More Like this

1. Diel variability of bulk optical properties associated with the growth and division of small phytoplankton in the North Pacific Subtropical Gyre

   https://doi.org/10.1364/AO.394123  

   Henderikx Freitas, Fernanda ; Dugenne, Mathilde ; Ribalet, François ; Hynes, Annette ; Barone, Benedetto ; Karl, David M. ; White, Angelicque E. ( July 2020 , Applied Optics)

   Cross-platform observing systems are requisite to capturing the temporal and spatial dynamics of particles in the ocean. We present simultaneous observations of bulk optical properties, including the particulate beam attenuation (${\mathit{\text{c}}}_{\mathit{\text{p}}}$) and backscattering ($b_{\text{bp}}$) coefficients, and particle size distributions collected in the North Pacific Subtropical Gyre. Clear and coherent diel cycles are observed in all bulk and size-fractionated optical proxies for particle biomass. We show evidence linking diurnal increases in${\mathit{\text{c}}}_{\mathit{\text{p}}}$and${\mathit{\text{b}}}_{\text{bp}}$to daytime particle growth and division of cells, with particles$<<\#comment/>7\text{µ<\#comment/>}\mathrm{m}$driving the daily cycle of particle production and loss within the mixed layer. Flow cytometry data reveal the nitrogen-fixing cyanobacteriumCrocosphaera($\sim <\#comment/>4-<\#comment/>7\text{µ<\#comment/>}\mathrm{m}$) to be an important driver of${\mathit{\text{c}}}_{\mathit{\text{p}}}$at the time of sampling, whereasProchlorococcusdynamics ($\sim <\#comment/>0.5\text{µ<\#comment/>}\mathrm{m}$) were essential to reproducing temporal variability in${\mathit{\text{b}}}_{\text{bp}}$. This study is a step towards improved characterization of the particle size range represented byin situbulk opticalmore »properties and a better understanding of the mechanisms that drive variability in particle production in the oligotrophic open ocean.

   « less
2. Spectrally simplified approach for leveraging legacy geostationary oceanic observations

   https://doi.org/10.1364/AO.465491  

   Houskeeper, Henry F. ; Hooker, Stanford B. ; Cavanaugh, Kyle C. ( September 2022 , Applied Optics)

   The use of multispectral geostationary satellites to study aquatic ecosystems improves the temporal frequency of observations and mitigates cloud obstruction, but no operational capability presently exists for the coastal and inland waters of the United States. The Advanced Baseline Imager (ABI) on the current iteration of the Geostationary Operational Environmental Satellites, termed the$R$Series (GOES-R), however, provides sub-hourly imagery and the opportunity to overcome this deficit and to leverage a large repository of existing GOES-R aquatic observations. The fulfillment of this opportunity is assessed herein using a spectrally simplified, two-channel aquatic algorithm consistent with ABI wave bands to estimate the diffuse attenuation coefficient for photosynthetically available radiation,$K_d(\mathrm{P}\mathrm{A}\mathrm{R})$. First, anin situABI dataset was synthesized using a globally representative dataset of above- and in-water radiometric data products. Values of$K_d(\mathrm{P}\mathrm{A}\mathrm{R})$were estimated by fitting the ratio of the shortest and longest visible wave bands from thein situABI dataset to coincident,in situ$K_d(\mathrm{P}\mathrm{A}\mathrm{R})$data products. The algorithm was evaluated based on an iterative cross-validation analysis in which 80% of the dataset was randomly partitioned for fitting and the remaining 20%more »was used for validation. The iteration producing the median coefficient of determination ($R^2$) value (0.88) resulted in a root mean square difference of$0.319{\mathrm{m}}^{-<\#comment/>1}$, or 8.5% of the range in the validation dataset. Second, coincident mid-day images of central and southern California from ABI and from the Moderate Resolution Imaging Spectroradiometer (MODIS) were compared using Google Earth Engine (GEE). GEE default ABI reflectance values were adjusted based on a near infrared signal. Matchups between the ABI and MODIS imagery indicated similar spatial variability ($R^2=0.60$) between ABI adjusted blue-to-red reflectance ratio values and MODIS default diffuse attenuation coefficient for spectral downward irradiance at 490 nm,$K_d(490)$, values. This work demonstrates that if an operational capability to provide ABI aquatic data products was realized, the spectral configuration of ABI would potentially support a sub-hourly, visible aquatic data product that is applicable to water-mass tracing and physical oceanography research.

   « less
3. Phase-factor spectra of turbulent phase screens

   https://doi.org/10.1364/JOSAA.429928  

   Muschinski, Andreas ( August 2021 , Journal of the Optical Society of America A)

