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Trent, M Stephen; Konovalova, Anna (Ed.)ABSTRACT Almost all integral membrane proteins that reside in the outer membrane (OM) of gram-negative bacteria contain a closed amphipathic β sheet (“β barrel”) that serves as a membrane anchor. The membrane integration of β barrel structures is catalyzed by a highly conserved heterooligomer called thebarrelassemblymachine (BAM). Although charged residues that are exposed to the lipid bilayer are infrequently found in outer membrane protein β barrels, the β barrels of OmpC/OmpF-type trimeric porins produced by Enterobacterales contain multiple conserved lipid-facing basic residues located near the extracellular side of the OM. Here, we show that these residues are required for the efficient insertion of theEscherichia coliOmpC protein into the OMin vivo. We found that the mutation of multiple basic residues to glutamine or alanine slowed insertion and reduced insertion efficiency. Furthermore, molecular dynamics simulations provided evidence that the basic residues promote the formation of hydrogen bonds and salt bridges with lipopolysaccharide, a unique glycolipid located exclusively in the outer leaflet of the OM. Taken together, our results support a model in which hydrophilic interactions between OmpC and LPS help to anchor the protein in the OM when the local environment is perturbed by BAM during membrane insertion and suggest a surprising role for membrane lipids in the insertion reaction.IMPORTANCEThe assembly (folding and membrane insertion) of bacterial outer membrane proteins (OMPs) is an essential cellular process that is a potential target for novel antibiotics. A heterooligomer called thebarrelassemblymachine (BAM) plays a major role in catalyzing OMP assembly. Here, we show that a group of highly conserved lipid-facing basic residues inEscherichia coliOmpC, a member of a major family of abundant OMPs known as trimeric porins, is required for the efficient integration of the protein into the outer membrane (OM). Based on our work and previous studies, we propose that the basic residues form interactions with a unique OM lipid (lipopolysaccharide) that promotes the insertion reaction. Our results provide strong evidence that interactions between specific membrane lipids and at least a subset of OMPs are required to supplement the activity of BAM and facilitate the integration of the proteins into the membrane.more » « lessFree, publicly-accessible full text available March 12, 2026
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Free, publicly-accessible full text available November 19, 2025
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Accelerator based neutrino oscillation experiments seek to measure the relative number of electron and muon (anti)neutrinos at different values. However high statistics studies of neutrino interactions are almost exclusively measured using muon (anti)neutrinos since the dominant flavor of neutrinos produced by accelerator based beams are of the muon type. This work reports new measurements of electron (anti)neutrinos interactions in hydrocarbon, obtained by strongly suppressing backgrounds initiated by muon flavor (anti)neutrinos. Double differential cross sections as a function of visible energy transfer, , and transverse momentum transfer, , or three momentum transfer, are presented. Published by the American Physical Society2024more » « less
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Neutron production in antineutrino interactions can lead to bias in energy reconstruction in neutrino oscillation experiments, but these interactions have rarely been studied. MINERvA previously studied neutron production at an average antineutrino energy of ∼3 GeV in 2016 and found deficiencies in leading models. In this paper, the MINERvA 6 GeV average antineutrino energy dataset is shown to have similar disagreements. A measurement of the cross section for an antineutrino to produce two or more neutrons and have low visible energy is presented as an experiment-independent way to explore neutron production modeling. This cross section disagrees with several leading models’ predictions. Neutron modeling techniques from nuclear physics are used to quantify neutron detection uncertainties on this result.more » « less
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We present measurements of the cross section for antineutrino charged-current quasielasticlike scattering on hydrocarbon using the medium energy NuMI wide-band neutrino beam peaking at antineutrino energy hE¯νi ∼ 6 GeV. The measurements are presented as a function of the longitudinal momentum (pjj) and transverse momentum (pT) of the final state muon. This work complements our previously reported high statistics measurement in the neutrino channel and extends the previous antineutrino measurement made in a low energy beam at hE¯νi ∼ 3.5 GeV out to pT of 2.5 GeV=c. Current theoretical models do not completely describe the data in this previously unexplored high pT region. The single differential cross section as a function of four-momentum transfer (Q2 QE) now extends to 4 GeV2 with high statistics. The cross section as a function of Q2 QE shows that the tuned simulations developed by the MINERvA Collaboration that agreed well with the low energy beam measurements do not agree as well with the medium energy beam measurements. Newer neutrino interaction models such as the GENIE v3 tunes are better able to simulate the high Q2 QE region.more » « less
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