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1. The element of Paaw in marsupials and the middle ear of Philander opossum (Linnaeus, 1758) (Didelphimorphia, Didelphidae)

   Wible, John R.; Shelley, Sarah L.; Belz, Carly (May 2021, Annals of Carnegie Museum)

   null (Ed.)

   A small piece of cartilage or bone, the element of Paaw, occurs in the tendon of the stapedius muscle in some extant marsupial and placental mammals. It has been nearly a century since the last comprehensive treatment of the distribution of the element of Paaw in mammals. The current report updates knowledge on this structure by synthesizing the subsequent literature and providing new observations of extant marsupials from the collections of the Section of Mammals, Carnegie Museum of Natural History, and two online resources for CT scanned data: DigiMorph.org and MorphoSource.org. We found an element of Paaw in some representatives of all seven extant marsupial orders: Didelphimorphia, Microbiotheria, Notoryctemorphia, Peramelemorphia, Paucituberculata, Dasyuromorphia, and Diprotodontia. In the first four orders, the element is substantial, longer than the long axis of the fenestra vestiuli (oval window), which holds the stapedial footplate; it is smaller than the long axis of the fenestra vestibuli in Paucituberculata and we do not have measures to report for the last two orders. In most marsupials examined, the element of Paaw contacts the petrosal behind the oval window, suggesting it functions as a sesamoid bone, increasing the lever arm of the stapedius muscle. Although there is some variability in the presence of the bone both between and within individual museum specimens, we interpret this as the result of preparation techniques rather than true variation. To place the element of Paaw in its anatomical context, we describe in detail the ear region and middle-ear auditory apparatus of the gray four-eyed opossum, Philander opossum (Linnaeus, 1758), a didelphid from Central and South America, based on a CT scanned specimen from Carnegie Museum of Natural History. It has an ossified element of Paaw with a volume greater than the stapes. Comparisons are made with petrosals of Didelphis marsupialis Linnaeus, 1758, and Monodelphis domestica (Wagner, 1842), also based on CT scanned specimens. 

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2. A family of olfactory receptors uniquely expanded in marsupial and monotreme genomes are expressed by a T cell subset also unique to marsupials and monotremes

   https://doi.org/10.1016/j.dci.2024.105149  

   Sampson, Jordan M; Morrissey, Kimberly A; Douek, Daniel C; Miller, Robert D (February 2024, Developmental & Comparative Immunology)

   Olfactory receptors (OR), expressed on olfactory neurons, mediate the sense of smell. Recently, OR have also been shown to be expressed in non-olfactory tissues, including cells of the immune system. An analysis of single-cell transcriptomes of splenocytes of the gray short-tailed opossum (Monodelphis domestica) found OR are expressed on a subset of T cells, the γμ T cells, that are unique to marsupials and monotremes. A majority of opossum γμ T cells transcriptomes contain OR family 14 transcripts, specifically, from the OR14C subfamily. Amongst the mammals, the OR14 gene family is expanded in the genomes of marsupials and monotremes, and rarer or absent in placental mammals. In summary, here we demonstrate the intriguing correlation that a family of OR genes, abundant in the genomes of marsupials and monotremes, are ectopically expressed in a particular subset of T cells unique to the marsupials and monotremes. 

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3. Macro-parasites and micro-parasites co-exist in rodent communities but are associated with different community-level parameters

   https://doi.org/10.1016/j.ijppaw.2023.08.006  

   Salomon, Jordan; Sambado, Samantha B.; Crews, Arielle; Sidhu, Sukhman; Seredian, Eric; Almarinez, Adrienne; Grgich, Rachel; Swei, Andrea (August 2023, International Journal for Parasitology: Parasites and Wildlife)

   Wildlife species are often heavily parasitized by multiple infections simultaneously. Yet research on sylvatic transmission cycles, tend to focus on host interactions with a single parasite and neglects the influence of co- infections by other pathogens and parasites. Co-infections between macro-parasites and micro-parasites can alter mechanisms that regulate pathogenesis and are important for understanding disease emergence and dy- namics. Wildlife rodent hosts in the Lyme disease system are infected with macro-parasites (i.e., ticks and hel- minths) and micro-parasites (i.e., Borrelia spp.), however, there has not been a study that investigates the interaction of all three parasites (i.e., I. pacificus, Borrelia spp., and helminths) and how these co-infections impact prevalence of micro-parasites. We live-trapped rodents in ten sites in northern California to collect feces, blood, ear tissue, and attached ticks. These samples were used to test for infection status of Borrelia species (i.e., micro- parasite), and describe the burden of ticks and helminths (i.e., macro-parasites). We found that some rodent hosts were co-infected with all three parasites, however, the burden or presence of concurrent macro-parasites were not associated with Borrelia infections. For macro-parasites, we found that tick burdens were positively associ- ated with rodent Shannon diversity while negatively associated with predator diversity, whereas helminth burdens were not significantly associated with any host community metric. Ticks and tick-borne pathogens are associated with rodent host diversity, predator diversity, and abiotic factors. However, it is still unknown what factors helminths are associated with on the community level. Understanding the mechanisms that influence co- infections of multiple types of parasites within and across hosts is an increasingly critical component of characterizing zoonotic disease transmission and maintenance. 

