing their persistence in STEM.
more »
« less
This content will become publicly available on September 12, 2025
Design and implementation of an asynchronous online course-based undergraduate research experience (CURE) in computational genomics
As genomics technologies advance, there is a growing demand for computational biologists trained for genomics analysis but instructors face significant hurdles in providing formal training in computer programming, statistics, and genomics to biology students. Fully online learners represent a significant and growing community that can contribute to meet this need, but they are frequently excluded from valuable research opportunities which mostly do not offer the flexibility they need. To address these opportunity gaps, we developed an asynchronous course-based undergraduate research experience (CURE) for computational genomics specifically for fully online biology students. We generated custom learning materials and leveraged remotely accessible computational tools to address 2 novel research questions over 2 iterations of the genomics CURE, one testing bioinformatics approaches and one mining cancer genomics data. Here, we present how the instructional team distributed analysis needed to address these questions between students over a 7.5-week CURE and provided concurrent training in biology and statistics, computer programming, and professional development. Scores from identical learning assessments administered before and after completion of each CURE showed significant learning gains across biology and coding course objectives. Open-response progress reports were submitted weekly and identified self-reported adaptive coping strategies for challenges encountered throughout the course. Progress reports identified problems that could be resolved through collaboration with instructors and peers via messaging platforms and virtual meetings. We implemented asynchronous communication using the Slack messaging platform and an asynchronous journal club where students discussed relevant publications using the Perusall social annotation platform. The online genomics CURE resulted in unanticipated positive outcomes, including students voluntarily discussing plans to continue research after the course. These outcomes underscore the effectiveness of this genomics CURE for scientific training, recruitment and student-mentor relationships, and student successes. Asynchronous genomics CUREs can contribute to a more skilled, diverse, and inclusive workforce for the advancement of biomedical science.
more »
« less
- Award ID(s):
- 2044096
- PAR ID:
- 10573536
- Editor(s):
- Palagi, Patricia M
- Publisher / Repository:
- PLoS Computational Biology
- Date Published:
- Journal Name:
- PLOS Computational Biology
- Volume:
- 20
- Issue:
- 9
- ISSN:
- 1553-7358
- Page Range / eLocation ID:
- e1012384
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Abstract The Bee the CURE is a novel course-based undergraduate research experience (CURE) that engages introductory biology students in DNA barcoding (DNA extraction, amplification, and bioinformatics) in partnership with the Tucson Bee Collaborative and the University of Arizona. The first iteration of this CURE taught at Pima Community College (PCC) occurred during the Fall 2020 semester in which the course was taught online and students focused on bioinformatics. Due to the online format, students were unable to participate directly in the wet-lab components (extraction and amplification) of the course. These were approximated with videos of the instructor performing the tasks. A qualitative case study of this semester built from student interviews found that students were able to form positive relationships with instructors and peer mentors but that the online format of the class posed some challenges to relationship formation. Students reported developing self-efficacy in bioinformatics skills while online lab participation disrupted student’s gaining “hands-on experiences” and seldom led to development of science self-efficacy in wet lab skills. Our findings from a study of a synchronous online CURE allowed us to characterize a context in which online learning posed a challenge and perhaps even a threat to research self-efficacy, especially regarding skill development and self-efficacy in “hands-on” areas, such as wet-bench research skills. Yet optimistically, our study highlights the potential of online community college learning environments to provide mastery experiences in online science contexts (e.g., bioinformatics) and opportunities for relationship building.more » « less
-
The Association of American Colleges and Universities identifies undergraduate research experiences as a high impact practice for increasing student success and retention in STEM majors. Most undergraduate research opportunities for community college engineering students involve partnerships with universities and typically take the form of paid summer experiences. Course-based Undergraduate Research Experiences (CUREs) offer an alternative model with potential for significant expansion of research opportunities for students. This approach weaves research into the courses students are already required to complete for their degrees. CUREs are an equitable approach for introducing students to research because they do not demand extracurricular financial and/or time commitments beyond what students must already commit to for their courses. This paper describes an adaptable model for implementing