   The optical phase$\mathrm{\varphi <\#comment/>}$is a key quantity in the physics of light propagating through a turbulent medium. In certain respects, however, the statistics of the phasefactor,$\mathrm{\psi <\#comment/>}=\exp <\#comment/>(i\mathrm{\varphi <\#comment/>})$, are more relevant than the statistics of the phase itself. Here, we present a theoretical analysis of the 2D phase-factor spectrum$F_{\mathrm{\psi <\#comment/>}}(\mathit{\kappa <\#comment/>})$of a random phase screen. We apply the theory to four types of phase screens, each characterized by a power-law phase structure function,$D_{\mathrm{\varphi <\#comment/>}}(r)=(r/r_c{)}^{\mathrm{\gamma <\#comment/>}}$(where$r_c$is the phase coherence length defined by$D_{\mathrm{\varphi <\#comment/>}}(r_c)=1{\mathrm{r}\mathrm{a}\mathrm{d}}^2$), and a probability density function$p_{\mathrm{\alpha <\#comment/>}}(\mathrm{\alpha <\#comment/>})$of the phase increments for a given spatial lag. We analyze phase screens with turbulent ($\mathrm{\gamma <\#comment/>}=5/3$) and quadratic ($\mathrm{\gamma <\#comment/>}=2$) phase structure functions and with normally distributed (i.e., Gaussian) versus Laplacian phase increments. We find that there is a pronounced bump in each of the four phase-factor spectra$F_{\mathrm{\psi <\#comment/>}}(\mathrm{\kappa <\#comment/>})$. The precise location and shape of the bump are different for the four phase-screen types, but in each case it occurs at$\mathrm{\kappa <\#comment/>}\sim <\#comment/>1/r_c$. The bump is unrelated to the well-knownmore »“Hill bump” and is not caused by diffraction effects. It is solely a characteristic of the refractive-index statistics represented by the respective phase screen. We show that the second-order$\mathrm{\psi <\#comment/>}$statistics (covariance function, structure function, and spectrum) characterize a random phase screen more completely than the second-order$\mathrm{\varphi <\#comment/>}$counterparts.

   « less
4. Hybrid electro-optic modulator combining silicon photonic slot waveguides with high-k radio-frequency slotlines

   https://doi.org/10.1364/OPTICA.411161  

   Ummethala, Sandeep ; Kemal, Juned N. ; Alam, Ahmed S. ; Lauermann, Matthias ; Kuzmin, Artem ; Kutuvantavida, Yasar ; Nandam, Sree H. ; Hahn, Lothar ; Elder, Delwin L. ; Dalton, Larry R. ; et al ( April 2021 , Optica)

   Electro-optic (EO) modulators rely on the interaction of optical and electrical signals with second-order nonlinear media. For the optical signal, this interaction can be strongly enhanced using dielectric slot–waveguide structures that exploit a field discontinuity at the interface between a high-index waveguide core and the low-index EO cladding. In contrast to this, the electrical signal is usually applied through conductive regions in the direct vicinity of the optical waveguide. To avoid excessive optical loss, the conductivity of these regions is maintained at a moderate level, thus leading to inherentRClimitations of the modulation bandwidth. In this paper, we show that these limitations can be overcome by extending the slot–waveguide concept to the modulating radio-frequency (RF) signal. Our device combines an RF slotline that relies on$\mathrm{B}\mathrm{a}\mathrm{T}\mathrm{i}{\mathrm{O}}_3$as a high-k dielectric material with a conventional silicon photonic slot waveguide and a highly efficient organic EO cladding material. In a proof-of-concept experiment, we demonstrate a 1 mm long Mach–Zehnder modulator that offers a 3 dB bandwidth of 76 GHz and a 6 dB bandwidth of 110 GHz along with a small$\mathrm{\pi <\#comment/>}$voltage of 1.3 V ($U_{\mathrm{\pi <\#comment/>}}L=1.3\mathrm{V}\mathrm{m}\mathrm{m}$). Wemore »further demonstrate the viability of the device in a data-transmission experiment using four-state pulse-amplitude modulation (PAM4) at line rates up to 200 Gbit/s. Our first-generation devices leave vast room for further improvement and may open an attractive route towards highly efficient silicon photonic modulators that combine sub-1 mm device lengths with sub-1 V drive voltages and modulation bandwidths of more than 100 GHz.

   « less
5. Sparse decomposition light-field microscopy for high speed imaging of neuronal activity

   https://doi.org/10.1364/OPTICA.392805  

   Yoon, Young-Gyu ; Wang, Zeguan ; Pak, Nikita ; Park, Demian ; Dai, Peilun ; Kang, Jeong Seuk ; Suk, Ho-Jun ; Symvoulidis, Panagiotis ; Guner-Ataman, Burcu ; Wang, Kai ; et al ( October 2020 , Optica)

   One of the major challenges in large scale optical imaging of neuronal activity is to simultaneously achieve sufficient temporal and spatial resolution across a large volume. Here, we introduce sparse decomposition light-field microscopy (SDLFM), a computational imaging technique based on light-field microscopy (LFM) that takes algorithmic advantage of the high temporal resolution of LFM and the inherent temporal sparsity of spikes to improve effective spatial resolution and signal-to-noise ratios (SNRs). With increased effective spatial resolution and SNRs, neuronal activity at the single-cell level can be recovered over a large volume. We demonstrate the single-cell imaging capability of SDLFM within vivoimaging of neuronal activity of whole brains of larval zebrafish with estimated lateral and axial resolutions of$\sim <\#comment/>3.5\text{µ<\#comment/>}\mathrm{m}$and$\sim <\#comment/>7.4\text{µ<\#comment/>}\mathrm{m}$, respectively, acquired at volumetric imaging rates up to 50 Hz. We also show that SDLFM increases the quality of neural imaging in adult fruit flies.