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1. Lower Bounds Against Sparse Symmetric Functions of ACC Circuits: Expanding the Reach of #SAT Algorithms

   https://doi.org/10.1007/s00224-022-10106-8  

   Vyas, Nikhil ; Williams, R. Ryan ( November 2022 , Theory of Computing Systems)

   We continue the program of proving circuit lower bounds via circuit satisfiability algorithms. So far, this program has yielded several concrete results, proving that functions in$\mathsf {Quasi}\text {-}\mathsf {NP} = \mathsf {NTIME}[n^{(\log n)^{O(1)}}]$$\mathrm{Quasi}-\mathrm{NP}=\mathrm{NTIME}\left[n^{{\left(\log n\right)}^{O\left(1\right)}}\right]$and other complexity classes do not have small circuits (in the worst case and/or on average) from various circuit classes$\mathcal { C}$$C$, by showing that$\mathcal { C}$$C$admits non-trivial satisfiability and/or#SAT algorithms which beat exhaustive search by a minor amount. In this paper, we present a new strong lower bound consequence of having a non-trivial#SAT algorithm for a circuit class${\mathcal C}$$C$. Say that a symmetric Boolean functionf(x₁,…,x_n) issparseif it outputs 1 onO(1) values of${\sum }_{i} x_{i}$${\sum }_i{x}_i$. We show that for every sparsef, and for all “typical”$\mathcal { C}$$C$, faster#SAT algorithms for$\mathcal { C}$$C$circuits imply lower bounds against the circuit class$f \circ \mathcal { C}$$f\circ C$, which may bestrongerthan$\mathcal { C}$$C$itself. In particular:

   #SAT algorithms forn^k-size$\mathcal { C}$$C$-circuits running in 2ⁿ/n^ktime (for allk) implyNEXPdoes not have$(f \circ \mathcal { C})$$(f\circ C)$-circuits of polynomial size.

   #SAT algorithms for$2^{n^{{\varepsilon }}}$$2^{n^{\epsilon }}$-size$\mathcal { C}$$C$-circuits running in$2^{n-n^{{\varepsilon }}}$$2^{n-n^{\epsilon }}$time (for someε> 0) implyQuasi-NPdoes not have$(f \circ \mathcal { C})$$(f\circ C)$-circuits of polynomial size.

   Applying#SAT algorithms from the literature, one immediate corollary of our results is thatQuasi-NPdoes not haveEMAJ∘ACC⁰∘THRcircuits of polynomialmore »size, whereEMAJis the “exact majority” function, improving previous lower bounds againstACC⁰[Williams JACM’14] andACC⁰∘THR[Williams STOC’14], [Murray-Williams STOC’18]. This is the first nontrivial lower bound against such a circuit class.

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2. Green function estimates on complements of low-dimensional uniformly rectifiable sets

   https://doi.org/10.1007/s00208-022-02379-8  

   David, Guy ; Feneuil, Joseph ; Mayboroda, Svitlana ( March 2022 , Mathematische Annalen)

   It has been recently established in David and Mayboroda (Approximation of green functions and domains with uniformly rectifiable boundaries of all dimensions.arXiv:2010.09793) that on uniformly rectifiable sets the Green function is almost affine in the weak sense, and moreover, in some scenarios such Green function estimates are equivalent to the uniform rectifiability of a set. The present paper tackles a strong analogue of these results, starting with the “flagship degenerate operators on sets with lower dimensional boundaries. We consider the elliptic operators$$L_{\beta ,\gamma } =- {\text {div}}D^{d+1+\gamma -n} \nabla $$$L_{\beta ,\gamma }=-\text{div}{D}^{d+1+\gamma -n}\nabla$associated to a domain$$\Omega \subset {\mathbb {R}}^n$$$\Omega \subset R^n$with a uniformly rectifiable boundary$$\Gamma $$$\Gamma$of dimension$$d < n-1$$$d<n-1$, the now usual distance to the boundary$$D = D_\beta $$$D=D_{\beta }$given by$$D_\beta (X)^{-\beta } = \int _{\Gamma } |X-y|^{-d-\beta } d\sigma (y)$$$D_{\beta }{\left(X\right)}^{-\beta }={\int }_{\Gamma }{|X-y|}^{-d-\beta }d\sigma \left(y\right)$for$$X \in \Omega $$$X\in \Omega$, where$$\beta >0$$$\beta >0$and$$\gamma \in (-1,1)$$$\gamma \in (-1,1)$. In this paper we show that the Green functionGfor$$L_{\beta ,\gamma }$$$L_{\beta ,\gamma }$, with pole at infinity, is well approximated by multiples of$$D^{1-\gamma }$$$D^{1-\gamma }$, in the sense that the function$$\big | D\nabla \big (\ln \big ( \frac{G}{D^{1-\gamma }} \big )\big )\big |^2$$$|D\nabla (ln(\frac{G}{D^{1-\gamma }})){|}^2$satisfies a Carleson measure estimate on$$\Omega $$$\Omega$. We underline that the strong and the weak results are different in nature and, of course, at the levelmore »of the proofs: the latter extensively used compactness arguments, while the present paper relies on some intricate integration by parts and the properties of the “magical distance function from David et al. (Duke Math J, to appear).

