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1. Horizontal Gene Transfer Is the Main Driver of Antimicrobial Resistance in Broiler Chicks Infected with Salmonella enterica Serovar Heidelberg

   https://doi.org/10.1128/mSystems.00729-21  

   Oladeinde, Adelumola; Abdo, Zaid; Press, Maximilian O.; Cook, Kimberly; Cox, Nelson A.; Zwirzitz, Benjamin; Woyda, Reed; Lakin, Steven M.; Thomas, Jesse C.; Looft, Torey; et al (August 2021, mSystems)

   Garrido, Daniel (Ed.)

   ABSTRACT The overuse and misuse of antibiotics in clinical settings and in food production have been linked to the increased prevalence and spread of antimicrobial resistance (AR). Consequently, public health and consumer concerns have resulted in a remarkable reduction in antibiotics used for food animal production. However, there are no data on the effectiveness of antibiotic removal in reducing AR shared through horizontal gene transfer (HGT). In this study, we used neonatal broiler chicks and Salmonella enterica serovar Heidelberg, a model food pathogen, to test if chicks raised antibiotic free harbor transferable AR. We challenged chicks with an antibiotic-susceptible S . Heidelberg strain using various routes of inoculation and determined if S . Heidelberg isolates recovered carried plasmids conferring AR. We used antimicrobial susceptibility testing and whole-genome sequencing (WGS) to show that chicks grown without antibiotics harbored an antimicrobial resistant S . Heidelberg population at 14 days after challenge and chicks challenged orally acquired AR at a higher rate than chicks inoculated via the cloaca. Using 16S rRNA gene sequencing, we found that S . Heidelberg infection perturbed the microbiota of broiler chicks, and we used metagenomics and WGS to confirm that a commensal Escherichia coli population was the main reservoir of an IncI1 plasmid acquired by S . Heidelberg. The carriage of this IncI1 plasmid posed no fitness cost to S . Heidelberg but increased its fitness when exposed to acidic pH in vitro . These results suggest that HGT of plasmids carrying AR shaped the evolution of S . Heidelberg and that antibiotic use reduction alone is insufficient to limit antibiotic resistance transfer from commensal bacteria to Salmonella enterica . IMPORTANCE The reported increase in antibiotic-resistant bacteria in humans has resulted in a major shift away from antibiotic use in food animal production. This shift has been driven by the assumption that removing antibiotics will select for antibiotic susceptible bacterial taxa, which in turn will allow the currently available antibiotic arsenal to be more effective. This change in practice has highlighted new questions that need to be answered to assess the effectiveness of antibiotic removal in reducing the spread of antibiotic resistance bacteria. This research demonstrates that antibiotic-susceptible Salmonella enterica serovar Heidelberg strains can acquire multidrug resistance from commensal bacteria present in the gut of neonatal broiler chicks, even in the absence of antibiotic selection. We demonstrate that exposure to acidic pH drove the horizontal transfer of antimicrobial resistance plasmids and suggest that simply removing antibiotics from food animal production might not be sufficient to limit the spread of antimicrobial resistance. 

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2. Nutrient recovery in cultured meat systems: Impacts on cost and sustainability metrics

   https://doi.org/10.3389/fnut.2023.1151801  

   Myers, Gabrielle M.; Jaros, Kate A.; Andersen, Daniel S.; Raman, D. Raj (April 2023, Frontiers in Nutrition)

   A growing global meat demand requires a decrease in the environmental impacts of meat production. Cultured meat (CM) can potentially address multiple challenges facing animal agriculture, including those related to animal welfare and environmental impacts, but existing cost analyses suggest it is hard for CM to match the relatively low costs of conventionally produced meat. This study analyzes literature reports to contextualize CM’s protein and calorie use efficiencies, comparing CM to animal meat products’ feed conversion ratios, areal productivities, and nitrogen management. Our analyses show that CM has greater protein and energy areal productivities than conventional meat products, and that waste nitrogen from spent media is critical to CM surpassing the nitrogen use efficiency of meat produced in swine and broiler land-applied manure systems. The CM nutrient management costs, arising from wastewater treatment and land application, are estimated to be more expensive than in conventional meat production. Overall, this study demonstrates that nitrogen management will be a key aspect of sustainability in CM production, as it is in conventional meat systems. 

