- Award ID(s):
- 2018144
- NSF-PAR ID:
- 10230172
- Date Published:
- Journal Name:
- Organic & Biomolecular Chemistry
- Volume:
- 19
- Issue:
- 8
- ISSN:
- 1477-0520
- Page Range / eLocation ID:
- 1835 to 1846
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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Abstract The synthesis and reactivity of 3,8‐dibromo‐dodecafluoro‐benzo‐fused BOPHY
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Hydrogen-rich cation radicals (GATT + 2H) + ˙ and (AGTT + 2H) + ˙ represent oligonucleotide models of charged hydrogen atom adducts to DNA. These tetranucleotide cation radicals were generated in the gas phase by one-electron reduction of the respective (GATT + 2H) 2+ and (AGTT + 2H) 2+ dications in which the charging protons were placed on the guanine and adenine nucleobases. We used wavelength-dependent UV/Vis photodissociation in the valence-electron excitation region of 210–700 nm to produce action spectra of (GATT + 2H) + ˙ and (AGTT + 2H) + ˙ that showed radical-associated absorption bands in the near-UV (330 nm) and visible (400–440 nm) regions. Born–Oppenheimer molecular dynamics and density-functional theory calculations were used to obtain and rank by energy multiple (GATT + 2H) dication and cation-radical structures. Time-dependent density functional theory (TD-DFT) calculations of excited-state energies and electronic transitions in (GATT + 2H) + ˙ were augmented by vibronic spectra calculations at 310 K for selected low-energy cation radicals to provide a match with the action spectrum. The stable product of one-electron reduction was identified as having a 7,8-dihydroguanine cation radical moiety, formed by intramolecular hydrogen atom migration from adenine N-1–H. The hydrogen migration was calculated to have a transition state with a low activation energy, E a = 96.5 kJ mol −1 , and positive activation entropy, Δ S ‡ = 75 J mol −1 K −1 . This allowed for a fast isomerization of the primary reduction products on the ion-trap time scale of 150 ms that was substantially accelerated by highly exothermic electron transfer.more » « less
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Abstract A panchromatic triad, consisting of benzothiazole (BTZ) and BF2‐chelated boron‐dipyrromethene (BODIPY) moieties covalently linked to a zinc porphyrin (ZnP) core, has been synthesized and systematically characterized by using1H NMR spectroscopy, ESI‐MS, UV‐visible, steady‐state fluorescence, electrochemical, and femtosecond transient absorption techniques. The absorption band of the triad, BTZ‐BODIPY‐ZnP, and dyads, BTZ‐BODIPY and BODIPY‐ZnP, along with the reference compounds BTZ‐OMe, BODIPY‐OMe, and ZnP‐OMe exhibited characteristic bands corresponding to individual chromophores. Electrochemical measurements on BTZ‐BODIPY‐ZnP exhibited redox behavior similar to that of the reference compounds. Upon selective excitation of BTZ (≈290 nm) in the BTZ‐BODIPY‐ZnP triad, the fluorescence of the BTZ moiety is quenched, due to photoinduced energy transfer (PEnT) from1BTZ*to the BODIPY moiety, followed by quenching of the BODIPY emission due to sequential PEnT from the1BODIPY* moiety to ZnP, resulting in the appearance of the ZnP emission, indicating the occurrence of a two‐step singlet–singlet energy transfer. Further, a supramolecular tetrad, BTZ‐BODIPY‐ZnP:ImC60, was formed by axially coordinating the triad with imidazole‐appended fulleropyrrolidine (ImC60), and parallel steady‐state measurements displayed the diminished emission of ZnP, which clearly indicated the occurrence of photoinduced electron transfer (PET) from1ZnP* to ImC60. Finally, femtosecond transient absorption spectral studies provided evidence for the sequential occurrence of PEnT and PET events, namely,1BTZ*‐BODIPY‐ZnP:ImC60→BTZ‐1BODIPY*‐ZnP:ImC60→BTZ‐BODIPY‐1ZnP*:ImC60→BTZ‐BODIPY‐ZnP.+:ImC60.−in the supramolecular tetrad. The evaluated rate of energy transfer,
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Electron transfer (ET) in donor–bridge–acceptor (DBA) compounds depends strongly on the structural and electronic properties of the bridge. Among the bridges that support donor–acceptor conjugation, alkyne bridges have attractive and unique properties: they are compact, possess linear structure permitting access to high symmetry DBA molecules, and allow torsional motion of D and A, especially for longer bridges. We report conformation dependent electron transfer dynamics in a set of novel DBA compounds featuring butadiyne (C4) bridge, N -isopropyl-1,8-napthalimide (NAP) acceptors, and donors that span a range of reduction potentials (trimethyl silane (Si-C4-NAP), phenyl (Ph-C4-NAP), and dimethyl aniline (D-C4-NAP)). Transient mid-IR absorption spectra of the CC bridge stretching modes, transient spectra in the visible range, and TD-DFT calculations were used to decipher the ET mechanisms. We found that the electronic excited state energies and, especially, the transition dipoles (S 0 → S n ) depend strongly on the dihedral angle ( θ ) between D and A and the frontier orbital symmetry, offering an opportunity to photo-select particular excited states with specific ranges of dihedral angles by exciting at chosen wavelengths. For example, excitation of D-C4-NAP at 400 nm predominantly prepares an S 1 excited state in the planar conformations ( θ ∼ 0) but selects an S 2 state with θ ∼ 90°, indicating the dominant role of the molecular symmetry in the photophysics. Moreover, the symmetry of the frontier orbitals of such DBA compounds not only defines the photo-selection outcome, but also determines the rate of the S 2 → S 1 charge separation reaction. Unprecedented variation of the S 2 –S 1 electronic coupling with θ by over four orders of magnitude results in slow ET at θ ca. 0° and 90° but extremely fast ET at θ of 20–60°. The unique features of high-symmetry alkyne bridged DBA structures enable frequency dependent ET rate selection and make this family of compounds promising targets for the vibrational excitation control of ET kinetics.more » « less