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1. Intraspecific variation and energy channel coupling within a Chilean kelp forest

   https://doi.org/10.1002/ecy.3198  

   Elliott Smith, E; Harrod, C; Docmac, F; Newsome, S. (October 2020, Ecology)

   Winemiller, KO. (Ed.)

   The widespread importance of variable types of primary production, or energy channels, to consumer communities has become increasingly apparent. However, the mechanisms underlying this “multichannel” feeding remain poorly understood, especially for aquatic ecosystems that pose unique logistical constraints given the diversity of potential energy channels. Here, we use bulk tissue isotopic analysis along with carbon isotope (δ13C) analysis of individual amino acids to characterize the relative contribution of pelagic and benthic energy sources to a kelp forest consumer community in northern Chile. We measured bulk tissue δ13C and δ15N for >120 samples; of these we analyzed δ13C values of six essential amino acids (EAA) from nine primary producer groups (n = 41) and 11 representative nearshore consumer taxa (n = 56). Using EAA δ13C data, we employed linear discriminant analysis (LDA) to assess how distinct EAA δ13C values were between local pelagic (phytoplankton/particulate organic matter), and benthic (kelps, red algae, and green algae) endmembers. With this model, we were able to correctly classify nearly 90% of producer samples to their original groupings, a significant improvement on traditional bulk isotopic analysis. With this EAA isotopic library, we then generated probability distributions for the most important sources of production for each individual consumer and species using a bootstrap‐resampling LDA approach. We found evidence for multichannel feeding within the community at the species level. Invertebrates tended to focus on either pelagic or benthic energy, deriving 13–67% of their EAA from pelagic sources. In contrast, mobile (fish) taxa at higher trophic levels used more equal proportions of each channel, ranging from 19% to 47% pelagically derived energy. Within a taxon, multichannel feeding was a result of specialization among individuals in energy channel usage, with 37 of 56 individual consumers estimated to derive >80% of their EAA from a single channel. Our study reveals how a cutting‐edge isotopic technique can characterize the dynamics of energy flow in coastal food webs, a topic that has historically been difficult to address. More broadly, our work provides a mechanism as to how multichannel feeding may occur in nearshore communities, and we suggest this pattern be investigated in additional ecosystems. 

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2. The coupling of green and brown food webs regulates trophic position in a montane mammal guild

   https://doi.org/10.1002/ecy.3949  

   Manlick, Philip J.; Cook, Joseph A.; Newsome, Seth D. (February 2023, Ecology)

   Abstract Food web ecology has revolutionized our understanding of ecological processes, but the drivers of food web properties like trophic position (TP) and food chain length are notoriously enigmatic. In terrestrial ecosystems, above‐ and belowground systems were historically compartmentalized into “green” and “brown” food webs, but the coupling of these systems by animal consumers is increasingly recognized, with potential consequences for trophic structure. We used stable isotope analysis (δ 13 C, δ 15 N) of individual amino acids to trace the flow of essential biomolecules and jointly measure multichannel feeding, food web coupling, and TP in a guild of small mammals. We then tested the hypothesis that brown energy fluxes to aboveground consumers increase terrestrial food chain length via cryptic trophic transfers during microbial decomposition. We found that the average small mammal consumer acquired nearly 70% of their essential amino acids (69.0% ± 7.6%) from brown food webs, leading to significant increases in TP across species and functional groups. Fungi were the primary conduit of brown energy to aboveground consumers, providing nearly half the amino acid budget for small mammals on average (44.3% ± 12.0%). These findings illustrate the tightly coupled nature of green and brown food webs and show that microbially mediated energy flow ultimately regulates food web structure in aboveground consumers. Consequently, we propose that the integration of green and brown energy channels is a cryptic driver of food chain length in terrestrial ecosystems. 

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3. Using stable isotopes to describe the trophic structure of gelatinous zooplankton across the deep pelagic

   https://doi.org/10.1002/lno.70237  

   Chavarry, Julia M; Hetherington, Elizabeth D; Close, Hilary G; Choy, C Anela (December 2025, Limnology and Oceanography)

   Abstract Although gelatinous zooplankton are key members of marine ecosystems and food webs, their trophic ecology is poorly described across the deep pelagic. We used stable carbon (bulk tissue) and nitrogen (bulk tissue and amino acid) isotope analysis to estimate the trophic positions (TPs) of abundant gelatinous zooplankton (chaetognaths, cnidarians, ctenophores, mollusks, pelagic tunicates) across depth habitats. We collected gelatinous zooplankton from a range of feeding guilds, sampling animals from 0 to 3000 m on four cruises across the years 2020 to 2023 within the southern California Current Ecosystem. Within taxonomic groups, bulk carbon (δ¹³C) and nitrogen isotope (δ¹⁵N) values were similar, regardless of animal size. Gelatinous zooplankton spanned 2.4 trophic levels. Trophic positions were highest for animals that consume other gelatinous zooplankton (e.g.,Aeginaspp., TP = 3.8) and lowest for grazers (e.g.,Pyrosoma atlanticum, TP = 1.9). Trophic positions based on δ¹⁵N values of amino acids often agreed with diets reported from the literature, where available, while TPs calculated using bulk tissue δ¹⁵N values were often lower. Animal δ¹⁵N (bulk and source amino acid) values increased with increasing depth, suggesting that shallow and deep‐pelagic taxa rely on distinct basal food resources. Medusae residing from 600 to 1000 m had less variable bulk tissue δ¹³C and δ¹⁵N values across locations and seasons than ctenophores, medusae, and pelagic tunicates collected from 0 to 600 m, suggesting that deep‐pelagic taxa rely on stable food resources at depth. Animal δ¹⁵N and δ¹³C values were relatively consistent between seasons, potentially suggesting stability in the trophic structure of the jelly web. 

