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1. Maximal k-Edge-Connected Subgraphs in Almost-Linear Time for Small k

   https://doi.org/10.4230/LIPIcs.ESA.2023.92  

   Saranurak, Thatchaphol; Yuan, Wuwei (January 2023, Schloss Dagstuhl – Leibniz-Zentrum für Informatik)

   Gørtz, Inge Li; Farach-Colton, Martin; Puglisi, Simon J; Herman, Grzegorz (Ed.)

   We give the first almost-linear time algorithm for computing the maximal k-edge-connected subgraphs of an undirected unweighted graph for any constant k. More specifically, given an n-vertex m-edge graph G = (V,E) and a number k = log^o(1) n, we can deterministically compute in O(m+n^{1+o(1)}) time the unique vertex partition {V_1,… ,V_z} such that, for every i, V_i induces a k-edge-connected subgraph while every superset V'_i ⊃ V_{i} does not. Previous algorithms with linear time work only when k ≤ 2 [Tarjan SICOMP'72], otherwise they all require Ω(m+n√n) time even when k = 3 [Chechik et al. SODA'17; Forster et al. SODA'20]. Our algorithm also extends to the decremental graph setting; we can deterministically maintain the maximal k-edge-connected subgraphs of a graph undergoing edge deletions in m^{1+o(1)} total update time. Our key idea is a reduction to the dynamic algorithm supporting pairwise k-edge-connectivity queries [Jin and Sun FOCS'20]. 

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2. Algorithms for covering multiple submodular constraints and applications

   https://doi.org/10.1007/s10878-022-00874-x  

   Chekuri, Chandra; Inamdar, Tanmay; Quanrud, Kent; Varadarajan, Kasturi; Zhang, Zhao (June 2022, Journal of Combinatorial Optimization)

   Abstract We consider the problem of covering multiple submodular constraints. Given a finite ground set N , a weight function $$w: N \rightarrow \mathbb {R}_+$$ w : N → R + , r monotone submodular functions $$f_1,f_2,\ldots ,f_r$$ f 1 , f 2 , … , f r over N and requirements $$k_1,k_2,\ldots ,k_r$$ k 1 , k 2 , … , k r the goal is to find a minimum weight subset $$S \subseteq N$$ S ⊆ N such that $$f_i(S) \ge k_i$$ f i ( S ) ≥ k i for $$1 \le i \le r$$ 1 ≤ i ≤ r . We refer to this problem as Multi-Submod-Cover and it was recently considered by Har-Peled and Jones (Few cuts meet many point sets. CoRR. arxiv:abs1808.03260 Har-Peled and Jones 2018) who were motivated by an application in geometry. Even with $$r=1$$ r = 1 Multi-Submod-Cover generalizes the well-known Submodular Set Cover problem ( Submod-SC ), and it can also be easily reduced to Submod-SC . A simple greedy algorithm gives an $$O(\log (kr))$$ O ( log ( k r ) ) approximation where $$k = \sum _i k_i$$ k = ∑ i k i and this ratio cannot be improved in the general case. In this paper, motivated by several concrete applications, we consider two ways to improve upon the approximation given by the greedy algorithm. First, we give a bicriteria approximation algorithm for Multi-Submod-Cover that covers each constraint to within a factor of $$(1-1/e-\varepsilon )$$ ( 1 - 1 / e - ε ) while incurring an approximation of $$O(\frac{1}{\epsilon }\log r)$$ O ( 1 ϵ log r ) in the cost. Second, we consider the special case when each $$f_i$$ f i is a obtained from a truncated coverage function and obtain an algorithm that generalizes previous work on partial set cover ( Partial-SC ), covering integer programs ( CIPs ) and multiple vertex cover constraints Bera et al. (Theoret Comput Sci 555:2–8 Bera et al. 2014). Both these algorithms are based on mathematical programming relaxations that avoid the limitations of the greedy algorithm. We demonstrate the implications of our algorithms and related ideas to several applications ranging from geometric covering problems to clustering with outliers. Our work highlights the utility of the high-level model and the lens of submodularity in addressing this class of covering problems. 

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3. Repetition Aware Text Indexing for Matching Patterns with Wildcards

   https://doi.org/10.4230/LIPICS.ICALP.2025.88  

   Gibney, Daniel; Huffstutler, Jackson; Parthasarathi, Mano Prakash; Thankachan, Sharma V (January 2025, Schloss Dagstuhl – Leibniz-Zentrum für Informatik)

   Censor-Hillel, Keren; Grandoni, Fabrizio; Ouaknine, Joel; Puppis, Gabriele (Ed.)

