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1. Deblending and classifying astronomical sources with Mask R-CNN deep learning

   https://doi.org/10.1093/mnras/stz2845  

   Burke, Colin J. ; Aleo, Patrick D. ; Chen, Yu-Ching ; Liu, Xin ; Peterson, John R. ; Sembroski, Glenn H. ; Lin, Joshua Yao-Yu ( October 2019 , Monthly Notices of the Royal Astronomical Society)

   We apply a new deep learning technique to detect, classify, and deblend sources in multiband astronomical images. We train and evaluate the performance of an artificial neural network built on the Mask Region-based Convolutional Neural Network image processing framework, a general code for efficient object detection, classification, and instance segmentation. After evaluating the performance of our network against simulated ground truth images for star and galaxy classes, we find a precision of 92 per cent at 80 per cent recall for stars and a precision of 98 per cent at 80 per cent recall for galaxies in a typical field with ∼30 galaxies arcmin−2. We investigate the deblending capability of our code, and find that clean deblends are handled robustly during object masking, even for significantly blended sources. This technique, or extensions using similar network architectures, may be applied to current and future deep imaging surveys such as Large Synoptic Survey Telescope and Wide-Field Infrared Survey Telescope. Our code, astro r-cnn, is publicly available at https://github.com/burke86/astro_rcnn.

    

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2. Detection, instance segmentation, and classification for astronomical surveys with deep learning ( deepdisc ): detectron2 implementation and demonstration with Hyper Suprime-Cam data

   https://doi.org/10.1093/mnras/stad2785  

   Merz, Grant ; Liu, Yichen ; Burke, Colin J. ; Aleo, Patrick D. ; Liu, Xin ; Carrasco Kind, Matias ; Kindratenko, Volodymyr ; Liu, Yufeng ( September 2023 , Monthly Notices of the Royal Astronomical Society)

   The next generation of wide-field deep astronomical surveys will deliver unprecedented amounts of images through the 2020s and beyond. As both the sensitivity and depth of observations increase, more blended sources will be detected. This reality can lead to measurement biases that contaminate key astronomical inferences. We implement new deep learning models available through Facebook AI Research’s detectron2 repository to perform the simultaneous tasks of object identification, deblending, and classification on large multiband co-adds from the Hyper Suprime-Cam (HSC). We use existing detection/deblending codes and classification methods to train a suite of deep neural networks, including state-of-the-art transformers. Once trained, we find that transformers outperform traditional convolutional neural networks and are more robust to different contrast scalings. Transformers are able to detect and deblend objects closely matching the ground truth, achieving a median bounding box Intersection over Union of 0.99. Using high-quality class labels from the Hubble Space Telescope, we find that when classifying objects as either stars or galaxies, the best-performing networks can classify galaxies with near 100 per cent completeness and purity across the whole test sample and classify stars above 60 per cent completeness and 80 per cent purity out to HSC i-band magnitudes of 25 mag. This framework can be extended to other upcoming deep surveys such as the Legacy Survey of Space and Time and those with the Roman Space Telescope to enable fast source detection and measurement. Our code, deepdisc, is publicly available at https://github.com/grantmerz/deepdisc.

    

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3. Transfer learning for galaxy feature detection: Finding giant star-forming clumps in low-redshift galaxies using Faster Region-based Convolutional Neural Network

   https://doi.org/10.1093/rasti/rzae013  

   Popp, Jürgen J. ; Dickinson, Hugh ; Serjeant, Stephen ; Walmsley, Mike ; Adams, Dominic ; Fortson, Lucy ; Mantha, Kameswara ; Mehta, Vihang ; Dawson, James M. ; Kruk, Sandor ; et al ( April 2024 , RAS Techniques and Instruments)

   Giant star-forming clumps (GSFCs) are areas of intensive star-formation that are commonly observed in high-redshift (z ≳ 1) galaxies but their formation and role in galaxy evolution remain unclear. Observations of low-redshift clumpy galaxy analogues are rare but the availability of wide-field galaxy survey data makes the detection of large clumpy galaxy samples much more feasible. Deep Learning (DL), and in particular Convolutional Neural Networks (CNNs), have been successfully applied to image classification tasks in astrophysical data analysis. However, one application of DL that remains relatively unexplored is that of automatically identifying and localizing specific objects or features in astrophysical imaging data. In this paper, we demonstrate the use of DL-based object detection models to localize GSFCs in astrophysical imaging data. We apply the Faster Region-based Convolutional Neural Network object detection framework (FRCNN) to identify GSFCs in low-redshift (z ≲ 0.3) galaxies. Unlike other studies, we train different FRCNN models on observational data that was collected by the Sloan Digital Sky Survey and labelled by volunteers from the citizen science project ‘Galaxy Zoo: Clump Scout’. The FRCNN model relies on a CNN component as a ‘backbone’ feature extractor. We show that CNNs, that have been pre-trained for image classification using astrophysical images, outperform those that have been pre-trained on terrestrial images. In particular, we compare a domain-specific CNN – ‘Zoobot’ – with a generic classification backbone and find that Zoobot achieves higher detection performance. Our final model is capable of producing GSFC detections with a completeness and purity of ≥0.8 while only being trained on ∼5000 galaxy images.

