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Summary The spring phenology has advanced significantly over recent decades with climate change, impacting large‐scale biogeochemical cycles, climate feedback, and other essential ecosystem processes. Although numerous prognostic models have been developed for spring phenology, regional analyses of the optimality (OPT) strategy model that incorporate environmental variables beyond temperature and photoperiod remain lacking.We investigated the roles of solar radiation (SR) and three water stress factors (precipitation (P), soil moisture, and vapor pressure deficit (VPD)) on spring phenology from 1982 to 2015 using the OPT model with Global Inventory Modeling and Mapping Studies NDVI3g dataset and environmental data from TerraClimate, CRU_TS, and Global Land Data Assimilation System across the Northern Hemisphere (> 30°N).Our results show that SR and water stress factors significantly impacted intrasite decadal spring phenology variability, with water stress factors dominant in grassland ecosystems while SR dominated in the rest of the ecosystem types. Enhanced models incorporating SR (OPT‐S) and VPD (OPT‐VPD) outperformed the original OPT model, likely due to improved representation of the adaptive strategy of spring phenology to optimize photosynthetic carbon gain while minimizing frost risk.Our research enhances the understanding of the key environmental drivers influencing decadal spring phenology variation in the Northern Hemisphere and contributes to more accurate forecasts of ecological responses to global environmental change. 

Abstract Predicting tropical tree demography is a key challenge in understanding the future dynamics of tropical forests. Although demographic processes are known to be regulated by leaf trait diversity, only the effect of inter‐specific trait variation has been evaluated, and it remains unclear as to what degree the intra‐specific trait plasticity across light gradients (hereafter light plasticity) regulates tree demography, and how this will further shape long‐term community and ecosystem dynamics. By combining in situ trait measurements and forest census data with a terrestrial biosphere model, we evaluated the impact of observation‐constrained light plasticity on demography, forest structure, and biomass dynamics in a Panamanian tropical moist forest. Modeled leaf physiological traits vary across and within plant functional types (PFT), which represent the inter‐specific trait variation and the intra‐specific light plasticity, respectively. The simulation using three non‐plastic PFTs underestimated 20‐year average understory growth rates by 41%, leading to a biased forest size structure and leaf area profile, and a 44% underestimate in long‐term biomass. The simulation using three plastic PFTs generated accurate understory growth rates, resulting in a realistic forest structure and a smaller biomass underestimate of 15%. Expanding simulated trait diversity using 18 nonplastic PFTs similarly improved the prediction of demography and biomass. However, only the plasticity‐enabled model predicted realistic long‐term PFT composition and within‐canopy trait profiles. Our results highlight the distinct role of light plasticity in regulating forest dynamics that cannot be replaced by inter‐specific trait diversity. Accurately representing light plasticity is thus crucial for trait‐based prediction of tropical forest dynamics. 

Abstract Tropical forest diversity governs forest structures, compositions, and influences the ecosystem response to environmental changes. Better representation of forest diversity in ecosystem demography (ED) models within Earth system models is thus necessary to accurately capture and predict how tropical forests affect Earth system dynamics subject to climate changes. However, achieving forest coexistence in ED models is challenging due to their computational expense and limited understanding of the mechanisms governing forest functional diversity. This study applies the advanced Multi‐Objective Population‐based Parallel Local Surrogate‐assisted search (MOPLS) optimization algorithm to simultaneously calibrate ecosystem fluxes and coexistence of two physiologically distinct tropical forest species in a size‐ and age‐structured ED model with realistic representation of wood harvest. MOPLS exhibits satisfactory model performance, capturing hydrological and biogeochemical dynamics observed in Barro Colorado Island, Panama, and robustly achieving coexistence for the two representative forest species. This demonstrates its effectiveness in calibrating tropical forest coexistence. The optimal solution is applied to investigate the recovery trajectories of forest biomass after various intensities of clear‐cut deforestation. We find that a 20% selective logging can take approximately 40 years for aboveground biomass to return to the initial level. This is due to the slow recovery rate of late successional trees, which only increases by 4% over the 40‐year period. This study lays the foundation to calibrate coexistence in ED models. MOPLS can be an effective tool to help better represent tropical forest diversity in Earth system models and inform forest management practices. 

