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1. The Rhizosphere Responds: Rich Fen Peat and Root Microbial Ecology after Long-Term Water Table Manipulation

   https://doi.org/10.1128/AEM.00241-21  

   Rupp, Danielle L.; Lamit, Louis J.; Techtmann, Stephen M.; Kane, Evan S.; Lilleskov, Erik A.; Turetsky, Merritt R. (May 2021, Applied and Environmental Microbiology)

   Stams, Alfons J. (Ed.)

   ABSTRACT Hydrologic shifts due to climate change will affect the cycling of carbon (C) stored in boreal peatlands. Carbon cycling in these systems is carried out by microorganisms and plants in close association. This study investigated the effects of experimentally manipulated water tables (lowered and raised) and plant functional groups on the peat and root microbiomes in a boreal rich fen. All samples were sequenced and processed for bacterial, archaeal (16S DNA genes; V4), and fungal (internal transcribed spacer 2 [ITS2]) DNA. Depth had a strong effect on microbial and fungal communities across all water table treatments. Bacterial and archaeal communities were most sensitive to the water table treatments, particularly at the 10- to 20-cm depth; this area coincides with the rhizosphere or rooting zone. Iron cyclers, particularly members of the family Geobacteraceae , were enriched around the roots of sedges, horsetails, and grasses. The fungal community was affected largely by plant functional group, especially cinquefoils. Fungal endophytes (particularly Acephala spp.) were enriched in sedge and grass roots, which may have underappreciated implications for organic matter breakdown and cycling. Fungal lignocellulose degraders were enriched in the lowered water table treatment. Our results were indicative of two main methanogen communities, a rooting zone community dominated by the archaeal family Methanobacteriaceae and a deep peat community dominated by the family Methanomicrobiaceae . IMPORTANCE This study demonstrated that roots and the rooting zone in boreal fens support organisms likely capable of methanogenesis, iron cycling, and fungal endophytic association and are directly or indirectly affecting carbon cycling in these ecosystems. These taxa, which react to changes in the water table and associate with roots and, particularly, graminoids, may gain greater biogeochemical influence, as projected higher precipitation rates could lead to an increased abundance of sedges and grasses in boreal fens. 

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2. A decade of boreal rich fen greenhouse gas fluxes in response to natural and experimental water table variability

   https://doi.org/10.1111/gcb.13612  

   Olefeldt, David; Euskirchen, Eugénie_S; Harden, Jennifer; Kane, Evan; McGuire, A_David; Waldrop, Mark_P; Turetsky, Merritt_R (January 2017, Global Change Biology)

   Abstract Rich fens are common boreal ecosystems with distinct hydrology, biogeochemistry and ecology that influence their carbon (C) balance. We present growing season soil chamber methane emission (F_CH4), ecosystem respiration (ER), net ecosystem exchange (NEE) and gross primary production (GPP) fluxes from a 9‐years water table manipulation experiment in an Alaskan rich fen. The study included major flood and drought years, where wetting and drying treatments further modified the severity of droughts. Results support previous findings from peatlands that drought causes reduced magnitude of growing seasonF_CH4,GPPandNEE, thus reducing or reversing their C sink function. Experimentally exacerbated droughts further reduced the capacity for the fen to act as a C sink by causing shifts in vegetation and thus reducing magnitude of maximum growing seasonGPPin subsequent flood years by ~15% compared to control plots. Conversely, water table position had only a weak influence onER, but dominant contribution toERswitched from autotrophic respiration in wet years to heterotrophic in dry years. Droughts did not cause inter‐annual lag effects onERin this rich fen, as has been observed in several nutrient‐poor peatlands. WhileERwas dependent on soil temperatures at 2 cm depth,F_CH4was linked to soil temperatures at 25 cm. Inter‐annual variability of deep soil temperatures was in turn dependent on wetness rather than air temperature, and higherF_CH4in flooded years was thus equally due to increased methane production at depth and decreased methane oxidation near the surface. Short‐term fluctuations in wetness caused significant lag effects onF_CH4, but droughts caused no inter‐annual lag effects onF_CH4. Our results show that frequency and severity of droughts and floods can have characteristic effects on the exchange of greenhouse gases, and emphasize the need to project future hydrological regimes in rich fens. 

