skip to main content


Title: Potential for Managed Aquifer Recharge to Enhance Fish Habitat in a Regulated River
Managed aquifer recharge (MAR) is typically used to enhance the agricultural water supply but may also be promising to maintain summer streamflows and temperatures for cold-water fish. An existing aquifer model, water temperature data, and analysis of water administration were used to assess potential benefits of MAR to cold-water fisheries in Idaho’s Snake River. This highly-regulated river supports irrigated agriculture worth US $10 billion and recreational trout fisheries worth $100 million. The assessment focused on the Henry’s Fork Snake River, which receives groundwater from recharge incidental to irrigation and from MAR operations 8 km from the river, addressing (1) the quantity and timing of MAR-produced streamflow response, (2) the mechanism through which MAR increases streamflow, (3) whether groundwater inputs decrease the local stream temperature, and (4) the legal and administrative hurdles to using MAR for cold-water fisheries conservation in Idaho. The model estimated a long-term 4%–7% increase in summertime streamflow from annual MAR similar to that conducted in 2019. Water temperature observations confirmed that recharge increased streamflow via aquifer discharge rather than reduction in river losses to the aquifer. In addition, groundwater seeps created summer thermal refugia. Measured summer stream temperature at seeps was within the optimal temperature range for brown trout, averaging 14.4 °C, whereas ambient stream temperature exceeded 19 °C, the stress threshold for brown trout. Implementing MAR for fisheries conservation is challenged by administrative water rules and regulations. Well-developed and trusted water rights and water-transaction systems in Idaho and other western states enable MAR. However, in Idaho, conservation groups are unable to engage directly in water transactions, hampering MAR for fisheries protection.  more » « less
Award ID(s):
1633756
NSF-PAR ID:
10288439
Author(s) / Creator(s):
; ; ; ;
Date Published:
Journal Name:
Water
Volume:
12
Issue:
3
ISSN:
2073-4441
Page Range / eLocation ID:
673
Format(s):
Medium: X
Sponsoring Org:
National Science Foundation
More Like this
  1. Abstract. Watershed-scale stream temperature models are often one-dimensional because they require fewer data and are more computationally efficient than two- or three-dimensional models. However, one-dimensional models assume completely mixed reaches and ignore small-scale spatial temperature variability, which may create temperature barriers or refugia for cold-water aquatic species. Fine spatial- and temporal-resolution stream temperature monitoring provides information to identify river features with increased thermal variability. We used distributed temperature sensing (DTS) to observe small-scale stream temperature variability, measured as a temperature range through space and time, within two 400 m reaches in summer 2015 in Nevada's East Walker and main stem Walker rivers. Thermal infrared (TIR) aerial imagery collected in summer 2012 quantified the spatial temperature variability throughout the Walker Basin. We coupled both types of high-resolution measured data with simulated stream temperatures to corroborate model results and estimate the spatial distribution of thermal refugia for Lahontan cutthroat trout and other cold-water species. Temperature model estimates were within the DTS-measured temperature ranges 21 % and 70 % of the time for the East Walker River and main stem Walker River, respectively, and within TIR-measured temperatures 17 %, 5 %, and 5 % of the time for the East Walker, West Walker, and main stem Walker rivers, respectively. DTS, TIR, and modeled stream temperatures in the main stem Walker River nearly always exceeded the 21 ∘C optimal temperature threshold for adult trout, usually exceeded the 24 ∘C stress threshold, and could exceed the 28 ∘C lethal threshold for Lahontan cutthroat trout. Measured stream temperature ranges bracketed ambient river temperatures by −10.1 to +2.3 ∘C in agricultural return flows, −1.2 to +4 ∘C at diversions, −5.1 to +2 ∘C in beaver dams, and −4.2 to 0 ∘C at seeps. To better understand the role of these river features on thermal refugia during warm time periods, the respective temperature ranges were added to simulated stream temperatures at each of the identified river features. Based on this analysis, the average distance between thermal refugia in this system was 2.8 km. While simulated stream temperatures are often too warm to support Lahontan cutthroat trout and other cold-water species, thermal refugia may exist to improve habitat connectivity and facilitate trout movement between spawning and summer habitats. Overall, high-resolution DTS and TIR measurements quantify temperature ranges of refugia and augment process-based modeling. 
    more » « less
  2. Abstract

    The Mississippi Embayment aquifer is one of the largest alluvial groundwater aquifers in the United States. It is being excessively used, located along the lower Mississippi River covering approximately 202,019 km2(78,000 square miles). Annual average groundwater depletion in the aquifer has been estimated at 5.18 billion cubic meters (Gm3) (4.2 million acre‐feet) in 1981–2000. However, since 2000, annual groundwater depletion has increased abruptly to 8 Gm3(2001–2008). In recent years, multi‐state efforts have been initiated to improve the Mississippi Embayment aquifer sustainability. One management strategy of interest for preserving groundwater resources is managed aquifer recharge (MAR). In this study, we evaluate the impact of different MAR scenarios on land and water use decisions and the overall groundwater system using an economic model able to assess profitability of crop and land use decisions coupled to the Mississippi Embayment Regional Aquifer Study (MERAS) hydrogeologic model. We run the coupled model for 60 years by considering the hydrologic conditions from the MERAS model for the years 2002–2007 and repeating them 10 times. We find MAR is not economically attractive when the water cost is greater than $0.05/m3. Groundwater storage is unlikely to improve when relying solely on MAR as groundwater management strategy but rather should be implemented jointly with other groundwater conservation policies.