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4. Sea otter effects on trophic structure of seagrass communities in southeast Alaska

   https://doi.org/10.3354/meps13819  

   Raymond, WW; Schram, JB; Eckert, GL; Galloway, AWE (September 2021, Marine Ecology Progress Series)

   Previous research in southeast Alaska on the effects of sea otters Enhydra lutris in seagrass Zostera marina communities identified many but not all of the trophic relationships that were predicted by a sea otter-mediated trophic cascade. To further resolve these trophic connections, we compared biomass, carbon (δ 13 C) and nitrogen (δ 15 N) stable isotope (SI), and fatty acid (FA) data from 16 taxa at 3 sites with high and 3 sites with low sea otter density (8.2 and 0.1 sea otters km -2 , respectively). We found lower crab and clam biomass in the high sea otter region but did not detect a difference in biomass of other seagrass community taxa or the overall community isotopic niche space between sea otter regions. Only staghorn sculpin differed in δ 13 C between regions, and Fucus , sugar kelp, butter clams, dock shrimp, and shiner perch differed in δ 15 N. FA analysis indicated multivariate dissimilarity in 11 of the 15 conspecifics between sea otter regions. FA analysis found essential FAs, which consumers must obtain from their diet, including 20:5ω3 (EPA) and 22:6ω3 (DHA), were common in discriminating conspecifics between sea otter regions, suggesting differences in consumer diets. Further FA analysis indicated that many consumers rely on diverse diets, regardless of sea otter region, potentially buffering these consumers from sea otter-mediated changes to diet availability. While sea otters are major consumers in this system, further studies are needed to understand the mechanisms responsible for the differences in biomarkers between regions with and without sea otters. 

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5. Advancing the Sea Ice Hypothesis: Trophic Interactions Among Breeding Pygoscelis Penguins With Divergent Population Trends Throughout the Western Antarctic Peninsula

   https://doi.org/10.3389/fmars.2021.526092  

   Gorman, Kristen B.; Ruck, Kate E.; Williams, Tony D.; Fraser, William R. (September 2021, Frontiers in Marine Science)

   We evaluated annual and regional variation in the dietary niche of Pygoscelis penguins including the sea ice-obligate Adélie penguin ( Pygoscelis adeliae ), and sea ice-intolerant chinstrap ( Pygoscelis antarcticus ) and gentoo ( Pygoscelis papua ) penguins, three species that nest throughout the western Antarctic Peninsula (AP) to test the sea ice trophic interaction hypothesis , which posits that penguin breeding populations with divergent trends, i.e., declining or increasing, are reliant on differing food webs. Our study relies on values of naturally occurring carbon ( 13 C/ 12 C, δ 13 C) and nitrogen ( 15 N/ 14 N, δ 15 N) stable isotopes as integrated proxies of penguin food webs measured over three years at three different breeding colonies. At Anvers Island in the north, where reductions in sea ice and changes in breeding population trends among sympatric sea ice-obligate (Adélie) and sea ice-intolerant (chinstrap and gentoo) penguins have been most notable, our analyses show that all three species of Pygoscelis penguins became more similar isotopically over the reproductive period. By late chick-rearing at Anvers Island, crèched chicks at 5-weeks-old for all species occupied similar trophic positions. Isotopic mixing models indicated that the proportions of prey provisioned by adult penguins to 5-week-old chicks at Anvers Island were generally similar across species within years, consisting primarily of Antarctic krill ( Euphausia superba ). Crèched Adélie chicks had higher δ 13 C and δ 15 N values at Avian and Charcot Islands, southern breeding colonies where sea ice is more prominent and populations of Adélie penguins have increased or remain stable. Trophic position increased with latitude, while the proportions of prey provisioned by Adélie penguin adults to chicks at southern breeding colonies included species typical of high Antarctic marine food webs, especially crystal krill ( Euphausia crystallorophias ). A Bayesian metric for dietary niche width, standard ellipse area (SEA-B), indicated that Pygoscelis penguins with greater population changes in the north had more variability in dietary niche width than stable populations further south. Our results lend insight on marine food web drivers of Pygoscelis penguin reproduction at the regional scale and question the long-standing paradigm that Antarctic krill are the only food web component critical to penguin reproductive survival in this region of the Southern Ocean. 

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