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Where and under what conditions the transfer of energy between electromagnetic fields and particles takes place in the solar wind remains an open question. We investigate the conditions that promote the growth of kinetic instabilities predicted by linear theory to infer how turbulence and temperature-anisotropy-driven instabilities are interrelated. Using a large dataset from Solar Orbiter, we introduce the radial rate of strain, a novel measure computed from single-spacecraft data, which we interpret as a proxy for the double-adiabatic strain rate. The solar wind exhibits high absolute values of the radial rate of strain at locations with large temperature anisotropy. We measure the kurtosis and skewness of the radial rate of strain from the statistical moments to show that it is non-Gaussian for unstable intervals and increasingly intermittent at smaller scales with a power-law scaling. We conclude that the velocity field fluctuations in the solar wind contribute to the presence of temperature anisotropy sufficient to create potentially unstable conditions.more » « lessFree, publicly-accessible full text available December 1, 2025
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Pupko, Tal (Ed.)Abstract The clade Pancrustacea, comprising crustaceans and hexapods, is the most diverse group of animals on earth, containing over 80% of animal species and half of animal biomass. It has been the subject of several recent phylogenomic analyses, yet relationships within Pancrustacea show a notable lack of stability. Here, the phylogeny is estimated with expanded taxon sampling, particularly of malacostracans. We show small changes in taxon sampling have large impacts on phylogenetic estimation. By analyzing identical orthologs between two slightly different taxon sets, we show that the differences in the resulting topologies are due primarily to the effects of taxon sampling on the phylogenetic reconstruction method. We compare trees resulting from our phylogenomic analyses with those from the literature to explore the large tree space of pancrustacean phylogenetic hypotheses and find that statistical topology tests reject the previously published trees in favor of the maximum likelihood trees produced here. Our results reject several clades including Caridoida, Eucarida, Multicrustacea, Vericrustacea, and Syncarida. Notably, we find Copepoda nested within Allotriocarida with high support and recover a novel relationship between decapods, euphausiids, and syncarids that we refer to as the Syneucarida. With denser taxon sampling, we find Stomatopoda sister to this latter clade, which we collectively name Stomatocarida, dividing Malacostraca into three clades: Leptostraca, Peracarida, and Stomatocarida. A new Bayesian divergence time estimation is conducted using 13 vetted fossils. We review our results in the context of other pancrustacean phylogenetic hypotheses and highlight 15 key taxa to sample in future studies.more » « less
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At kinetic scales in the solar wind, instabilities transfer energy from particles to fluctuations in the electromagnetic fields while restoring plasma conditions towards thermodynamic equilibrium. We investigate the interplay between background turbulent fluctuations at the small-scale end of the inertial range and kinetic instabilities acting to reduce proton temperature anisotropy. We analyse in situ solar wind observations from the Solar Orbiter mission to develop a measure for variability in the magnetic field direction. We find that non-equilibrium conditions sufficient to cause micro-instabilities in the plasma coincide with elevated levels of variability. We show that our measure for the fluctuations in the magnetic field is non-ergodic in regions unstable to the growth of temperature anisotropy-driven instabilities. We conclude that the competition between the action of the turbulence and the instabilities plays a significant role in the regulation of the proton-scale energetics of the solar wind. This competition depends not only on the variability of the magnetic field but also on the spatial persistence of the plasma in non-equilibrium conditions.more » « less
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Abstract Using high-resolution data from Solar Orbiter, we investigate the plasma conditions necessary for the proton temperature-anisotropy-driven mirror-mode and oblique firehose instabilities to occur in the solar wind. We find that the unstable plasma exhibits dependencies on the angle between the direction of the magnetic field and the bulk solar wind velocity which cannot be explained by the double-adiabatic expansion of the solar wind alone. The angle dependencies suggest that perpendicular heating in Alfvénic wind may be responsible. We quantify the occurrence rate of the two instabilities as a function of the length of unstable intervals as they are convected over the spacecraft. This analysis indicates that mirror-mode and oblique firehose instabilities require a spatial interval of length greater than 2–3 unstable wavelengths in order to relax the plasma into a marginally stable state and thus closer to thermodynamic equilibrium in the solar wind. Our analysis suggests that the conditions for these instabilities to act effectively vary locally on scales much shorter than the correlation length of solar wind turbulence.more » « less