    

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4. Efficient pollen grain classification using pre-trained Convolutional Neural Networks: a comprehensive study

   https://doi.org/10.1186/s40537-023-00815-3  

   Rostami, Masoud A. ; Balmaki, Behnaz ; Dyer, Lee A. ; Allen, Julie M. ; Sallam, Mohamed F. ; Frontalini, Fabrizio ( December 2023 , Journal of Big Data)

   Pollen identification is necessary for several subfields of geology, ecology, and evolutionary biology. However, the existing methods for pollen identification are laborious, time-consuming, and require highly skilled scientists. Therefore, there is a pressing need for an automated and accurate system for pollen identification, which can be beneficial for both basic research and applied issues such as identifying airborne allergens. In this study, we propose a deep learning (DL) approach to classify pollen grains in the Great Basin Desert, Nevada, USA. Our dataset consisted of 10,000 images of 40 pollen species. To mitigate the limitations imposed by the small volume of our training dataset, we conducted an in-depth comparative analysis of numerous pre-trained Convolutional Neural Network (CNN) architectures utilizing transfer learning methodologies. Simultaneously, we developed and incorporated an innovative CNN model, serving to augment our exploration and optimization of data modeling strategies. We applied different architectures of well-known pre-trained deep CNN models, including AlexNet, VGG-16, MobileNet-V2, ResNet (18, 34, and 50, 101), ResNeSt (50, 101), SE-ResNeXt, and Vision Transformer (ViT), to uncover the most promising modeling approach for the classification of pollen grains in the Great Basin. To evaluate the performance of the pre-trained deep CNN models, we measured accuracy, precision, F1-Score, and recall. Our results showed that the ResNeSt-110 model achieved the best performance, with an accuracy of 97.24%, precision of 97.89%, F1-Score of 96.86%, and recall of 97.13%. Our results also revealed that transfer learning models can deliver better and faster image classification results compared to traditional CNN models built from scratch. The proposed method can potentially benefit various fields that rely on efficient pollen identification. This study demonstrates that DL approaches can improve the accuracy and efficiency of pollen identification, and it provides a foundation for further research in the field.

    

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5. A Spatial AI-Based Agricultural Robotic Platform for Wheat Detection and Collision Avoidance

   https://doi.org/10.3390/ai3030042  

   Gunturu, Sujith ; Munir, Arslan ; Ullah, Hayat ; Welch, Stephen ; Flippo, Daniel ( September 2022 , AI)

   To obtain more consistent measurements through the course of a wheat growing season, we conceived and designed an autonomous robotic platform that performs collision avoidance while navigating in crop rows using spatial artificial intelligence (AI). The main constraint the agronomists have is to not run over the wheat while driving. Accordingly, we have trained a spatial deep learning model that helps navigate the robot autonomously in the field while avoiding collisions with the wheat. To train this model, we used publicly available databases of prelabeled images of wheat, along with the images of wheat that we have collected in the field. We used the MobileNet single shot detector (SSD) as our deep learning model to detect wheat in the field. To increase the frame rate for real-time robot response to field environments, we trained MobileNet SSD on the wheat images and used a new stereo camera, the Luxonis Depth AI Camera. Together, the newly trained model and camera could achieve a frame rate of 18–23 frames per second (fps)—fast enough for the robot to process its surroundings once every 2–3 inches of driving. Once we knew the robot accurately detects its surroundings, we addressed the autonomous navigation of the robot. The new stereo camera allows the robot to determine its distance from the trained objects. In this work, we also developed a navigation and collision avoidance algorithm that utilizes this distance information to help the robot see its surroundings and maneuver in the field, thereby precisely avoiding collisions with the wheat crop. Extensive experiments were conducted to evaluate the performance of our proposed method. We also compared the quantitative results obtained by our proposed MobileNet SSD model with those of other state-of-the-art object detection models, such as the YOLO V5 and Faster region-based convolutional neural network (R-CNN) models. The detailed comparative analysis reveals the effectiveness of our method in terms of both model precision and inference speed.

    

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