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1. Episodic organic carbon fluxes from surface ocean to abyssal depths during long-term monitoring in NE Pacific

   https://doi.org/10.1073/pnas.1814559115  

   Smith, Kenneth L.; Ruhl, Henry A.; Huffard, Christine L.; Messié, Monique; Kahru, Mati (November 2018, Proceedings of the National Academy of Sciences)

   Growing evidence suggests substantial quantities of particulate organic carbon (POC) produced in surface waters reach abyssal depths within days during episodic flux events. A 29-year record of in situ observations was used to examine episodic peaks in POC fluxes and sediment community oxygen consumption (SCOC) at Station M (NE Pacific, 4,000-m depth). From 1989 to 2017, 19% of POC flux at 3,400 m arrived during high-magnitude episodic events (≥mean + 2 σ), and 43% from 2011 to 2017. From 2011 to 2017, when high-resolution SCOC data were available, time lags between changes in satellite-estimated export flux (EF), POC flux, and SCOC on the sea floor varied between six flux events from 0 to 70 days, suggesting variable remineralization rates and/or particle sinking speeds. Half of POC flux pulse events correlated with prior increases in EF and/or subsequent SCOC increases. Peaks in EF overlying Station M frequently translated to changes in POC flux at abyssal depths. A power-law model (Martin curve) was used to estimate abyssal fluxes from EF and midwater temperature variation. While the background POC flux at 3,400-m depth was described well by the model, the episodic events were significantly underestimated by ∼80% and total flux by almost 50%. Quantifying episodic pulses of organic carbon into the deep sea is critical in modeling the depth and intensity of POC sequestration and understanding the global carbon cycle. 

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2. Biological composition and microbial dynamics of sinking particulate organic matter at abyssal depths in the oligotrophic open ocean

   https://doi.org/10.1073/pnas.1903080116  

   Boeuf, Dominique; Edwards, Bethanie R.; Eppley, John M.; Hu, Sarah K.; Poff, Kirsten E.; Romano, Anna E.; Caron, David A.; Karl, David M.; DeLong, Edward F. (January 2019, Proceedings of the National Academy of Sciences)

   Sinking particles are a critical conduit for the export of organic material from surface waters to the deep ocean. Despite their importance in oceanic carbon cycling and export, little is known about the biotic composition, origins, and variability of sinking particles reaching abyssal depths. Here, we analyzed particle-associated nucleic acids captured and preserved in sediment traps at 4,000-m depth in the North Pacific Subtropical Gyre. Over the 9-month time-series, Bacteria dominated both the rRNA-gene and rRNA pools, followed by eukaryotes (protists and animals) and trace amounts of Archaea. Deep-sea piezophile-like Gammaproteobacteria, along with Epsilonproteobacteria, comprised >80% of the bacterial inventory. Protists (mostly Rhizaria, Syndinales, and ciliates) and metazoa (predominantly pelagic mollusks and cnidarians) were the most common sinking particle-associated eukaryotes. Some near-surface water-derived eukaryotes, especially Foraminifera, Radiolaria, and pteropods, varied greatly in their abundance patterns, presumably due to sporadic export events. The dominance of piezophile-like Gammaproteobacteria and Epsilonproteobacteria, along with the prevalence of their nitrogen cycling-associated gene transcripts, suggested a central role for these bacteria in the mineralization and biogeochemical transformation of sinking particulate organic matter in the deep ocean. Our data also reflected several different modes of particle export dynamics, including summer export, more stochastic inputs from the upper water column by protists and pteropods, and contributions from sinking mid- and deep-water organisms. In total, our observations revealed the variable and heterogeneous biological origins and microbial activities of sinking particles that connect their downward transport, transformation, and degradation to deep-sea biogeochemical processes. 

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3. Annual Net Community Production of Particulate and Dissolved Organic Carbon From a Decade of Biogeochemical Profiling Float Observations in the Northeast Pacific

   https://doi.org/10.1029/2020GB006599  

   Haskell, II, W. Z.; Fassbender, A. J.; Long, J. S.; Plant, J. N. (October 2020, Global Biogeochemical Cycles)

   Abstract Carbon export out of the surface ocean via the biological pump is a critical sink for atmospheric carbon dioxide. This process transports organic carbon to the deep ocean through sinking particulate organic carbon (POC) and the downward transport of suspended POC and dissolved organic carbon (DOC). Changes in the relative contribution of each pathway can significantly affect the magnitude and efficiency of carbon export to depth. Net community production (NCP), an analog of carbon export under steady state assumptions, is typically estimated using budgets of biologically important chemical tracers in the upper ocean constrained by ship‐board or autonomous platform observations. In this study, we use measurements from biogeochemical profiling floats, the Ocean Station Papa mooring, and recently developed algorithms for carbonate system parameters to constrain budgets for three tracers (nitrate, dissolved inorganic carbon, and total alkalinity) and estimate NCP in the Northeast Pacific from 2009 to 2017. Using our multiple‐tracer approach, and constraining end‐member nutrient ratios of the POC and DOC produced, we not only calculate regional NCP throughout the annual cycle and across multiple depth horizons, but also partition this quantity into particulate and dissolved portions. We also use a particle backscatter‐based approach to estimate POC attenuation with depth and present a new method to constrain particle export across deeper horizons and estimate in situ export efficiency. Our results agree well with previously published estimates of regional carbon export annually and suggest that the approaches presented here could be used to assess the magnitude and efficiency of carbon export in other regions of the world's oceans. 

