skip to main content
US FlagAn official website of the United States government
dot gov icon
Official websites use .gov
A .gov website belongs to an official government organization in the United States.
https lock icon
Secure .gov websites use HTTPS
A lock ( lock ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

Attention:

The NSF Public Access Repository (PAR) system and access will be unavailable from 10:00 PM to 12:00 PM ET on Tuesday, March 25 due to maintenance. We apologize for the inconvenience.


Title: Computing water flow through complex landscapes – Part 3: Fill–Spill–Merge: flow routing in depression hierarchies
Abstract. Depressions – inwardly draining regions – are common to many landscapes. When there is sufficient moisture, depressions take the form of lakes and wetlands; otherwise, they may be dry. Hydrological flow models used in geomorphology, hydrology, planetary science, soil and water conservation, and other fields often eliminate depressions through filling or breaching; however, this can produce unrealistic results. Models that retain depressions, on the other hand, are often undesirably expensive to run. In previous work we began to address this by developing a depression hierarchy data structure to capture the full topographic complexity of depressions in a region. Here, we extend this work by presenting the Fill–Spill–Merge algorithm that utilizes our depression hierarchy data structure to rapidly process and distribute runoff. Runoff fills depressions, which then overflow and spill into their neighbors. If both a depression and its neighbor fill, they merge. We provide a detailed explanation of the algorithm and results from two sample study areas. In these case studies, the algorithm runs 90–2600 times faster (with a reduction in compute time of 2000–63 000 times) than the commonly used Jacobi iteration and produces a more accurate output. Complete, well-commented, open-source code with 97 % test coverage is available on GitHub and Zenodo.  more » « less
Award ID(s):
1903606
PAR ID:
10263903
Author(s) / Creator(s):
; ;
Date Published:
Journal Name:
Earth Surface Dynamics
Volume:
9
Issue:
1
ISSN:
2196-632X
Page Range / eLocation ID:
105 to 121
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract. Depressions – inwardly draining regions of digital elevation models – present difficulties for terrain analysis and hydrological modeling. Analogous “depressions” also arise in image processing and morphological segmentation, where they may represent noise, features of interest, or both. Here we provide a new data structure – the depression hierarchy – that captures the full topologic and topographic complexity of depressions in a region. We treat depressions as networks in a way that is analogous to surface-water flow paths, in which individual sub-depressions merge together to form meta-depressions in a process that continues until they begin to drain externally. This hierarchy can be used to selectively fill or breach depressions or to accelerate dynamic models of hydrological flow. Complete, well-commented, open-source code and correctness tests are available on GitHub and Zenodo. 
    more » « less
  2. Abstract. Calculating flow routing across a landscape is a routine process in geomorphology, hydrology, planetary science, and soil and water conservation. Flow-routing calculations often require a preprocessing step to remove depressions from a DEM to create a “flow-routing surface” that can host a continuous, integrated drainage network. However, real landscapes contain natural depressions that trap water. These are an important part of the hydrologic system and should be represented in flow-routing surfaces. Historically, depressions (or “pits”) in DEMs have been viewed as data errors, but the rapid expansion of high-resolution, high-precision DEM coverage increases the likelihood that depressions are real-world features. To address this long-standing problem of emerging significance, we developed FlowFill, an algorithm that routes a prescribed amount of runoff across the surface in order to flood depressions if enough water is available. This mass-conserving approach typically floods smaller depressions and those in wet areas, integrating drainage across them, while permitting internal drainage and disruptions to hydrologic connectivity. We present results from two sample study areas to which we apply a range of uniform initial runoff depths and report the resulting filled and unfilled depressions, the drainage network structure, and the required compute time. For the reach- to watershed-scale examples that we ran, FlowFill compute times ranged from approximately 1 to 30 min, with compute times per cell of 0.0001 to 0.006 s. 
    more » « less
  3. null (Ed.)
    The prevalence of mobile phones and wearable devices enables the passive capturing and modeling of human behavior at an unprecedented resolution and scale. Past research has demonstrated the capability of mobile sensing to model aspects of physical health, mental health, education, and work performance, etc. However, most of the algorithms and models proposed in previous work follow a one-size-fits-all (i.e., population modeling) approach that looks for common behaviors amongst all users, disregarding the fact that individuals can behave very differently, resulting in reduced model performance. Further, black-box models are often used that do not allow for interpretability and human behavior understanding. We present a new method to address the problems of personalized behavior classification and interpretability, and apply it to depression detection among college students. Inspired by the idea of collaborative-filtering, our method is a type of memory-based learning algorithm. It leverages the relevance of mobile-sensed behavior features among individuals to calculate personalized relevance weights, which are used to impute missing data and select features according to a specific modeling goal (e.g., whether the student has depressive symptoms) in different time epochs, i.e., times of the day and days of the week. It then compiles features from epochs using majority voting to obtain the final prediction. We apply our algorithm on a depression detection dataset collected from first-year college students with low data-missing rates and show that our method outperforms the state-of-the-art machine learning model by 5.1% in accuracy and 5.5% in F1 score. We further verify the pipeline-level generalizability of our approach by achieving similar results on a second dataset, with an average improvement of 3.4% across performance metrics. Beyond achieving better classification performance, our novel approach is further able to generate personalized interpretations of the models for each individual. These interpretations are supported by existing depression-related literature and can potentially inspire automated and personalized depression intervention design in the future 
    more » « less
  4. Attribute hierarchy, the underlying prerequisite relationship among attributes, plays an important role in applying cognitive diagnosis models (CDM) for designing efficient cognitive diagnostic assessments. However, there are limited statistical tools to directly estimate attribute hierarchy from response data. In this study, we proposed a Bayesian formulation for attribute hierarchy within CDM framework and developed an efficient Metropolis within Gibbs algorithm to estimate the underlying hierarchy along with the specified CDM parameters. Our proposed estimation method is flexible and can be adapted to a general class of CDMs. We demonstrated our proposed method via a simulation study, and the results from which show that the proposed method can fully recover or estimate at least a subgraph of the underlying structure across various conditions under a specified CDM model. The real data application indicates the potential of learning attribute structure from data using our algorithm and validating the existing attribute hierarchy specified by content experts. 
    more » « less
  5. Abstract Sinkholes are the most abundant surface features in karst areas worldwide. Understanding sinkhole occurrences and characteristics is critical for studying karst aquifers and mitigating sinkhole‐related hazards. Most sinkholes appear on the land surface as depressions or cover collapses and are commonly mapped from elevation data, such as digital elevation models (DEMs). Existing methods for identifying sinkholes from DEMs often require two steps: locating surface depressions and separating sinkholes from non‐sinkhole depressions. In this study, we explored deep learning to directly identify sinkholes from DEM data and aerial imagery. A key contribution of our study is an evaluation of various ways of integrating these two types of raster data. We used an image segmentation model, U‐Net, to locate sinkholes. We trained separate U‐Net models based on four input images of elevation data: a DEM image, a slope image, a DEM gradient image, and a DEM‐shaded relief image. Three normalization techniques (Global, Gaussian, and Instance) were applied to improve the model performance. Model results suggest that deep learning is a viable method to identify sinkholes directly from the images of elevation data. In particular, DEM gradient data provided the best input for U‐net image segmentation models to locate sinkholes. The model using the DEM gradient image with Gaussian normalization achieved the best performance with a sinkhole intersection‐over‐union (IoU) of 45.38% on the unseen test set. Aerial images, however, were not useful in training deep learning models for sinkholes as the models using an aerial image as input achieved sinkhole IoUs below 3%. 
    more » « less