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3. Development of light-responsive protein binding in the monobody non-immunoglobulin scaffold

   https://doi.org/10.1038/s41467-020-17837-7  

   Carrasco-López, César; Zhao, Evan M.; Gil, Agnieszka A.; Alam, Nathan; Toettcher, Jared E.; Avalos, José L. (August 2020, Nature Communications)

   Abstract Monobodies are synthetic non-immunoglobulin customizable protein binders invaluable to basic and applied research, and of considerable potential as future therapeutics and diagnostic tools. The ability to reversibly control their binding activity to their targets on demand would significantly expand their applications in biotechnology, medicine, and research. Here we present, as proof-of-principle, the development of a light-controlled monobody (OptoMB) that works in vitro and in cells and whose affinity for its SH2-domain target exhibits a 330-fold shift in binding affinity upon illumination. We demonstrate that our αSH2-OptoMB can be used to purify SH2-tagged proteins directly from crudeE. coliextract, achieving 99.8% purity and over 40% yield in a single purification step. By virtue of their ability to be designed to bind any protein of interest, OptoMBs have the potential to find new powerful applications as light-switchable binders of untagged proteins with the temporal and spatial precision afforded by light. 

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4. Chlorinated Plastics Offer Unique Opportunities and Challenges in Upcycling

   https://doi.org/10.1002/pi.6621  

   Al Alshaikh, Ali; Bara, Jason E. (February 2024, Polymer International)

   Abstract Chlorinated plastics are part of the everyday lives of consumers and producers alike. They can be found in buildings, automobiles, fashion, packaging, and many other places. This prevalence makes them a considerable part of the plastic waste crisis. Interest in “upcycling” (as opposed to recycling) has grown recently to augment the possibilities of managing plastic waste. The advances made in plastic upcycling have focused on polyethylene (PE), polypropylene (PP), polyethylene terephthalate (PET) and polystyrene (PS) while chlorinated plastics, chiefly polyvinyl chloride (PVC), have received much less attention. The release of chlorine‐containing molecules during treatment of chlorinated plastic greatly complicates cross‐method upcycling, or even the treatment of plastic mixes containing chlorinated plastics. This review presents a case for extracting value from chlorinated plastics by highlighting appealing upcycling products made owing to, or despite, the C‐Cl bond via depolymerization, carbonization and modification. This article is protected by copyright. All rights reserved. 

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5. Copolymerization of a Bisphenol a Derivative and Elemental Sulfur by the RASP Process

   https://doi.org/10.3390/suschem1020013  

   Thiounn, Timmy; Lauer, Moira K.; Karunarathna, Menisha S.; Tennyson, Andrew G.; Smith, Rhett C. (September 2020, Sustainable Chemistry)

   null (Ed.)

   Fossil fuel refining produces over 70 Mt of excess sulfur annually from for which there is currently no practical use. Recently, methods to convert waste sulfur to recyclable and biodegradable polymers have been delineated. In this report, a commercial bisphenol A (BPA) derivative, 2,2′,5,5′-tetrabromo(bisphenol A) (Br4BPA), is explored as a potential organic monomer for copolymerization with elemental sulfur by RASP (radical-induced aryl halide-sulfur polymerization). Resultant copolymers, BASx (x = wt% sulfur in the monomer feed, screened for values of 80, 85, 90, and 95) were characterized by thermogravimetric analysis, differential scanning calorimetry, and dynamic mechanical analysis. Analysis of early stage reaction products and depolymerization products support proposed S–Caryl bond formation and regiochemistry, while fractionation of BASx reveals a sulfur rank of 3–6. Copolymers having less organic cross-linker (5 or 10 wt%) in the monomer feed were thermoplastics, whereas thermosets were accomplished when 15 or 20 wt% of organic cross-linker was used. The flexural strengths of the thermally processable samples (>3.4 MPa and >4.7 for BAS95 and BAS90, respectively) were quite high compared to those of familiar building materials such as portland cement (3.7 MPa). Furthermore, copolymer BAS90 proved quite resistant to degradation by oxidizing organic acid, maintaining its full flexural strength after soaking in 0.5 M H2SO4 for 24 h. BAS90 could also be remelted and recast into shapes over many cycles without any loss of mechanical strength. This study on the effect of monomer ratio on properties of materials prepared by RASP of small molecular aryl halides confirms that highly cross-linked materials with varying physical and mechanical properties can be accessed by this protocol. This work is also an important step towards potentially upcycling BPA from plastic degradation and sulfur from fossil fuel refining. 

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