Synopsis Classic debates in community ecology focused on the complexities of considering an ecosystem as a super-organ or organism. New consideration of such perspectives could clarify mechanisms underlying the dynamics of forest carbon dioxide (CO2) uptake and water vapor loss, important for predicting and managing the future of Earth’s ecosystems and climate system. Here, we provide a rubric for considering ecosystem traits as aggregated, systemic, or emergent, i.e., representing the ecosystem as an aggregate of its individuals or as a metaphorical or literal super-organ or organism. We review recent approaches to scaling-up plant water relations (hydraulics) concepts developed for organs and organisms to enable and interpret measurements at ecosystem-level. We focus on three community-scale versions of water relations traits that have potential to provide mechanistic insight into climate change responses of forest CO2 and H2O gas exchange and productivity: leaf water potential (Ψcanopy), pressure volume curves (eco-PV), and hydraulic conductance (Keco). These analyses can reveal additional ecosystem-scale parameters analogous to those typically quantified for leaves or plants (e.g., wilting point and hydraulic vulnerability) that may act as thresholds in forest responses to drought, including growth cessation, mortality, and flammability. We unite these concepts in a novel framework to predict Ψcanopy and its approaching of critical thresholds during drought, using measurements of Keco and eco-PV curves. We thus delineate how the extension of water relations concepts from organ- and organism-scales can reveal the hydraulic constraints on the interaction of vegetation and climate and provide new mechanistic understanding and prediction of forest water use and productivity. 

Abstract Arctic wetlands are known methane (CH₄) emitters but recent studies suggest that the Arctic CH₄sink strength may be underestimated. Here we explore the capacity of well-drained Arctic soils to consume atmospheric CH₄using >40,000 hourly flux observations and spatially distributed flux measurements from 4 sites and 14 surface types. While consumption of atmospheric CH₄occurred at all sites at rates of 0.092 ± 0.011 mgCH₄ m⁻² h⁻¹(mean ± s.e.), CH₄uptake displayed distinct diel and seasonal patterns reflecting ecosystem respiration. Combining in situ flux data with laboratory investigations and a machine learning approach, we find biotic drivers to be highly important. Soil moisture outweighed temperature as an abiotic control and higher CH₄uptake was linked to increased availability of labile carbon. Our findings imply that soil drying and enhanced nutrient supply will promote CH₄uptake by Arctic soils, providing a negative feedback to global climate change. 

Abstract Climate change is rapidly altering composition, structure, and functioning of the boreal biome, across North America often broadly categorized into ecoregions. The resulting complex changes in different ecoregions present a challenge for efforts to accurately simulate carbon dioxide (CO₂) and energy exchanges between boreal forests and the atmosphere with terrestrial ecosystem models (TEMs). Eddy covariance measurements provide valuable information for evaluating the performance of TEMs and guiding their development. Here, we compiled a boreal forest model benchmarking dataset for North America by harmonizing eddy covariance and supporting measurements from eight black spruce (Picea mariana)-dominated, mature forest stands. The eight forest stands, located in six boreal ecoregions of North America, differ in stand characteristics, disturbance history, climate, permafrost conditions and soil properties. By compiling various data streams, the benchmarking dataset comprises data to parameterize, force, and evaluate TEMs. Specifically, it includes half-hourly, gap-filled meteorological forcing data, ancillary data essential for model parameterization, and half-hourly, gap-filled or partitioned component flux data on CO₂(net ecosystem production, gross primary production [GPP], and ecosystem respiration [ER]) and energy (latent [LE] and sensible heat [H]) and their daily aggregates screened based on half-hourly gap-filling quality criteria. We present a case study with the Canadian Land Surface Scheme Including Biogeochemical Cycles (CLASSIC) to: (1) demonstrate the utility of our dataset to benchmark TEMs and (2) provide guidance for model development and refinement. Model skill was evaluated using several statistical metrics and further examined through the flux responses to their environmental controls. Our results suggest that CLASSIC tended to overestimate GPP and ER among all stands. Model performance regarding the energy fluxes (i.e., LE and H) varied greatly among the stands and exhibited a moderate correlation with latitude. We identified strong relationships between simulated fluxes and their environmental controls except for H, thus highlighting current strengths and limitations of CLASSIC. 

