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ABSTRACT Ecosystem exchanges of carbon, water, and energy are central to Earth system functioning, yet their sensitivities to environmental variability remain poorly constrained across biomes and climates. Here, we analyzed ≥ 5 years of eddy covariance data from 87 AmeriFlux sites (964 site‐years) spanning six vegetation types and a broad range of climatic conditions to examine the controls and multi‐year trends of gross primary productivity (GPP), evapotranspiration (ET), water‐use efficiency (WUE), and the Bowen ratio. We trained boosted regression tree ensembles with environmental (air temperature, vapor pressure deficit, soil water content, atmospheric CO₂, radiation, wind speed) and temporal (month, year) variables and used interpretable machine learning—SHapley Additive exPlanations (SHAP) and Accumulated Local Effects (ALE)—to quantify driver importance and nonlinear responses. Across biomes and along climatic gradients, environmental controls reorganized predictably: radiation dominated under warm and humid conditions, whereas soil moisture exerted a stronger influence in drier or warmer systems. GPP and ET were shaped by similar dominant drivers, with radiation and temperature generally strongest but soil moisture exerting comparable influence in some biomes. WUE was consistently constrained by vapor pressure deficit, indicating stomatal regulation under rising atmospheric dryness. In contrast, controls on the Bowen ratio diverged more across biomes, indicating heterogeneity in how ecosystems partition energy between latent and sensible heat. Multi‐year trend analysis revealed negative associations of GPP and ET with rising atmospheric demand, and positive associations of the Bowen ratio with drying, indicating reduced evaporative cooling and stronger land–atmosphere coupling. Together, these findings show that while carbon and water fluxes remain tightly coupled across timescales, their balances reorganize predictably along bioclimatic gradients. This framework underscores the value of long‐term flux networks and interpretable machine learning for benchmarking Earth system models and constraining projections of terrestrial carbon–water–energy dynamics under climate change. 

Eddy covariance measurement systems provide direct observation of the exchange of greenhouse gases between ecosystems and the atmosphere, but have only occasionally been intentionally applied to quantify the carbon dynamics associated with specific climate mitigation strategies. Natural climate solutions (NCS) harness the photosynthetic power of ecosystems to avoid emissions and remove atmospheric carbon dioxide (CO2), sequestering it in biological carbon pools. In this perspective, we aim to determine which kinds of NCS strategies are most suitable for ecosystem-scale flux measurements and how these measurements should be deployed for diverse NCS scales and goals. We find that ecosystem-scale flux measurements bring unique value when assessing NCS strategies characterized by inaccessible and hard-to-observe carbon pool changes, important non-CO2 greenhouse gas fluxes, the potential for biophysical impacts, or dynamic successional changes. We propose three deployment types for ecosystem-scale flux measurements at various NCS scales to constrain wide uncertainties and chart a workable path forward: “pilot”, “upscale”, and “monitor”. Together, the integration of ecosystem-scale flux measurements by the NCS community and the prioritization of NCS measurements by the flux community, have the potential to improve accounting in ways that capture the net impacts, unintended feedbacks, and on-the-ground specifics of a wide range of emerging NCS strategies. 

Abstract Methane (CH₄) is a potent greenhouse gas (GHG) with atmospheric concentrations that have nearly tripled since pre‐industrial times. Wetlands account for a large share of global CH₄emissions, yet the magnitude and factors controlling CH₄fluxes in tidal wetlands remain uncertain. We synthesized CH₄flux data from 100 chamber and 9 eddy covariance (EC) sites across tidal marshes in the conterminous United States to assess controlling factors and improve predictions of CH₄emissions. This effort included creating an open‐source database of chamber‐based GHG fluxes (https://doi.org/10.25573/serc.14227085). Annual fluxes across chamber and EC sites averaged 26 ± 53 g CH₄m⁻² year⁻¹, with a median of 3.9 g CH₄m⁻² year⁻¹, and only 25% of sites exceeding 18 g CH₄m⁻² year⁻¹. The highest fluxes were observed at fresh‐oligohaline sites with daily maximum temperature normals (MATmax) above 25.6°C. These were followed by frequently inundated low and mid‐fresh‐oligohaline marshes with MATmax ≤25.6°C, and mesohaline sites with MATmax >19°C. Quantile regressions of paired chamber CH₄flux and porewater biogeochemistry revealed that the 90th percentile of fluxes fell below 5 ± 3 nmol m⁻² s⁻¹at sulfate concentrations >4.7 ± 0.6 mM, porewater salinity >21 ± 2 psu, or surface water salinity >15 ± 3 psu. Across sites, salinity was the dominant predictor of annual CH₄fluxes, while within sites, temperature, gross primary productivity (GPP), and tidal height controlled variability at diel and seasonal scales. At the diel scale, GPP preceded temperature in importance for predicting CH₄flux changes, while the opposite was observed at the seasonal scale. Water levels influenced the timing and pathway of diel CH₄fluxes, with pulsed releases of stored CH₄at low to rising tide. This study provides data and methods to improve tidal marsh CH₄emission estimates, support blue carbon assessments, and refine national and global GHG inventories.