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Abstract Life on Earth depends on the conversion of solar energy to chemical energy by plants through photosynthesis. A fundamental challenge in optimizing photosynthesis is to adjust leaf angles to efficiently use the intercepted sunlight under the constraints of heat stress, water loss and competition. Despite the importance of leaf angle, until recently, we have lacked data and frameworks to describe and predict leaf angle dynamics and their impacts on leaves to the globe. We review the role of leaf angle in studies of ecophysiology, ecosystem ecology and earth system science, and highlight the essential yet understudied role of leaf angle as an ecological strategy to regulate plant carbon–water–energy nexus and to bridge leaf, canopy and earth system processes. Using two models, we show that leaf angle variations have significant impacts on not only canopy‐scale photosynthesis, energy balance and water use efficiency but also light competition within the forest canopy. New techniques to measure leaf angles are emerging, opening opportunities to understand the rarely‐measured intraspecific, interspecific, seasonal and interannual variations of leaf angles and their implications to plant biology and earth system science. We conclude by proposing three directions for future research.more » « less
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Abstract Recent advances in satellite observations of solar‐induced chlorophyll fluorescence (SIF) provide a new opportunity to constrain the simulation of terrestrial gross primary productivity (GPP). Accurate representation of the processes driving SIF emission and its radiative transfer to remote sensing sensors is an essential prerequisite for data assimilation. Recently, SIF simulations have been incorporated into several land surface models, but the scaling of SIF from leaf‐level to canopy‐level is usually not well‐represented. Here, we incorporate the simulation of far‐red SIF observed at nadir into the Community Land Model version 5 (CLM5). Leaf‐level fluorescence yield was simulated by a parametric simplification of the Soil Canopy‐Observation of Photosynthesis and Energy fluxes model (SCOPE). And an efficient and accurate method based on escape probability is developed to scale SIF from leaf‐level to top‐of‐canopy while taking clumping and the radiative transfer processes into account. SIF simulated by CLM5 and SCOPE agreed well at sites except one in needleleaf forest (R2 > 0.91, root‐mean‐square error <0.19 W⋅m−2⋅sr−1⋅μm−1), and captured the day‐to‐day variation of tower‐measured SIF at temperate forest sites (R2 > 0.68). At the global scale, simulated SIF generally captured the spatial and seasonal patterns of satellite‐observed SIF. Factors including the fluorescence emission model, clumping, bidirectional effect, and leaf optical properties had considerable impacts on SIF simulation, and the discrepancies between simulate d and observed SIF varied with plant functional type. By improving the representation of radiative transfer for SIF simulation, our model allows better comparisons between simulated and observed SIF toward constraining GPP simulations.more » « less
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Summary Leaf angle distribution (LAD) in forest canopies affects estimates of leaf area, light interception, and global‐scale photosynthesis, but is often simplified to a single theoretical value. Here, we present TLSLeAF (Terrestrial Laser Scanning Leaf Angle Function), an automated open‐source method of deriving LADs from terrestrial laser scanning.TLSLeAF produces canopy‐scale leaf angle and LADs by relying on gridded laser scanning data. The approach increases processing speed, improves angle estimates, and requires minimal user input. Key features are automation, leaf–wood classification, beta parameter output, and implementation in R to increase accessibility for the ecology community.TLSLeAF precisely estimates leaf angle with minimal distance effects on angular estimates while rapidly producing LADs on a consumer‐grade machine. We challenge the popular spherical LAD assumption, showing sensitivity to ecosystem type in plant area index and foliage profile estimates that translate toc. 25% andc. 11% increases in canopy net photosynthesis (c. 25%) and solar‐induced chlorophyll fluorescence (c. 11%).TLSLeAF can now be applied to the vast catalog of laser scanning data already available from ecosystems around the globe. The ease of use will enable widespread adoption of the method outside of remote‐sensing experts, allowing greater accessibility for addressing ecological hypotheses and large‐scale ecosystem modeling efforts.more » « less
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Abstract Recent advances in remote sensing of solar‐induced chlorophyll fluorescence (SIF) have garnered wide interest from the biogeoscience and Earth system science communities, due to the observed linearity between SIF and gross primary productivity (GPP) at increasing spatiotemporal scales. Three recent studies, Maguire et al., (2020,https://doi.org/10.1029/2020GL087858), He et al. (2020,https://doi.org/10.1029/2020GL087474), and Marrs et al. (2020,https://doi.org/10.1029/2020GL087956) highlight a nonlinear relationship between fluorescence and photochemical yields and show empirical evidence for the decoupling of SIF, stomata, and the carbon reactions of photosynthesis. Such mechanistic studies help advance our understanding of what SIF is and what it is not. We argue that these findings are not necessarily contradictory to the linear SIF‐GPP relationship observed at the satellite scale and provide context for where, when, and why fluorescence and photosynthesis diverge at smaller spatiotemporal scales. Understanding scale dependencies of remote sensing data is crucial for interpreting SIF as a proxy for GPP.more » « less