a CURE in an introductory engineering design and computing course that features applications of low-cost microcontrollers. Students work toward course learning outcomes focused on computer programming, engineering design processes, and effective teamwork in the context of multi-term research and development efforts to design, build, and test devices for other CUREs in science lab courses as well as for other applications at the college or with community partners. Students choose from a menu of projects each term, with a typical course offering involving four to six different projects running simultaneously. Each team identifies a focused design and development scope of work within the larger context of the project they are interested in. They give weekly progress reports and gather input from their customers. The work culminates in a prototype and final report to document their work for student teams who will carry it forward in future terms. We assessed the impact of the experience on students’ beliefs about science and engineering, STEM confidence, and career aspirations using a nationally normed survey for CUREs in STEM and report results from five terms of offering this course. We find statistically significant pre-post gains on two-thirds of the survey items relating to students’ understanding of the research process and confidence in their STEM abilities. The pre-post gains are generally comparable to those reported by others who used the same survey to assess the impact of a summer research experience for community college students. These findings indicate that the benefits of student participation in this CURE model are comparable to the benefits students see by participation in summer research programs.more » « less
-
Marshall, Pamela Ann (Ed.)ABSTRACT The initial phase of the COVID-19 pandemic changed the nature of course delivery from largely in-person to exclusively remote, thus disrupting the well-established pedagogy of the Genomics Education Partnership (GEP; https://www.thegep.org ). However, our web-based research adapted well to the remote learning environment. As usual, students who engaged in the GEP’s Course-based Undergraduate Research Experience (CURE) received digital projects based on genetic information within assembled Drosophila genomes. Adaptations for remote implementation included moving new member faculty training and peer Teaching Assistant office hours from in-person to online. Surprisingly, our faculty membership significantly increased and, hence, the number of supported students. Furthermore, despite the mostly virtual instruction of the 2020–2021 academic year, there was no significant decline in student learning nor attitudes. Based on successfully expanding the GEP CURE within a virtual learning environment, we provide four strategic lessons we infer toward democratizing science education. First, it appears that increasing access to scientific research and professional development opportunities by supporting virtual, cost-free attendance at national conferences attracts more faculty members to educational initiatives. Second, we observed that transitioning new member training to an online platform removed geographical barriers, reducing time and travel demands, and increased access for diverse faculty to join. Third, developing a Virtual Teaching Assistant program increased the availability of peer support, thereby improving the opportunities for student success. Finally, increasing access to web-based technology is critical for providing equitable opportunities for marginalized students to fully participate in research courses. Online CUREs have great potential for democratizing science education.more » « less
-
The American Psychological Association Guidelines for the Psychology Major emphasize the development of scientific inquiry and critical thinking skills. We present findings from a department-wide effort to promote statistical literacy in introductory psychology at a nonselective public college. We examined course outcomes across 10 course sections taught in person or online with varying enrollments (total N = 485 students). Instructors administered online assignments about psychological research via Qualtrics, featuring statistics exercises and Excel worksheet activities. As a low-stakes introduction to statistical reasoning, instructors graded work based on completion rather than accuracy. Students completed the majority of Qualtrics assignments and about half of the Excel worksheets. As potential factors related to student outcomes, we considered external factors, internal factors, and student skills, and included demographic factors as control variables. Students with greater work obligations and those who completed work on smartphones or tablets (external factors) completed fewer assignments than their peers. Students with higher self-efficacy and greater anxiety about statistics (internal factors) completed more Qualtrics assignments, and those with higher statistics knowledge and reading comprehension (student skills) completed more Excel worksheets. Course section characteristics (modality, enrollment) were unrelated to student outcomes. The results demonstrate the feasibility of using low-stakes assignments to promote statistical literacy while emphasizing psychology as an empirical science. Future studies should assess learning gains associated with the curriculum and identify specific pedagogical features (e.g., feedback, active learning) that increase student engagement.more » « less