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3. Finding solutions with distinct variables to systems of linear equations over $$\mathbb {F}_p$$

   https://doi.org/10.1007/s00208-022-02391-y  

   Sauermann, Lisa ( April 2022 , Mathematische Annalen)

   Let us fix a primepand a homogeneous system ofmlinear equations$$a_{j,1}x_1+\dots +a_{j,k}x_k=0$$$a_{j,1}{x}_1+\cdots +a_{j,k}{x}_k=0$for$$j=1,\dots ,m$$$j=1,\cdots ,m$with coefficients$$a_{j,i}\in \mathbb {F}_p$$$a_{j,i}\in F_p$. Suppose that$$k\ge 3m$$$k\ge 3m$, that$$a_{j,1}+\dots +a_{j,k}=0$$$a_{j,1}+\cdots +a_{j,k}=0$for$$j=1,\dots ,m$$$j=1,\cdots ,m$and that every$$m\times m$$$m\times m$minor of the$$m\times k$$$m\times k$matrix$$(a_{j,i})_{j,i}$$${\left(a_{j,i}\right)}_{j,i}$is non-singular. Then we prove that for any (large)n, any subset$$A\subseteq \mathbb {F}_p^n$$$A\subseteq F_p^n$of size$$|A|> C\cdot \Gamma ^n$$$\left|A\right|>C·{\Gamma }^n$contains a solution$$(x_1,\dots ,x_k)\in A^k$$$(x_1,\cdots ,x_k)\in A^k$to the given system of equations such that the vectors$$x_1,\dots ,x_k\in A$$$x_1,\cdots ,x_k\in A$are all distinct. Here,Cand$$\Gamma $$$\Gamma$are constants only depending onp,mandksuch that$$\Gamma $\Gamma <p$. The crucial point here is the condition for the vectors$$x_1,\dots ,x_k$$$x_1,\cdots ,x_k$in the solution$$(x_1,\dots ,x_k)\in A^k$$$(x_1,\cdots ,x_k)\in A^k$to be distinct. If we relax this condition and only demand that$$x_1,\dots ,x_k$$$x_1,\cdots ,x_k$are not all equal, then the statement would follow easily from Tao’s slice rank polynomial method. However, handling the distinctness condition is much harder, and requires a new approach. While all previous combinatorial applications of the slice rank polynomial method have relied on the slice rank of diagonal tensors, we use a slice rank argument for a non-diagonal tensor in combination with combinatorial and probabilistic arguments.
4. Efficient Computation of Sequence Mappability

   https://doi.org/10.1007/s00453-022-00934-y  

   Charalampopoulos, Panagiotis ; Iliopoulos, Costas S. ; Kociumaka, Tomasz ; Pissis, Solon P. ; Radoszewski, Jakub ; Straszyński, Juliusz ( February 2022 , Algorithmica)

