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Spinach is a nutritious leafy vegetable belonging to the family Chenopodiaceae. Here we report a high-quality chromosome-scale reference genome assembly of spinach and genome resequencing of 305 cultivated and wild spinach accessions. Reconstruction of ancestral Chenopodiaceae karyotype indicates substantial genome rearrangements in spinach after its divergence from ancestral Chenopodiaceae, coinciding with high repeat content in the spinach genome. Population genomic analyses provide insights into spinach genetic diversity and population differentiation. Genome-wide association studies of 20 agronomical traits identify numerous significantly associated regions and candidate genes for these traits. Domestication sweeps in the spinach genome are identified, some of which are associated with important traits (e.g., leaf phenotype, bolting and flowering), demonstrating the role of artificial selection in shaping spinach phenotypic evolution. This study provides not only insights into the spinach evolution and domestication but also valuable resources for facilitating spinach breeding.

We present the first Greenlandic tree ring oxygen isotope record (δ18OGTR), derived from four birch trees collected from the Qinguadalen Valley in southwestern Greenland in 1999. Our δ18O record spans from 1950–1999 and is significantly and positively correlated with winter ice core δ18O from southern Greenland. δ18OGTR records are positively correlated with southwestern Greenland January–August mean temperatures. North Atlantic Oscillation (NAO) reconstructions have been developed from a variety of proxies, but never with Greenlandic tree rings, and our δ18OGTR record is significantly correlated with NAO (r = −0.64), and spatial correlations with sea-level pressure indicate a classic NAO pressure seesaw pattern. These results may facilitate a longer NAO reconstruction based on long time series of tree ring δ18O records from Greenland, provided that subfossil wood can be found in areas vacated by melting glaciers.