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3. Fresh Air for the Mire-Breathing Hypothesis: Sphagnum Moss and Peat Structure Regulate the Response of CO2 Exchange to Altered Hydrology in a Northern Peatland Ecosystem

   https://doi.org/10.3390/w14203239  

   O’Neill, Ally; Tucker, Colin; Kane, Evan S. (October 2022, Water)

   Sphagnum-dominated peatlands store more carbon than all of Earth’s forests, playing a large role in the balance of carbon dioxide. However, these carbon sinks face an uncertain future as the changing climate is likely to cause water stress, potentially reducing Sphagnum productivity and transitioning peatlands to carbon sources. A mesocosm experiment was performed on thirty-two peat cores collected from two peatland landforms: elevated mounds (hummocks) and lower, flat areas of the peatland (hollows). Both rainfall treatments and water tables were manipulated, and CO2 fluxes were measured. Other studies have observed peat subsiding and tracking the water table downward when experiencing water stress, thought to be a self-preservation technique termed ‘Mire-breathing’. However, we found that hummocks tended to compress inwards, rather than subsiding towards the lowered water table as significantly as hollows. Lower peat height was linearly associated with reduced gross primary production (GPP) in response to lowered water tables, indicating that peat subsidence did not significantly enhance the resistance of GPP to drought. Conversely, Sphagnum peat compression was found to stabilize GPP, indicating that this mechanism of resilience to drought may transmit across the landscape depending on which Sphagnum landform types are dominant. This study draws direct connections between Sphagnum traits and peatland hydrology and carbon cycling. 

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4. A Voucher Flora of Diatoms from Fens in the Tanana River Floodplain, Alaska

   https://doi.org/10.3390/w15152803  

   Hamilton, Veronica A; Lee, Sylvia S; Rober, Allison R; Furey, Paula C; Manoylov, Kalina M; Wyatt, Kevin H (August 2023, Water)

   Climate change and human activities may alter the structure and function of boreal peatlands by warming waters and changing their hydrology. Diatoms can be used to assess or track these changes. However, effective biomonitoring requires consistent, reliable identification. To address this need, this study developed a diatom voucher flora of species found across a boreal fen gradient (e.g., vegetation) in interior Alaskan peatlands. Composite diatom samples were collected bi-weekly from three peatland complexes over the 2017 summer. The morphological range of each taxon was imaged. The fens contained 184 taxa across 38 genera. Eunotia (45), Gomphonema (23), and Pinnularia (20) commonly occurred in each peatland. Tabellaria was common in the rich and moderate fen but sparse in the poor fen. Eunotia showed the opposite trend. Approximately 11% of species are potentially novel and 25% percent matched those at risk or declining in status on the diatom Red List (developed in Germany), highlighting the conservation value of boreal wetlands. This voucher flora expands knowledge of regional diatom biodiversity and provides updated, verifiable taxonomic information for inland Alaskan diatoms, building on Foged’s 1981 treatment. This flora strengthens the potential to effectively track changes in boreal waterways sensitive to climate change and anthropogenic stressors. 

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5. Dissolved organic matter in peat and marl marshes varies with nutrient enrichment and restored hydrology

   https://doi.org/10.1111/rec.13905  

   Anderson, Kenneth J.; Kominoski, John S.; Nocentini, Andrea; Hoffman, Sophia (April 2023, Restoration Ecology)

   Dissolved organic matter (DOM) drives biogeochemical processes in aquatic ecosystems. Yet, how hydrologic restoration in nutrient‐enriched ecosystems changes DOM and the consequences of those changes for the carbon cycle remain unclear. To predict the consequences of hydrologic restoration on carbon cycling in restored wetlands, we need to understand how local environmental factors influence production, processing, and transport of DOM. We collected surface water samples along transects in restored peat (organic‐rich, macrophyte‐dominated) and marl (carbonate, periphyton‐dominated) freshwater marshes in the Everglades (Florida, U.S.A.) that varied in environmental factors (water depth, phosphorus [P] concentrations [water, macrophytes, periphyton, and soil], and primary producer biomass) to understand drivers of dissolved organic carbon (DOC) concentrations and DOM composition. Higher water depths led to a “greening” of DOM, due to increasing algal contributions, with decreasing concentrations of DOC in peat wetlands, and a “browning” of DOM, due to increasing humic contributions, with increasing DOC concentrations in marl wetlands. Soil total P was positively correlated with DOC concentrations and microbial contributions to DOM in peat wetlands, and periphyton total P was positively correlated with algal contributions to DOM in marl wetlands. Despite large variations in both vegetation biomass and periphyton biovolume across transects and sites, neither were predictors of DOC concentrations or DOM composition. Hydrologic restoration differentially alters DOM in peat and marl marshes and interacts with nutrient enrichment to shift proportions of green and brown contributions to surface water chemistry, which has the potential to modify wetland food webs, as well as the processing of carbon by micro‐organisms. 

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