   Sequence mappability is an important task in genome resequencing. In the (k, m)-mappability problem, for a given sequenceTof lengthn, the goal is to compute a table whoseith entry is the number of indices$$j \ne i$$$j\ne i$such that the length-msubstrings ofTstarting at positionsiandjhave at mostkmismatches. Previous works on this problem focused on heuristics computing a rough approximation of the result or on the case of$$k=1$$$k=1$. We present several efficient algorithms for the general case of the problem. Our main result is an algorithm that, for$$k=O(1)$$$k=O\left(1\right)$, works in$$O(n)$$$O\left(n\right)$space and, with high probability, in$$O(n \cdot \min \{m^k,\log ^k n\})$$$O(n·min\{m^k,{log}^{k}n\})$time. Our algorithm requires a careful adaptation of thek-errata trees of Cole et al. [STOC 2004] to avoid multiple counting of pairs of substrings. Our technique can also be applied to solve the all-pairs Hamming distance problem introduced by Crochemore et al. [WABI 2017]. We further develop$$O(n^2)$$$O\left(n^2\right)$-time algorithms to computeall(k, m)-mappability tables for a fixedmand all$$k\in \{0,\ldots ,m\}$$$k\in \{0,\dots ,m\}$or a fixedkand all$$m\in \{k,\ldots ,n\}$$$m\in \{k,\dots ,n\}$. Finally, we show that, for$$k,m = \Theta (\log n)$$$k,m=\Theta (logn)$, the (k, m)-mappability problem cannot be solved in strongly subquadratic time unless the Strong Exponential Time Hypothesis fails. This is an improved and extended version of a paper presented at SPIRE 2018.
5. KODIAQ-Z: Metals and Baryons in the Cool Intergalactic and Circumgalactic Gas at 2.2 ≲ z ≲ 3.6

   https://doi.org/10.3847/1538-4357/ac7400  

   Lehner, Nicolas ; Kopenhafer, Claire ; O’Meara, John M. ; Howk, J. Christopher ; Fumagalli, Michele ; Prochaska, J. Xavier ; Acharyya, Ayan ; O’Shea, Brian W. ; Peeples, Molly S. ; Tumlinson, Jason ; et al ( September 2022 , The Astrophysical Journal)

   We present the KODIAQ-Z survey aimed to characterize the cool, photoionized gas at 2.2 ≲z≲ 3.6 in 202 Hi-selected absorbers with 14.6 ≤$\log N_{\mathrm{H}\mathrm{I}}$< 20 that probe the interface between galaxies and the intergalactic medium (IGM). We find that gas with$14.6\le \log N_{\mathrm{H}\mathrm{I}}<20$at 2.2 ≲z≲ 3.6 can be metal-rich (−1.6 ≲ [X/H] ≲ − 0.2) as seen in damped Lyαabsorbers (DLAs); it can also be very metal-poor ([X/H] < − 2.4) or even pristine ([X/H] < − 3.8), which is not observed in DLAs but is common in the IGM. For$16<\log N_{\mathrm{H}\mathrm{I}}<20$absorbers, the frequency of pristine absorbers is about 1%–10%, while for$14.6\le \log N_{\mathrm{H}\mathrm{I}}\le 16$absorbers it is 10%–20%, similar to the diffuse IGM. Supersolar gas is extremely rare (<1%) at these redshifts. The factor of several thousand spread from the lowest to highest metallicities and large metallicity variations (a factor of a few to >100) between absorbers separated by less than Δv< 500 km s⁻¹imply that the metals are poorly mixed in$14.6\le \log N_{\mathrm{H}\mathrm{I}}<20$gas. We show that these photoionized absorbers contribute to aboutmore »14% of the cosmic baryons and 45% of the cosmic metals at 2.2 ≲z≲ 3.6. We find that the mean metallicity increases withN_Hi, consistent with what is found inz< 1 gas. The metallicity of gas in this column density regime has increased by a factor ∼8 from 2.2 ≲z≲ 3.6 toz< 1, but the contribution of the$14.6\le \log N_{\mathrm{H}\mathrm{I}}<19$absorbers to the total metal budget of the universe atz< 1 is a quarter of that at 2.2 ≲z≲ 3.6. We show that FOGGIE cosmological zoom-in simulations have a similar evolution of [X/H] withN_Hi, which is not observed in lower-resolution simulations. In these simulations, very metal-poor absorbers with [X/H] < − 2.4 atz∼ 2–3 are tracers of inflows, while higher-metallicity absorbers are a mixture of inflows and outflows.

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