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  1. Free, publicly-accessible full text available October 30, 2025
  2. We present a novel usage of Transformers to make image classification interpretable. Unlike mainstream classifiers that wait until the last fully connected layer to incorporate class information to make predictions, we investigate a proactive approach, asking each class to search for itself in an image. We realize this idea via a Transformer encoder-decoder inspired by DEtection TRansformer (DETR). We learn “class-specific” queries (one for each class) as input to the decoder, enabling each class to localize its patterns in an image via cross-attention. We name our approach INterpretable TRansformer (INTR), which is fairly easy to implement and exhibits several compelling properties. We show that INTR intrinsically encourages each class to attend distinctively; the cross-attention weights thus provide a faithful interpretation of the prediction. Interestingly, via “multi-head” cross-attention, INTR could identify different “attributes” of a class, making it particularly suitable for fine-grained classification and analysis, which we demonstrate on eight datasets. Our code and pre-trained models are publicly accessible at the Imageomics Institute GitHub site: https://github.com/Imageomics/INTR. 
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    Free, publicly-accessible full text available May 7, 2025
  3. Free, publicly-accessible full text available April 16, 2025
  4. Free, publicly-accessible full text available February 13, 2025
  5. We present a novel dataset for animal behavior recognition collected in-situ using video from drones flown over the Mpala Research Centre in Kenya. Videos from DJI Mavic 2S drones flown in January 2023 were acquired at 5.4K resolution in accordance with IACUC protocols, and processed to detect and track each animal in the frames. An image subregion centered on each animal was extracted and combined in sequence to form a “mini-scene”. Be-haviors were then manually labeled for each frame of each mini-scene by a team of annotators overseen by an expert behavioral ecologist. The resulting labeled mini-scenes form our resulting behavior dataset, consisting of more than 10 hours of annotated videos of reticulated gi-raffes, plains zebras, and Grevy's zebras, and encompassing seven types of animal behavior and an additional category for occlusions. Benchmark results for state-of-the-art behavioral recognition architectures show labeling accu-racy of 61.9% for macro-average (per class), and 86.7% for micro-average (per instance). Our dataset complements recent larger, more diverse animal behavior sets and smaller, more specialized ones by being collected in-situ and from drones, both important considerations for the future of an-imal behavior research. The dataset can be accessed at https://dirtmaxim.github.io/kabr. 
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  6. In situ imageomics is a new approach to study ecological, biological and evolutionary systems wherein large image and video data sets are captured in the wild and machine learning methods are used to infer biological traits of individual organisms, animal social groups, species, and even whole ecosystems. Monitoring biological traits over large spaces and long periods of time could enable new, data-driven approaches to wildlife conservation, biodiversity, and sustainable ecosystem management. However, to accurately infer biological traits, machine learning methods for images require voluminous and high quality data. Adaptive, data-driven approaches are hamstrung by the speed at which data can be captured and processed. Camera traps and unmanned aerial vehicles (UAVs) produce voluminous data, but lose track of individuals over large areas, fail to capture social dynamics, and waste time and storage on images with poor lighting and view angles. In this vision paper, we make the case for a research agenda for in situ imageomics that depends on significant advances in autonomic and self-aware computing. Precisely, we seek autonomous data collection that manages camera angles, aircraft positioning, conflicting actions for multiple traits of interest, energy availability, and cost factors. Given the tools to detect object and identify individuals, we propose a research challenge: Which optimization model should the data collection system employ to accurately identify, characterize, and draw inferences from biological traits while respecting a budget? Using zebra and giraffe behavioral data collected over three weeks at the Mpala Research Centre in Laikipia County, Kenya, we quantify the volume and quality of data collected using existing approaches. Our proposed autonomic navigation policy for in situ imageomics collection has an F1 score of 82% compared to an expert pilot, and provides greater safety and consistency, suggesting great potential for state-of-the-art autonomic approaches if they can be scaled up to fully address the problem. 
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  7. Ensuring fairness in computational problems has emerged as a key topic during recent years, buoyed by considerations for equitable resource distributions and social justice. It is possible to incorporate fairness in computational problems from several perspectives, such as using optimization, game-theoretic or machine learning frameworks. In this paper we address the problem of incorporation of fairness from a combinatorial optimization perspective. We formulate a combinatorial optimization framework, suitable for analysis by researchers in approximation algorithms and related areas, that incorporates fairness in maximum coverage problems as an interplay between two conflicting objectives. Fairness is imposed in coverage by using coloring constraints that minimizes the discrepancies between number of elements of different colors covered by selected sets; this is in contrast to the usual discrepancy minimization problems studied extensively in the literature where (usually two) colors are not given a priori but need to be selected to minimize the maximum color discrepancy of each individual set. Our main results are a set of randomized and deterministic approximation algorithms that attempts to simultaneously approximate both fairness and coverage in this framework. 
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  8. In late December 1973, the United States enacted what some would come to call “the pitbull of environmental laws.” In the 50 years since, the formidable regulatory teeth of the Endangered Species Act (ESA) have been credited with considerable successes, obliging agencies to draw upon the best available science to protect species and habitats. Yet human pressures continue to push the planet toward extinctions on a massive scale. With that prospect looming, and with scientific understanding ever changing, Science invited experts to discuss how the ESA has evolved and what its future might hold. 
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  9. In late December 1973, the United States enacted what some would come to call “the pitbull of environmental laws.” In the 50 years since, the formidable regulatory teeth of the Endangered Species Act (ESA) have been credited with considerable successes, obliging agencies to draw upon the best available science to protect species and habitats. Yet human pressures continue to push the planet toward extinctions on a massive scale. With that prospect looming, and with scientific understanding ever changing,Scienceinvited experts to discuss how the ESA has evolved and what its future might hold.—Brad Wible

     
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