   We study the problem of indexing a text T[1..n] to support pattern matching with wildcards. The input of a query is a pattern P[1..m] containing h ∈ [0, k] wildcard (a.k.a. don't care) characters and the output is the set of occurrences of P in T (i.e., starting positions of substrings of T that matches P), where k = o(log n) is fixed at index construction. A classic solution by Cole et al. [STOC 2004] provides an index with space complexity O(n ⋅ (clog n)^k/k!)) and query time O(m+2^h log log n+occ), where c > 1 is a constant, and occ denotes the number of occurrences of P in T. We introduce a new data structure that significantly reduces space usage for highly repetitive texts while maintaining efficient query processing. Its space (in words) and query time are as follows: O(δ log (n/δ)⋅ c^k (1+(log^k (δ log n))/k!)) and O((m+2^h +occ)log n)) The parameter δ, known as substring complexity, is a recently introduced measure of repetitiveness that serves as a unifying and lower-bounding metric for several popular measures, including the number of phrases in the LZ77 factorization (denoted by z) and the number of runs in the Burrows-Wheeler Transform (denoted by r). Moreover, O(δ log (n/δ)) represents the optimal space required to encode the data in terms of n and δ, helping us see how close our space is to the minimum required. In another trade-off, we match the query time of Cole et al.’s index using O(n+δ log (n/δ) ⋅ (clogδ)^{k+ε}/k!) space, where ε > 0 is an arbitrarily small constant. We also demonstrate how these techniques can be applied to a more general indexing problem, where the query pattern includes k-gaps (a gap can be interpreted as a contiguous sequence of wildcard characters). 

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4. Optimal non-adaptive probabilistic group testing in general sparsity regimes

   https://doi.org/10.1093/imaiai/iaab020  

   Bay, Wei Heng; Scarlett, Jonathan; Price, Eric (February 2022, Information and Inference: A Journal of the IMA)

   Abstract In this paper, we consider the problem of noiseless non-adaptive probabilistic group testing, in which the goal is high-probability recovery of the defective set. We show that in the case of $$n$$ items among which $$k$$ are defective, the smallest possible number of tests equals $$\min \{ C_{k,n} k \log n, n\}$$ up to lower-order asymptotic terms, where $$C_{k,n}$$ is a uniformly bounded constant (varying depending on the scaling of $$k$$ with respect to $$n$$) with a simple explicit expression. The algorithmic upper bound follows from a minor adaptation of an existing analysis of the Definite Defectives algorithm, and the algorithm-independent lower bound builds on existing works for the regimes $$k \le n^{1-\varOmega (1)}$$ and $$k = \varTheta (n)$$. In sufficiently sparse regimes (including $$k = o\big ( \frac{n}{\log n} \big )$$), our main result generalizes that of Coja-Oghlan et al. (2020) by avoiding the assumption $$k \le n^{1-\varOmega (1)}$$, whereas in sufficiently dense regimes (including $$k = \omega \big ( \frac{n}{\log n} \big )$$), our main result shows that individual testing is asymptotically optimal for any non-zero target success probability, thus strengthening an existing result of Aldridge (2019, IEEE Trans. Inf. Theory, 65, 2058–2061) in terms of both the error probability and the assumed scaling of $$k$$. 

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5. From Directed Steiner Tree to Directed Polymatroid Steiner Tree in Planar Graphs

   https://doi.org/10.4230/LIPIcs.ESA.2024.42  

   Chekuri, Chandra; Jain, Rhea; Kulkarni, Shubhang; Zheng, Da Wei; Zhu, Weihao (January 2024, Schloss Dagstuhl – Leibniz-Zentrum für Informatik)

   Chan, Timothy; Fischer, Johannes; Iacono, John; Herman, Grzegorz (Ed.)

   In the Directed Steiner Tree (DST) problem the input is a directed edge-weighted graph G = (V,E), a root vertex r and a set S ⊆ V of k terminals. The goal is to find a min-cost subgraph that connects r to each of the terminals. DST admits an O(log² k/log log k)-approximation in quasi-polynomial time [Grandoni et al., 2022; Rohan Ghuge and Viswanath Nagarajan, 2022], and an O(k^{ε})-approximation for any fixed ε > 0 in polynomial-time [Alexander Zelikovsky, 1997; Moses Charikar et al., 1999]. Resolving the existence of a polynomial-time poly-logarithmic approximation is a major open problem in approximation algorithms. In a recent work, Friggstad and Mousavi [Zachary Friggstad and Ramin Mousavi, 2023] obtained a simple and elegant polynomial-time O(log k)-approximation for DST in planar digraphs via Thorup’s shortest path separator theorem [Thorup, 2004]. We build on their work and obtain several new results on DST and related problems. - We develop a tree embedding technique for rooted problems in planar digraphs via an interpretation of the recursion in [Zachary Friggstad and Ramin Mousavi, 2023]. Using this we obtain polynomial-time poly-logarithmic approximations for Group Steiner Tree [Naveen Garg et al., 2000], Covering Steiner Tree [Goran Konjevod et al., 2002] and the Polymatroid Steiner Tree [Gruia Călinescu and Alexander Zelikovsky, 2005] problems in planar digraphs. All these problems are hard to approximate to within a factor of Ω(log² n/log log n) even in trees [Eran Halperin and Robert Krauthgamer, 2003; Grandoni et al., 2022]. - We prove that the natural cut-based LP relaxation for DST has an integrality gap of O(log² k) in planar digraphs. This is in contrast to general graphs where the integrality gap of this LP is known to be Ω(√k) [Leonid Zosin and Samir Khuller, 2002] and Ω(n^{δ}) for some fixed δ > 0 [Shi Li and Bundit Laekhanukit, 2022]. - We combine the preceding results with density based arguments to obtain poly-logarithmic approximations for the multi-rooted versions of the problems in planar digraphs. For DST our result improves the O(R + log k) approximation of [Zachary Friggstad and Ramin Mousavi, 2023] when R = ω(log² k). 

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