     
    more » « less
  3. Abstract

    Reservoirs are sometimes managed to meet agricultural and other water demands, while also maintaining streamflow for aquatic species and ecosystems. In the Henrys Fork Snake River, Idaho (USA), irrigation‐season management of a headwater reservoir is informed by a flow target in a management reach ~95 km downstream. The target is in place to meet irrigation demand and maintain aquatic habitat within the 11.4 km management reach and has undergone four flow target assignments from 1978 to 2021. Recent changes to irrigation‐season management to maximize reservoir carryover warranted investigation into the flow target assignment. Thus, we created a streamflow‐habitat model using hydraulic measurements, habitat unit mapping, and published habitat suitability criteria for Brown Trout (Salmo trutta), Rainbow Trout (Oncorhynchus mykiss), and Mountain Whitefish (Prosopium williamsoni). We used model output to compare habitat availability across two management regimes (1978–2017 and 2018–2021). We found that efforts to minimize reservoir releases in 2018–2021 did not reduce mean irrigation‐season fish habitat relative to natural flow, but did reduce overall fish habitat variability during the irrigation season compared to streamflow management in 1978–2017. Field observations for this research led to an adjusted flow target in 2020 that moved the target location downstream of intervening irrigation diversions. Using our model output, we demonstrated that moving the location of the target to account for local irrigation diversions will contribute to more consistently suitable fish habitat in the reach. Our study demonstrates the importance of site selection for establishing environmental flow targets.

     
    more » « less
  4. Abstract. Mountainous regions act as the water towers of the worldby producing streamflow and groundwater recharge, a function that isparticularly important in semiarid regions. Quantifying rates of mountainsystem recharge is difficult, and hydrologic models offer a method toestimate recharge over large scales. These recharge estimates are prone touncertainty from various sources including model structure and parameters.The quality of meteorological forcing datasets, particularly in mountainousregions, is a large source of uncertainty that is often neglected ingroundwater investigations. In this contribution, we quantify the impact ofuncertainty in both precipitation and air temperature forcing datasets onthe simulated groundwater recharge in the mountainous watershed of theKaweah River in California, USA. We make use of the integrated surface water–groundwater model, ParFlow.CLM, and several gridded datasets commonly usedin hydrologic studies, downscaled NLDAS-2, PRISM, Daymet, Gridmet, andTopoWx. Simulations indicate that, across all forcing datasets, mountain front recharge is an important component of the water budget in themountainous watershed, accounting for 9 %–72 % of the annual precipitation and ∼90 % of the total mountain system recharge to theadjacent Central Valley aquifer. The uncertainty in gridded air temperatureor precipitation datasets, when assessed individually, results in similarranges of uncertainty in the simulated water budget. Variations in simulatedrecharge to changes in precipitation (elasticities) and air temperature(sensitivities) are larger than 1 % change in recharge per 1 % change inprecipitation or 1 ∘C change in temperature. The total volume ofsnowmelt is the primary factor creating the high water budget sensitivity, and snowmelt volume is influenced by both precipitation and air temperatureforcings. The combined effect of uncertainty in air temperature andprecipitation on recharge is additive and results in uncertainty levels roughly equal to the sum of the individual uncertainties depending on thehydroclimatic condition of the watershed. Mountain system recharge pathwaysincluding mountain block recharge, mountain aquifer recharge, and mountainfront recharge are less sensitive to changes in air temperature than changesin precipitation. Mountain front and mountain block recharge are moresensitive to changes in precipitation than other recharge pathways. Themagnitude of uncertainty in the simulated water budget reflects theimportance of developing high-quality meteorological forcing datasets in mountainous regions. 
    more » « less
  5. Abstract Non-perennial rivers and streams make up over half the global river network and are becoming more widespread. Transitions from perennial to non-perennial flow are a threshold-type change that can lead to alternative stable states in aquatic ecosystems, but it is unknown whether streamflow itself is stable in either wet (flowing) or dry (no-flow) conditions. Here, we investigated drivers and feedbacks associated with regime shifts between wet and dry conditions in an intermittent reach of the Arkansas River (USA) over the past 23 years. Multiple lines of evidence suggested that these regimes represent alternative stable states, including (a) significant jumps in discharge time series that were not accompanied by jumps in flow drivers such as precipitation and groundwater pumping; (b) a multi-modal state distribution with 92% of months experiencing no-flow conditions for <10% or >90% of days, despite unimodal distributions of precipitation and pumping; and (c) a hysteretic relationship between climate and flow state. Groundwater levels appear to be the primary control over the hydrological regime, as groundwater levels in the alluvial aquifer were higher than the stream stage during wet regimes and lower than the streambed during dry regimes. Groundwater level variation, in turn, was driven by processes occurring at both the regional scale (surface water inflows from upstream, groundwater pumping) and the reach scale (stream–aquifer exchange, diffuse recharge through the soil column). Historical regime shifts were associated with diverse pressures including network disconnection caused by upstream water use, increased flow stability potentially associated with reservoir operations, and anomalous wet and dry climate conditions. In sum, stabilizing feedbacks among upstream inflows, stream–aquifer interactions, climate, vegetation, and pumping appear to create alternative wet and dry stable states at this site. These stabilizing feedbacks suggest that widespread observed shifts from perennial to non-perennial flow will be difficult to reverse. 
    more » « less