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Creators/Authors contains: "MILLER, SCOTT"

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  1. ABSTRACT Spatial processes, particularly scale‐dependent feedbacks, may play important and underappreciated roles in the dynamics of bistable ecosystems. For example, self‐organised spatial patterns can allow for stable coexistence of alternative states outside regions of bistability, a phenomenon known as a Busse balloon. We used partial differential equations to explore the potential for such dynamics in coral reefs, focusing on how herbivore behaviour and mobility affect the stability of coral‐ and macroalgal‐dominated states. Herbivore attraction to coral resulted in a Busse balloon that enhanced macroalgal resilience, with patterns persisting in regions of parameter space where nonspatial models predict uniform coral dominance. Thus, our work suggests herbivore association with coral (e.g., for shelter) can prevent reefs from reaching a fully coral‐dominated state. More broadly, this study illustrates how consumer space use can prevent ecosystems from undergoing wholesale state transitions, highlighting the importance of explicitly accounting for space when studying bistable systems. 
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    Free, publicly-accessible full text available March 1, 2026
  2. Free, publicly-accessible full text available October 16, 2025
  3. Small-scale fisheries provide seafood for billions of people and are one of the largest employers in many coastal communities. Those households engaged in these fisheries who maintain diverse income sources are generally thought to be better prepared to cope with social or ecological perturbations such as the crises presented by the COVID-19 pandemic. One outcome of the COVID-19 crisis was the collapse of international tourism after many nations instituted strict border controls to slow the virus’s spread, severely impacting coastal communities that depend on tourism-related employment. This research assessed the effects of COVID-19-induced collapse of tourism on small-scale coral reef fishers and households in Moorea, French Polynesia. Ninety-five households were surveyed about their livelihoods, fishing, demographics, and income-generating occupations before and after the lockdown. Shifts in fish biomass were evaluated using time series data collected through underwater visual surveys, and roadside fish vendors were surveyed to assess fish sales. Results showed that after tourism employment evaporated more Moorea households began fishing to boost their incomes and food security. However, the increase in fishing pressure showed no appreciable decline in the biomass of fishable species. The households responsible for the increased fishing activities were those who were working in the tourism economy prior to the pandemic and subsequently lost their jobs. Households that combined fishing with construction or other stable sectors showed greater abilities to cope, while those combining fishing with tourism were heavily impacted. Importantly, results showed that those households devoted solely to fishing managed the crisis adeptly due to their superior fishing skills and ecological knowledge. This pattern suggests that not all forms of household livelihood diversification confer equal advantages and that resource-dependent households are not necessarily intrinsically less resilient. More generally, it is argued that we should be cautious when promoting livelihood diversification as a blanket solution to decrease household vulnerability, and that ecological knowledge diversity is underappreciated. 
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    Free, publicly-accessible full text available December 6, 2025
  4. Denticula costata Hustedt was originally described from fossil material from Sumatra and later assigned to the genus Tetralunata. Although Tetralunata was thought to be endemic to Indonesia, D. costata has been reported from wetwalls from South Africa. This disparity in locality prompted us to investigate the D. costata in South Africa further. D. costata (now T. costata) specimens and the species reported from South Africa were different in size, shape, and structure of the raphe system. These differences, as well as comparisons to other Denticula species, allowed us to determine that the South African specimens have not been described previously. Valve ultrastructure, including the canal raphe, areolae with volate occlusions, and presence/structure of the septa suggest this new species belongs to the genus Tetralunata. This is the first report of Tetralunata from outside of Indonesia. Herein, we describe Tetraluanata schoemanii sp. nov. and its systematic placement close to, but separate from, Epithemia. This first report of Tetralunata from outside of Indonesia, increases our understanding of the genus range and displays a unique biogeographical pattern that warrants further investigation in the future. 
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  5. Abstract The Caribbean archipelago of Puerto Rico supports a diverse flora and fauna and is located in a region characterized by complex socio‐economic and environmental change. The diversity of entomofauna across Puerto Rico has received considerable attention in wide‐scale research over the last century, with particular emphasis on the order Lepidoptera as the subject of substantial taxonomic and ecological surveys. However, much of this work is incomplete, outdated, or has been obscured in gray literature. Thus, our primary objectives were to contextualize the role of past research in the current understanding of Puerto Rican Lepidoptera and to outline an agenda for future research. Specifically, we provide an overview of taxonomic, ecological, agricultural, and conservation Lepidoptera research in Puerto Rico and highlight key studies and historical datasets. We found that, despite a strong taxonomic legacy, native moth taxonomy remains poorly understood, except for a few major pests. Further, much of the recent Lepidoptera research has focused on short‐term evaluations of agricultural pests, necessitated by immediate economic needs. The current ecological status of Lepidoptera on the islands is unknown. Therefore, prioritizing ecological research could provide timely insight for understanding changing Lepidoptera diversity and distribution and for conserving this biologically and economically significant group. Greater emphasis on long‐term monitoring and digitization of museum collections would be particularly useful for quantifying past and forecasting future impacts of global change. Abstract in Spanish is available with online material. 
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  6. Abstract As genetic code expansion advances beyondl-α-amino acids to backbone modifications and new polymerization chemistries, delineating what substrates the ribosome can accommodate remains a challenge. TheEscherichia coliribosome tolerates non-l-α-amino acids in vitro, but few structural insights that explain how are available, and the boundary conditions for efficient bond formation are so far unknown. Here we determine a high-resolution cryogenic electron microscopy structure of theE. coliribosome containing α-amino acid monomers and use metadynamics simulations to define energy surface minima and understand incorporation efficiencies. Reactive monomers across diverse structural classes favour a conformational space where the aminoacyl-tRNA nucleophile is <4 Å from the peptidyl-tRNA carbonyl with a Bürgi–Dunitz angle of 76–115°. Monomers with free energy minima that fall outside this conformational space do not react efficiently. This insight should accelerate the in vivo and in vitro ribosomal synthesis of sequence-defined, non-peptide heterooligomers. 
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