skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Explore Research Products in the PAR
It may take a few hours for recently added research products to appear in PAR search results.


Title: An Efficient Data Retrieval Parallel Reeb Graph Algorithm
The Reeb graph of a scalar function that is defined on a domain gives a topologically meaningful summary of that domain. Reeb graphs have been shown in the past decade to be of great importance in geometric processing, image processing, computer graphics, and computational topology. The demand for analyzing large data sets has increased in the last decade. Hence, the parallelization of topological computations needs to be more fully considered. We propose a parallel augmented Reeb graph algorithm on triangulated meshes with and without a boundary. That is, in addition to our parallel algorithm for computing a Reeb graph, we describe a method for extracting the original manifold data from the Reeb graph structure. We demonstrate the running time of our algorithm on standard datasets. As an application, we show how our algorithm can be utilized in mesh segmentation algorithms.  more » « less
Award ID(s):
1845204
PAR ID:
10250295
Author(s) / Creator(s):
;
Date Published:
Journal Name:
Algorithms
Volume:
13
Issue:
10
ISSN:
1999-4893
Page Range / eLocation ID:
258
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. ; ; ; (, 40th International Symposium on Computational Geometry (SoCG 2024), Leibniz International Proceedings in Informatics (LIPIcs))
    Mulzer, Wolfgang; Phillips, Jeff M (Ed.)
    A Reeb graph is a graphical representation of a scalar function on a topological space that encodes the topology of the level sets. A Reeb space is a generalization of the Reeb graph to a multiparameter function. In this paper, we propose novel constructions of Reeb graphs and Reeb spaces that incorporate the use of a measure. Specifically, we introduce measure-theoretic Reeb graphs and Reeb spaces when the domain or the range is modeled as a metric measure space (i.e., a metric space equipped with a measure). Our main goal is to enhance the robustness of the Reeb graph and Reeb space in representing the topological features of a scalar field while accounting for the distribution of the measure. We first introduce a Reeb graph with local smoothing and prove its stability with respect to the interleaving distance. We then prove the stability of a Reeb graph of a metric measure space with respect to the measure, defined using the distance to a measure or the kernel distance to a measure, respectively. 
    more » « less
  2. ; ; ; ; (, International Conference on Big Data Analytics and Knowledge Discovery (DaWaK))
    null (Ed.)
    Triangle enumeration is a fundamental problem in large-scale graph analysis. For instance, triangles are used to solve practical problems like community detection and spam filtering. On the other hand, there is a large amount of data stored on database management systems (DBMSs), which can be modeled and analyzed as graphs. Alternatively, graph data can be quickly loaded into a DBMS. Our paper shows how to adapt and optimize a randomized distributed triangle enumeration algorithm with SQL queries, which is a significantly different approach from programming graph algorithms in traditional languages such as Python or C++. We choose a parallel columnar DBMS given its fast query processing, but our solution should work for a row DBMS as well. Our randomized solution provides a balanced workload for parallel query processing, being robust to the existence of skewed degree vertices. We experimentally prove our solution ensures a balanced data distribution, and hence workload, among machines. The key idea behind the algorithm is to evenly partition all possible triplets of vertices among machines, sending edges that may form a triangle to a proxy machine; this edge redistribution eliminates shuffling edges during join computation and therefore triangle enumeration becomes local and fully parallel. In summary, our algorithm exhibits linear speedup with large graphs, including graphs that have high skewness in vertex degree distributions. 
    more » « less
  3. ; ; ; ; (, Schloss Dagstuhl – Leibniz-Zentrum für Informatik)
    Mulzer, Wolfgang; Phillips, Jeff M (Ed.)
    Given a map f:X → M from a topological space X to a metric space M, a decorated Reeb space consists of the Reeb space, together with an attribution function whose values recover geometric information lost during the construction of the Reeb space. For example, when M = ℝ is the real line, the Reeb space is the well-known Reeb graph, and the attributions may consist of persistence diagrams summarizing the level set topology of f. In this paper, we introduce decorated Reeb spaces in various flavors and prove that our constructions are Gromov-Hausdorff stable. We also provide results on approximating decorated Reeb spaces from finite samples and leverage these to develop a computational framework for applying these constructions to point cloud data. 
    more » « less
  4. ; ; (, Computing in Geometry and Topology)
    Reeb graphs are widely used in a range of fields for the purposes of analyzing and comparing complex spaces via a simpler combinatorial object. Further, they are closely related to extended persistence diagrams, which largely but not completely encode the information of the Reeb graph. In this paper, we investigate the effect on the persistence diagram of a particular continuous operation on Reeb graphs; namely the (truncated) smoothing operation. This construction arises in the context of the Reeb graph interleaving distance, but separately from that viewpoint provides a simplification of the Reeb graph which continuously shrinks small loops. We then use this characterization to initiate the study of inverse problems for Reeb graphs using smoothing by showing which paths in persistence diagram space (commonly known as vineyards) can be realized by a path in the space of Reeb graphs via these simple operations. This allows us to solve the inverse problem on a certain family of piecewise linear vineyards when fixing an initial Reeb graph. While this particular application is limited in scope, it suggests future directions to more broadly study the inverse problem on Reeb graphs. 
    more » « less
  5. ; ; ; ; (, 33rd ACM Symposium on Parallelism in Algorithms and Architectures (SPAA 2021))
    Over the past decade, there has been increasing interest in distributed/parallel algorithms for processing large-scale graphs. By now, we have quite fast algorithms---usually sublogarithmic-time and often poly(łogłog n)-time, or even faster---for a number of fundamental graph problems in the massively parallel computation (MPC) model. This model is a widely-adopted theoretical abstraction of MapReduce style settings, where a number of machines communicate in an all-to-all manner to process large-scale data. Contributing to this line of work on MPC graph algorithms, we present poly(łog k) ε poly(łogłog n) round MPC algorithms for computing O(k^1+o(1) )-spanners in the strongly sublinear regime of local memory. To the best of our knowledge, these are the first sublogarithmic-time MPC algorithms for spanner construction. As primary applications of our spanners, we get two important implications, as follows: -For the MPC setting, we get an O(łog^2łog n)-round algorithm for O(łog^1+o(1) n) approximation of all pairs shortest paths (APSP) in the near-linear regime of local memory. To the best of our knowledge, this is the first sublogarithmic-time MPC algorithm for distance approximations. -Our result above also extends to the Congested Clique model of distributed computing, with the same round complexity and approximation guarantee. This gives the first sub-logarithmic algorithm for approximating APSP in weighted graphs in the Congested Clique model. 
    more » « less
  • Citation Formats
  • MLA
  • APA
  • Chicago
  • BibTeX
  • Save / Share this Record
  • Send to Email