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4. Microbial dynamics of elevated carbon flux in the open ocean’s abyss

   https://doi.org/10.1073/PNAS.2018269118  

   Poff, Kirsten E.; Leu, Andy O.; Eppley, John M.; Karl, David M.; DeLong, Edward F. (January 2021, Proceedings of the National Academy of Sciences)

   null (Ed.)

   In the open ocean, elevated carbon flux (ECF) events increase the delivery of particulate carbon from surface waters to the seafloor by severalfold compared to other times of year. Since microbes play central roles in primary production and sinking particle formation, they contribute greatly to carbon export to the deep sea. Few studies, however, have quantitatively linked ECF events with the specific microbial assemblages that drive them. Here, we identify key microbial taxa and functional traits on deep-sea sinking particles that correlate positively with ECF events. Microbes enriched on sinking particles in summer ECF events included symbiotic and free-living diazotrophic cyanobacteria, rhizosolenid diatoms, phototrophic and heterotrophic protists, and photoheterotrophic and copiotrophic bacteria. Particle-attached bacteria reaching the abyss during summer ECF events encoded metabolic pathways reflecting their surface water origins, including oxygenic and aerobic anoxygenic photosynthesis, nitrogen fixation, and proteorhodopsin-based photoheterotrophy. The abundances of some deep-sea bacteria also correlated positively with summer ECF events, suggesting rapid bathypelagic responses to elevated organic matter inputs. Biota enriched on sinking particles during a spring ECF event were distinct from those found in summer, and included rhizaria, copepods, fungi, and different bacterial taxa. At other times over our 3-y study, mid- and deep-water particle colonization, predation, degradation, and repackaging (by deep-sea bacteria, protists, and animals) appeared to shape the biotic composition of particles reaching the abyss. Our analyses reveal key microbial players and biological processes involved in particle formation, rapid export, and consumption, that may influence the ocean’s biological pump and help sustain deep-sea ecosystems. 

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5. Particle cycling rates at Station P as estimated from the inversion of POC concentration data

   https://doi.org/10.1525/elementa.2021.00018  

   Amaral, Vinícius J.; Lam, Phoebe J.; Marchal, Olivier; Roca-Martí, Montserrat; Fox, James; Nelson, Norman B. (January 2022, Elementa: Science of the Anthropocene)

   Particle cycling rates in marine systems are difficult to measure directly, but of great interest in understanding how carbon and other elements are distributed throughout the ocean. Here, rates of particle production, aggregation, disaggregation, sinking, remineralization, and transport mediated by zooplankton diel vertical migration were estimated from size-fractionated measurements of particulate organic carbon (POC) concentration collected during the NASA EXport Processes in the Ocean from RemoTe Sensing (EXPORTS) cruise at Station P in summer 2018. POC data were combined with a particle cycling model using an inverse method. Our estimates of the total POC settling flux throughout the water column are consistent with those derived from thorium-234 disequilibrium and sediment traps. A budget for POC in two size fractions, small (1–51 µm) and large (> 51 µm), was produced for both the euphotic zone (0–100 m) and the upper mesopelagic zone (100–500 m). We estimated that POC export at the base of the euphotic zone was 2.2 ± 0.8 mmol m−2 d−1, and that both small and large particles contributed considerably to the total export flux along the water column. The model results indicated that throughout the upper 500 m, remineralization leads to a larger loss of small POC than does aggregation, whereas disaggregation results in a larger loss of large POC than does remineralization. Of the processes explicitly represented in the model, zooplankton diel vertical migration is a larger source of large POC to the upper mesopelagic zone than the convergence of large POC due to particle sinking. Positive model residuals reveal an even larger unidentified source of large POC in the upper mesopelagic zone. Overall, our posterior estimates of particle cycling rate constants do not deviate much from values reported in the literature, i.e., size-fractionated POC concentration data collected at Station P are largely consistent with prior estimates given their uncertainties. Our budget estimates should provide a useful framework for the interpretation of process-specific observations obtained by various research groups in EXPORTS. Applying our inverse method to other systems could provide insight into how different biogeochemical processes affect the cycling of POC in the upper water column. 

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