Abstract Within vascular plants, the partitioning of hydraulic resistance along the soil‐to‐leaf continuum affects transpiration and its response to environmental conditions. In trees, the fractional contribution of leaf hydraulic resistance (R_leaf) to total soil‐to‐leaf hydraulic resistance (R_total), or fR_leaf(=R_leaf/R_total), is thought to be large, but this has not been tested comprehensively. We compiled a multibiome data set of fR_leafusing new and previously published measurements of pressure differences within trees in situ. Across 80 samples, fR_leafaveraged 0.51 (95% confidence interval [CI] = 0.46−0.57) and it declined with tree height. We also used the allometric relationship between field‐based measurements of soil‐to‐leaf hydraulic conductance and laboratory‐based measurements of leaf hydraulic conductance to compute the average fR_leaffor 19 tree samples, which was 0.40 (95% CI = 0.29−0.56). The in situ technique produces a more accurate descriptor of fR_leafbecause it accounts for dynamic leaf hydraulic conductance. Both approaches demonstrate the outsized role of leaves in controlling tree hydrodynamics. A larger fR_leafmay help stems from loss of hydraulic conductance. Thus, the decline in fR_leafwith tree height would contribute to greater drought vulnerability in taller trees and potentially to their observed disproportionate drought mortality. 

Abstract In tropical forests, both vegetation characteristics and soil properties are important not only for controlling energy, water, and gas exchanges directly but also determining the competition among species, successional dynamics, forest structure and composition. However, the joint effects of the two factors have received limited attention in Earth system model development. Here we use a vegetation demographic model, the Functionally Assembled Terrestrial Ecosystem Simulator (FATES) implemented in the Energy Exascale Earth System Model (E3SM) Land Model (ELM), ELM‐FATES, to explore how plant traits and soil properties affect tropical forest growth and composition concurrently. A large ensemble of simulations with perturbed vegetation and soil hydrological parameters is conducted at the Barro Colorado Island, Panama. The simulations are compared against observed carbon, energy, and water fluxes. We find that soil hydrological parameters, particularly the scaling exponent of the soil retention curve (B_sw), play crucial roles in controlling forest diversity, with higherB_swvalues (>7) favoring late successional species in competition, and lowerB_swvalues (1 ∼ 7) promoting the coexistence of early and late successional plants. Considering the additional impact of soil properties resolves a systematic bias of FATES in simulating sensible/latent heat partitioning with repercussion on water budget and plant coexistence. A greater fraction of deeper tree roots can help maintain the dry‐season soil moisture and plant gas exchange. As soil properties are as important as vegetation parameters in predicting tropical forest dynamics, more efforts are needed to improve parameterizations of soil functions and belowground processes and their interactions with aboveground vegetation dynamics. 

Summary Deep‐water access is arguably the most effective, but under‐studied, mechanism that plants employ to survive during drought. Vulnerability to embolism and hydraulic safety margins can predict mortality risk at given levels of dehydration, but deep‐water access may delay plant dehydration. Here, we tested the role of deep‐water access in enabling survival within a diverse tropical forest community in Panama using a novel data‐model approach.We inversely estimated the effective rooting depth (ERD, as the average depth of water extraction), for 29 canopy species by linking diameter growth dynamics (1990–2015) to vapor pressure deficit, water potentials in the whole‐soil column, and leaf hydraulic vulnerability curves. We validated ERD estimates against existing isotopic data of potential water‐access depths.Across species, deeper ERD was associated with higher maximum stem hydraulic conductivity, greater vulnerability to xylem embolism, narrower safety margins, and lower mortality rates during extreme droughts over 35 years (1981–2015) among evergreen species. Species exposure to water stress declined with deeper ERD indicating that trees compensate for water stress‐related mortality risk through deep‐water access.The role of deep‐water access in mitigating mortality of hydraulically‐vulnerable trees has important implications for our predictive understanding of forest dynamics under current and future climates.