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The conformational ensemble and function of intrinsically disordered proteins (IDPs) are sensitive to their solution environment. The inherent malleability of disordered proteins combined with the exposure of their residues accounts for this sensitivity. One context in which IDPs play important roles that is concomitant with massive changes to the intracellular environment is during desiccation (extreme drying). The ability of organisms to survive desiccation has long been linked to the accumulation of high levels of cosolutes such as trehalose or sucrose as well as the enrichment of IDPs, such as late embryogenesis abundant (LEA) proteins or cytoplasmic abundant heat soluble (CAHS) proteins. Despite knowing that IDPs play important roles and are co-enriched alongside endogenous, species-specific cosolutes during desiccation, little is known mechanistically about how IDP-cosolute interactions influence desiccation tolerance. Here, we test the notion that the protective function of desiccation-related IDPs is enhanced through conformational changes induced by endogenous cosolutes. We find that desiccation-related IDPs derived from four different organisms spanning two LEA protein families and the CAHS protein family, synergize best with endogenous cosolutes during drying to promote desiccation protection. Yet the structural parameters of protective IDPs do not correlate with synergy for either CAHS or LEA proteins. We further demonstrate that for CAHS, but not LEA proteins, synergy is related to self-assembly and the formation of a gel. Our results demonstrate that functional synergy between IDPs and endogenous cosolutes is a convergent desiccation protection strategy seen among different IDP families and organisms, yet, the mechanisms underlying this synergy differ between IDP families.
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The effect of sucrose polymer-size on glass transition temperature, glass former fragility, and water retention during drying
Water is essential for all active life processes. Despite this, there are a number of organisms that can survive prolonged desiccation. The vitrification hypothesis posits that such organisms survive desiccation by forming non-crystalline amorphous (vitrified) solids, often through the accumulation of protective disaccharides. In line with this theory, vitrification has been shown to be essential for desiccation tolerance in many organisms that survive extreme drying. However, it is known that not all vitrified materials are protective and that certain physio-chemical properties correlate with the protection in the glassy state. Furthermore, recent evidence suggests that the physio-chemical properties that correlate with protection can vary depending on the chemical nature of similarly sized protectants. While the chemistry of protectants has been probed in relation to the protective properties they induce when vitrified, the effect of protectant size on glassy properties and protection during drying has not been investigated. Here, we study the effect of the polymer size of sucrose on glassy properties associated with protection in the vitrified state. The monomer sucrose, and the polymers polysucrose 70 and polysucrose 400 (70 and 400 refer to the molecular weight of the polymers in kDa). Using these three different-sized sucrose polymers, we find that each of the glassy properties we investigated including; enzyme protection, water content, glass transition temperature, and glass former fragility, were affected by polymer size. However, only one vitrified property, glass transition temperature, correlated with protection during drying. This correlation is heavily dependent on sucrose polymer size. Increased glass transition midpoint temperature correlated positively with protection conferred by monomeric sucrose (p-value = 0.009,R2= 0.840), whereas this correlation was bi-phasic for polysucrose 70, and had an inverse relationship for polysucrose 400 (p-value = 0.120, R2 = 0.490). Our results indicate that the size of vitrifying protectants can have a profound effect on glassy properties as well as on how these properties correlate with protection in the dry state. Beyond desiccation tolerance, these findings provide insights for the development of new technologies for the stabilization of biological material in the dry state.
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- PAR ID:
- 10503344
- Publisher / Repository:
- Frontiers in Materials
- Date Published:
- Journal Name:
- Frontiers in Materials
- Volume:
- 11
- ISSN:
- 2296-8016
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
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The conformational ensemble and function of intrinsically disordered proteins (IDPs) are sensitive to their solution environment. The inherent malleability of disordered proteins, combined with the exposure of their residues, accounts for this sensitivity. One context in which IDPs play important roles that are concomitant with massive changes to the intracellular environment is during desiccation (extreme drying). The ability of organisms to survive desiccation has long been linked to the accumulation of high levels of cosolutes such as trehalose or sucrose as well as the enrichment of IDPs, such as late embryogenesis abundant (LEA) proteins or cytoplasmic abundant heat-soluble (CAHS) proteins. Despite knowing that IDPs play important roles and are co-enriched alongside endogenous, species-specific cosolutes during desiccation, little is known mechanistically about how IDP-cosolute interactions influence desiccation tolerance. Here, we test the notion that the protective function of desiccation-related IDPs is enhanced through conformational changes induced by endogenous cosolutes. We find that desiccation-related IDPs derived from four different organisms spanning two LEA protein families and the CAHS protein family synergize best with endogenous cosolutes during drying to promote desiccation protection. Yet the structural parameters of protective IDPs do not correlate with synergy for either CAHS or LEA proteins. We further demonstrate that for CAHS, but not LEA proteins, synergy is related to self-assembly and the formation of a gel. Our results suggest that functional synergy between IDPs and endogenous cosolutes is a convergent desiccation protection strategy seen among different IDP families and organisms, yet the mechanisms underlying this synergy differ between IDP families.more » « less
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Abstract Tardigrades are microscopic animals renowned for their ability to survive extreme desiccation. Unlike many desiccation-tolerant organisms that accumulate high levels of the disaccharide trehalose to protect themselves during drying, tardigrades accumulate little or undetectable levels. Using comparative metabolomics, we find that despite being enriched at low levels, trehalose is a key biomarker distinguishing hydration states of tardigrades. In vitro, naturally occurring stoichiometries of trehalose and CAHS proteins, intrinsically disordered proteins with known protective capabilities, were found to produce synergistic protective effects during desiccation. In vivo, this synergistic interaction is required for robust CAHS-mediated protection. This demonstrates that trehalose acts not only as a protectant, but also as a synergistic cosolute. Beyond desiccation tolerance, our study provides insights into how the solution environment tunes intrinsically disordered proteins’ functions, many of which are vital in biological contexts such as development and disease that are concomitant with large changes in intracellular chemistry.more » « less
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- Free Publicly Accessible Full Text
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Accepted Manuscript1.0
- Journal Article:
- https://doi.org/10.3389/fmats.2024.1351671