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4. Parasites of the past: 90 years of change in parasitism for English sole

   https://doi.org/10.1002/fee.2379  

   Welicky, Rachel L.; Preisser, Whitney C.; Leslie, Katie L.; Mastick, Natalie; Fiorenza, Evan; Maslenikov, Katherine P.; Tornabene, Luke; Kinsella, John M.; Wood, Chelsea L. (July 2021, Frontiers in Ecology and the Environment)

   Historical data are extremely rare but essential for ascertaining whether contemporary infectious disease burdens are unusual. Natural history collections are a valuable source of such data, especially for reconstructing long timelines of parasite abundance. We quantified the parasites of 109 museum specimens of English sole (Parophrys vetulus), an economically important flatfish, collected from Puget Sound, Washington, over a 90‐year period (1930–2019). We counted nearly 2,500 individual parasites representing 23 distinct species/morphotypes and four broad taxonomic groupings. Of the 12 taxa that were prevalent enough to include in the analysis, nine did not change in abundance over time, two (an acanthocephalan and a trematode) decreased, and one (another trematode) increased. By broad taxonomic grouping, nematodes, trematodes, and leeches exhibited no change over time, whereas acanthocephalans declined significantly. The diverging patterns among parasite taxa suggest a double‐edged sword of responses to long‐term ocean change: some parasites might be on the rise, while others are declining. 

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5. Rodent Parasite Data for the Sevilleta National Wildlife Refuge, New Mexico (1990-1998)

   https://doi.org/10.6073/pasta/b739d2c75e142f5742b7bfe74c97d5c1  

   Duszyinski, Don (January 2016, Environmental Data Initiative)

   The 100,000 ha Sevilleta National Wildlife Refuge (SNWR) in central New Mexico lies in a transition zone that straddles several major biomes of the Southwest, including Great Basin Shrub-Steppe, Mogollon Pinon-Juniper Woodland, Great Plains Grassland and Chihuahuan Desert. During 9 years, (1990-1998), collaborating with the University of New Mexico's Long Term Ecological Research (LTER) program, 3,235 rodents (28 species in 4 families) were collected and identified from permanent collecting sites on the 3 major habitat types (grassland, desert/creosote, woodland) on the SNWR. Hosts were necropsied for endoparasites (protozoa [coccidia], helminths) and some ectoparasites. We identified and analyzed all the parasites found in these hosts. By 1998, we had in place the means to easily identify and moniter the parasites from all mammalian hosts caught on the LTER Phase II grant.This is not just another parasite survey; the data we collected was unique for several reasons: 1) This was the first complete inventory of a natural assemblage of parasites from all mammalian (rodent) hosts in 3 different communities, each from a distinctly defined geographic locality (habitat type) over the period of a decade, and beyond; 2) This study was part of a multidisciplinary approach to address conceptual issues of climate change on ecosystem structure and function at multiple scales (individuals, communities, etc) and correlative data from these related studies will strengthen and contribute to the robustness of this data set; 3) As the only parasite study on any of the LTER projects nationwide, it provided an ideal model, and perhaps incentive for parallel longterm studies of parasite communities to be examined in a variety of other habitat types, and from a variety of different perspectives, and other LTER sites in the network.Upon completing the work, we were able to use these long-term data to try to understand the dynamics of natural host-parasite assemblages. Hypotheses were then erected to test/address at least these questions: How do the different parasite communities colonize, mature, climax and senesce over time (or do they?), Do they vary in response to abiotic (climate change) and/or biotic (dispersal, colonization) factors? What temporal and spatial scales, and among what kinds of organisms, do coevolutionary processes influence the community organization of these parasites? Studies of the dynamics of multiple, coexisting species are confined primarily to microtine rodents and have hinted that multiannual cycles tend to be synchronous (Brown and Heske 1990). Are similar patterns seen for the parasites of our desert rodents? Answers to these questions relating to community structure, as well as to questions concerning parasite biodiversity on the SNWR, can be answered paritially or completely by the information we gathered on the parasite species infecting rodents collected on the SNWR. Initial emphasis of our work was on identifying all the parasites collected, by processing 8 consecutive years of parasite data, and on training the undergraduate and graduate students involved in the art of taxonomy and nomenclature of parasitic protozoans and helminths,  to supply some of these answers. 

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