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Abstract Trees regulate canopy temperature (Tc) via transpiration to maintain an optimal temperature range. In diverse forests such as those of the eastern United States, the sensitivity ofTcto changing environmental conditions may differ across species, reflecting wide variability in hydraulic traits. However, these links are not well understood in mature forests, whereTcdata have historically been difficult to obtain. Recent advancement of thermal imaging cameras (TICs) enablesTcmeasurement of previously inaccessible tall trees. By leveraging TIC and sap flux measurements, we investigated how co‐occurring trees (Quercus alba,Q. falcata, andPinus virginiana) change theirTcand vapor pressure deficit near the canopy surface (VPDc) in response to changing air temperature (Ta) and atmospheric VPD (VPDa). We found a weaker cooling effect for the species that most strongly regulates stomatal function during dry conditions (isohydric;P. virginiana). Specifically, the pine had higherTc(up to 1.3°C) and VPDc(up to 0.3 kPa) in the afternoon and smaller sensitivity of both∆T(=Tc − Ta) and∆VPD (=VPDc − VPDa) to changing conditions. Furthermore, significant differences inTcand VPDcbetween sunlit and shaded portions of a canopy implied a non‐evaporative effect onTcregulation. Specifically,Tcwas more homogeneous within the pine canopy, reflecting differences in leaf morphology that allow higher canopy transmittance of solar radiation. The variability ofTcamong species (up to 1.3°C) was comparable to the previously reported differences in surface temperature across land cover types (1°C to 2°C), implying the potential for significant impact of species composition change on local/regional surface temperature.more » « less
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Solar-induced chlorophyll fluorescence (SIF) is widely accepted as a proxy for gross primary productivity (GPP). Among the various SIF measurements, tower-based SIF measurements allow for continuous monitoring of SIF variation at a canopy scale with high temporal resolution, making it suitable for monitoring highly variable plant physiological responses to environmental changes. However, because of the strong and close relationship between SIF and absorbed photosynthetically active radiation (aPAR), it may be difficult to detect the influence of environmental drivers other than light conditions. Among the drivers, atmospheric dryness (vapor pressure deficit, VPD) is projected to increase as drought becomes more frequent and severe in the future, negatively impacting plants. In this study, we evaluated the tower-based high-frequency SIF measurement as a tool for detecting plant response to highly variable VPD. The study was performed in a mixed temperate forest in Virginia, USA, where a 40-m-tall flux tower has been measuring gas and energy exchanges and ancillary environmental drivers, and the Fluospec 2 system has been measuring SIF. We show that a proper definition of light availability to vegetation can reproduce SIF response to changing VPD that is comparable to GPP response as estimated from eddy covariance measurement: GPP decreased with rising VPD regardless of how aPAR was defined, whereas SIF decreased only when aPAR was defined as the PAR absorbed by chlorophyll (aPARchl) or simulated by a model (Soil Canopy Observation, Photochemistry and Energy fluxes, SCOPE). We simulated the effect of VPD on SIF with two different simulation modes of fluorescence emission representing contrasting moisture conditions, ‘Moderate’ and ‘Soil Moisture (SM) Stress’ modes. The decreasing SIF to rising VPD was only found in the SM Stress mode, implying that the SIF-VPD relationship depends on soil moisture conditions. Furthermore, we observed a similar response of SIF to VPD at hourly and daily scales, indicating that satellite measurements can be used to study the effects of environmental drivers other than light conditions. Finally, the definition of aPAR emphasizes the importance of canopy structure research to interpret remote sensing observations properly.more » « less
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Coastal forested wetlands support many endemic species, sequester substantial carbon stocks, and have been reduced in extent due to historic drainage and agricultural expansion. Many of these unique coastal ecosystems have been drained, while those that remain are now threatened by saltwater intrusion and sea level rise in hydrologically modified coastal landscapes. Several recent studies have documented rapid and accelerating losses of coastal forested wetlands in small areas of the Atlantic and Gulf coasts of North America, but the full extent of loss across North America’s Coastal Plain (NACP) has not been quantified. We used classified satellite imagery to document a net loss of 13,682 km2 (8%) of forested coastal wetlands across the NACP between 1996 and 2016. Most forests transitioned to scrub-shrub (53%) and marsh habitats (24%). Even within protected areas, we measured substantial rates of wetland deforestation and significant fragmentation of forested wetland habitats. Variation in the rate of sea level rise, the number of tropical storm landings, and the average elevation of coastal watersheds explained about 78% of the variation in coastal wetland deforestation extent along the south Atlantic and Gulf Coasts. The rate of coastal forest loss within the NACP (684 km2/y) exceeds the recent estimate of global losses of coastal mangroves (210 km2/y). At the current rate of deforestation, in the absence of widespread protection or restoration efforts, coastal forested wetlands may not persist into the next century.more » « less