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Abstract Contamination of a genetic sample with DNA from one or more nontarget species is a continuing concern of molecular phylogenetic studies, both Sanger sequencing studies and next-generation sequencing studies. We developed an automated pipeline for identifying and excluding likely cross-contaminated loci based on the detection of bimodal distributions of patristic distances across gene trees. When contamination occurs between samples within a data set, a comparison between a contaminated sample and its contaminant taxon will yield bimodal distributions with one peak close to zero patristic distance. This new method does not rely on a priori knowledge of taxon relatedness nor does it determine the causes(s) of the contamination. Exclusion of putatively contaminated loci from a data set generated for the insect family Cicadidae showed that these sequences were affecting some topological patterns and branch supports, although the effects were sometimes subtle, with some contamination-influenced relationships exhibiting strong bootstrap support. Long tip branches and outlier values for one anchored phylogenomic pipeline statistic (AvgNHomologs) were correlated with the presence of contamination. While the anchored hybrid enrichment markers used here, which target hemipteroid taxa, proved effective in resolving deep and shallow level Cicadidae relationships in aggregate, individual markers contained inadequate phylogenetic signal, in part probably due to short length. The cleaned data set, consisting of 429 loci, from 90 genera representing 44 of 56 current Cicadidae tribes, supported three of the four sampled Cicadidae subfamilies in concatenated-matrix maximum likelihood (ML) and multispecies coalescent-based species tree analyses, with the fourth subfamily weakly supported in the ML trees. No well-supported patterns from previous family-level Sanger sequencing studies of Cicadidae phylogeny were contradicted. One taxon (Aragualna plenalinea) did not fall with its current subfamily in the genetic tree, and this genus and its tribe Aragualnini is reclassified to Tibicininae following morphological re-examination. Only subtle differences were observed in trees after the removal of loci for which divergent base frequencies were detected. Greater success may be achieved by increased taxon sampling and developing a probe set targeting a more recent common ancestor and longer loci. Searches for contamination are an essential step in phylogenomic analyses of all kinds and our pipeline is an effective solution. [Auchenorrhyncha; base-composition bias; Cicadidae; Cicadoidea; Hemiptera; phylogenetic conflict.]more » « less
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Metal-organic frameworks (MOFs) are nanoporous compounds composed of metal ions and organic linkers. MOFs play an important role in industrial applications such as gas separation, gas purification, and electrolytic catalysis. Important MOF properties such a potential energy are currently computed via techniques such as density functional theory (DFT). Although DFT provides accurate results, it is computationally costly. We propose a machine learning approach for estimating the potential energy of candidate MOFs, decomposing it into separate pair-wise atomic interactions using a graph neural network. Such a technique will allow high-throughput screening of candidates MOFs. We also generate a database of 50,000 spatial configurations and high quality potential energy values using DFT.more » « less
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A molecular phylogeny and a review of family-group classification are presented for 137 species (ca. 125 genera) of the insect family Cicadidae, the true cicadas, plus two species of hairy cicadas (Tettigarctidae) and two outgroup species from Cercopidae. Five genes, two of them mitochondrial, comprise the 4992 base-pair molecular dataset. Maximum-likelihood and Bayesian phylogenetic results are shown, including analyses to address potential base composition bias. Tettigarcta is confirmed as the sister-clade of the Cicadidae and support is found for three subfamilies identified in an earlier morphological cladistic analysis. A set of paraphyletic deep-level clades formed by African genera are together named as Tettigomyiinae n. stat. Taxonomic reassignments of genera and tribes are made where morphological examination confirms incorrect placements suggested by the molecular tree, and 11 new tribes are defined (Arenopsaltriini n. tribe, Durangonini n. tribe, Katoini n. tribe, Lacetasini n. tribe, Macrotristriini n. tribe, Malagasiini n. tribe, Nelcyndanini n. tribe, Pagiphorini n. tribe, Pictilini n. tribe, Psaltodini n. tribe, and Selymbriini n. tribe). Tribe Tacuini n. syn. is synonymized with Cryptotympanini, and Tryellina n. syn. is synonymized with an expanded Tribe Lamotialnini. Tribe Hyantiini n. syn. is synonymized with Fidicinini. Tribe Sinosenini is transferred to Cicadinae from Cicadettinae, Cicadatrini is moved to Cicadettinae from Cicadinae, and Ydiellini and Tettigomyiini are transferred to Tettigomyiinae n. stat from Cicadettinae. While the subfamily Cicadinae, historically defined by the presence of timbal covers, is weakly supported in the molecular tree, high taxonomic rank is not supported for several earlier clades based on unique morphology associated with sound production.more » « less
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