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  1. An experimentally demonstrated, vertical chip-to-chip evanescent coupler between silicon nitride (Si₃N₄) and silicon (Si) is presented with the coupler loss measured to be 0.39 ± 1.06 dB at 1550 nm with a 1-dB bandwidth of 160 nm extending across the C-band, S-band, and L-band (1480-1640 nm). The average coupling loss was determined to be 0.73 dB for the 1480-1640 nm wavelength range with a ± 2σ tolerance of ± 0.92 dB. The 1-dB lateral alignment tolerance was 1.56 ± 0.14 μm at 1550 nm and the average tolerance was 1.38 ± 0.24 μm across the 1480-1640 nm wavelength regime. In addition, the average coupling loss varied by less than ± 0.35 dB and the average 1-dB alignment tolerance varied by less than ± 30 nm for temperatures varying from 23-60°C. Finally, the average coupling loss range was less than 1.5 dB range across four sets of identically packaged die. This is the first experimental demonstration of an inter-chip, passively assembled evanescent coupler using standard CMOS foundry processes for directly coupling between Si and Si₃N₄, overcoming a waveguide refractive index difference of Δn = 1.32 without requiring taper tip widths of less than 100 nm. 
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  2. Abstract SummarypyCapsid is a Python package developed to facilitate the characterization of the dynamics and quasi-rigid mechanical units of protein shells and other protein complexes. The package was developed in response to the rapid increase of high-resolution structures, particularly capsids of viruses, requiring multiscale biophysical analyses. Given a protein shell, pyCapsid generates the collective vibrations of its amino-acid residues, identifies quasi-rigid mechanical regions associated with the disassembly of the structure, and maps the results back to the input proteins for interpretation. pyCapsid summarizes the main results in a report that includes publication-quality figures. Availability and implementationpyCapsid’s source code is available under MIT License on GitHub. It is compatible with Python 3.8–3.10 and has been deployed in two leading Python package-management systems, PIP and Conda. Installation instructions and tutorials are available in the online documentation and in the pyCapsid’s YouTube playlist. In addition, a cloud-based implementation of pyCapsid is available as a Google Colab notebook. pyCapsid Colab does not require installation and generates the same report and outputs as the installable version. Users can post issues regarding pyCapsid in the repository’s issues section. 
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  3. As silicon photonics transitions from research to commercial deployment, packaging solutions that efficiently couple light into highly compact and functional sub-micrometer silicon waveguides are imperative but remain challenging. The 220 nm silicon-on-insulator (SOI) platform, poised to enable large-scale integration, is the most widely adopted by foundries, resulting in established fabrication processes and extensive photonic component libraries. The development of a highly efficient, scalable, and broadband coupling scheme for this platform is therefore of paramount importance. Leveraging two-photon polymerization (TPP) and a deterministic free-form micro-optics design methodology based on the Fermat’s principle, this work demonstrates an ultra-efficient and broadband 3-D coupler interface between standard SMF-28 single-mode fibers and silicon waveguides on the 220 nm SOI platform. The coupler achieves a low coupling loss of 0.8 dB for the fundamental TE mode, along with 1 dB bandwidth exceeding 180 nm. The broadband operation enables diverse bandwidth-driven applications ranging from communications to spectroscopy. Furthermore, the 3-D free-form coupler also enables large tolerance to fiber misalignments and manufacturing variability, thereby relaxing packaging requirements toward cost reduction capitalizing on standard electronic packaging process flows. 
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  4. The co-packaging of optics and electronics provides a potential path forward to achieving beyond 50 Tbps top of rack switch packages. In a co-packaged design, the scaling of bandwidth, cost, and energy is governed by the number of optical transceivers (TxRx) per package as opposed to transistor shrink. Due to the large footprint of optical components relative to their electronic counterparts, the vertical stacking of optical TxRx chips in a co-packaged optics design will become a necessity. As a result, development of efficient, dense, and wide alignment tolerance chip-to-chip optical couplers will be an enabling technology for continued TxRx scaling. In this paper, we propose a novel scheme to vertically couple into standard 220 nm silicon on insulator waveguides from 220 nm silicon nitride on glass waveguides using overlapping, inverse double tapers. Simulation results using Lumerical’s 3D Finite Difference Time Domain solver are presented, demonstrating insertion losses below -0.13 dB for an inter-chip spacing of 1µm; 1 dB vertical and lateral alignment tolerances of approximately 2.6µm and ± 2.8µm, respectively; a greater than 300 nm 1 dB bandwidth; and 1 dB twist and tilt tolerances of approximately ± 2.3 degrees and 0.4 degrees, respectively. These results demonstrate the potential of our coupler for use in co-packaged designs requiring high performance, high density, CMOS compatible out of plane optical connections. 
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