The 1:1 cocrystal of 5-fluorocytosine (5FC) and 4-hydroxybenzaldehyde (4HB), C4H4FN3O·C7H6O2has been synthesized and its structure characterized by single-crystal X-ray diffraction and Hirshfeld surface analysis. The compound crystallizes in the monoclinicP21/cspace group. A robust supramolecular architecture is stabilized by N—H...O, N—H...N, C—H...O and C—H...F hydrogen bonds, formingR22(8),R44(22),R66(32), andR88(34) ring motifs. The N—H...O and N—H...N hydrogen bonds form strong directional interactions, contributing to theR22(8) andR88(34) motifs through dimeric and extended ring structures. O—H...O interactions link 5FC and 4HB molecules, generating anR66(32) ring that enhances the packing. Weaker C—H...F bonds help form theR44(22) tetrameric motif, supporting the overall three-dimensional supramolecular framework. Additionally, C—F...π interactions between the fluorine atom and the aromatic ring add further to the crystal cohesion. Hirshfeld surface analysis and two-dimensional fingerprint plots confirm that O...H/H...O contacts are the most significant, highlighting the central role of hydrogen bonding in the stability and organization of the crystal structure.
more »
« less
Intra- and intermolecular C—H...F hydrogen bonds in the crystal structure of 1,2-bis[2-(2,3,4,5-tetrafluorophenyl)ethynyl]benzene
The title molecule, C22H6F8, crystallizes in the monoclinic space groupP21/cwith two unique molecules in the asymmetric unit andZ= 8. Each molecule features a short intramolecularsp2-C—H...F hydrogen bond with H...F separations at 2.363 (14) and 2.270 (14) Å, corresponding to 91 and 87.5% of the sum of the van der Waals radii, and C—H...F angles of 158.3 (14) and 166.8 (14)°, respectively. Each molecule also forms an intermolecular bifurcated CH...(F)2interaction with H...F distances ranging from 2.500 (16) to 2.597 (17) Å.
more »
« less
- Award ID(s):
- 1306284
- PAR ID:
- 10629300
- Publisher / Repository:
- International Union of Crystallography
- Date Published:
- Journal Name:
- Acta Crystallographica Section E Crystallographic Communications
- Volume:
- 80
- Issue:
- 12
- ISSN:
- 2056-9890
- Page Range / eLocation ID:
- 1298 to 1301
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
The title compound, systematic name tris(μ2-perfluoro-o-phenylene)(μ2-3-phenyl-4H-chromen-4-one)-triangulo-trimercury, [Hg3(C6F4)3(C15H10O2)], crystallizes in the monoclinicP21/nspace group with one flavone (FLA) and one cyclic trimeric perfluoro-o-phenylenemercury (TPPM) molecule per asymmetric unit. The FLA molecule is located on one face of the TPPM acceptor and is linked in an asymmetric coordination of its carbonyl oxygen atom with two Hg centers of the TPPM macrocycle. The angular-shaped complexes pack in zigzag chains where they stackviatwo alternating TPPM–TPPM and FLA–FLA stacking patterns. The distance between the mean planes of the neighboring TPPM macrocycles in the stack is 3.445 (2) Å, and that between the benzo-γ-pyrone moieties of FLA is 3.328 (2) Å. The neighboring stacks are interdigitated through the shortened F...F, CH...F and CH...π contacts, forming a dense crystal structure.more » « less
-
The asymmetric unit in the title salt, (C8H20N)2[SnCl4(C7H4Cl2F3)2], features a di-isobutylammonium cation in a general position and a diorganotin tetrachloride dianion,i.e. tetrachloridobis(3-trifuoromethylphenyl)stannate(IV), located on a centre of inversion; the SnIVatom is octahedrally coordinated. In the crystal, charge-assisted N+—H...Cl hydrogen bonds along with C—H...F contacts occur within supramolecular layers that interdigitate along thea-axis direction.more » « less
-
Bis(triphenylsulfonium) tetrachloridomanganate(II), (C18H15S)2[MnCl4] (I), triphenylsulfonium tetrachloridoferrate(III), (C18H15S)[FeCl4] (II), and bis(triphenylsulfonium) tetrachloridocobaltate(II), (C18H15S)2[CoCl4] (III), crystallize in the monoclinic space groupsP21/n[(I) and (III)] andP21/c[(II)]. Compounds (I) and (III) each contain two crystallographically independent triphenylsulfonium (TPS+) cations in the asymmetric unit, whereas (II) has one. In all three compounds, the sulfonium centers adopt distorted trigonal–pyramidal geometries, with S—C bond lengths falling roughly in the 1.78–1.79 Å range and C—S—C angles observed at about 101 to 106°. The [MCl4]n−anions (M= Mn2+, Fe3+, Co2+;n= 2,1,2) adopt slightly distorted tetrahedral geometries, withM—Cl bond lengths in the 2.19–2.38 Å range and Cl—M—Cl angles of approximately 104–113°. Hirshfeld surface analyses shows that H...H and H...C contacts dominate the TPS+cation environments, whereas H...Cl and shortM—S interactions link each [MCl4]n−anion to the surrounding cations. In (I) and (III), inversion-centered π–π stacking further consolidates the crystal packing, while in (II) no π–π interactions are observed.more » « less
-
The crystal structure of the title compound, C15H20N2orDippIm, is reported. At 106 (2) K, the molecule has monoclinicP21/c symmetry with four molecules in the unit cell. The imidazole ring is rotated 80.7 (1)° relative to the phenyl ring. Intermolecular stabilization primarily results from close contacts between the N atom at the 3-position on the imidazole ring and the C—H bond at the 4-position on the neighboringDippIm, with aryl–aryl distances outside of the accepted distance of 5 Å for π-stacking.more » « less
An official website of the United States government

