Abstract Streambed biogeochemical processes strongly influence riverine water quality and gaseous emissions. These processes depend largely on flow paths through the hyporheic zone (HZ), the streambed volume saturated with stream water. Boulders and other macroroughness elements are known to induce hyporheic flows in gravel‐bed streams. However, data quantifying the impact of these elements on hyporheic chemistry are lacking. We demonstrate that, in gravel‐bed rivers, the amount of dissolved oxygen (DO) in the bed depends chiefly on changes in bed shape, or morphology, such as the formation of scour and depositional areas, caused by the boulders, among other factors. The study was conducted by comparing DO distributions across different bed states and hydraulic conditions. Our experimental facility replicates conditions observed in natural gravel‐bed streams. We instrumented a section in the bed with DO sensors. Results generally indicate that boulder placement on planar beds has some effects, which are significant at high base flows, on increasing hyporheic oxygen amount compared to the planar case without boulders. Conversely, boulder‐induced morphological changes noticeably and significantly increase the amount of oxygen in the HZ, with the increase depending on sediment inputs during flood flows able to mobilize the sediment. Therefore, streambeds of natural, plane‐bed streams may have deeper oxic zones than previously thought because the presence of boulders and the occurrence of flood flows with varying sediment inputs induce streambed variations among these elements.
more »
« less
Toward a Universal Model of Hyporheic Exchange and Nutrient Cycling in Streams
Abstract In this paper we demonstrate that several ubiquitous hyporheic exchange mechanisms can be represented simply as a one‐dimensional diffusion process, where the diffusivity decays exponentially with depth into the streambed. Based on a meta‐analysis of 106 previously published laboratory measurements of hyporheic exchange (capturing a range of bed morphologies, hydraulic conditions, streambed properties, and experimental approaches) we find that the reference diffusivity and mixing length‐scale are functions of the permeability Reynolds Number and Schmidt Number. These dimensionless numbers, in turn, can be estimated for a particular stream from the median grain size of the streambed and the stream's depth, slope, and temperature. Application of these results to a seminal study of nitrate removal in 72 headwater streams across the United States, reveals: (a) streams draining urban and agricultural landscapes have a diminished capacity for in‐stream and in‐bed mixing along with smaller subsurface storage zones compared to streams draining reference landscapes; (b) under steady‐state conditions nitrate uptake in the streambed is primarily biologically controlled; and (c) median reaction timescales for nitrate removal in the hyporheic zone are 0.5 and 20 hr for uptake by assimilation and denitrification, respectively. While further research is needed, the simplicity and extensibility of the framework described here should facilitate cross‐disciplinary discussions and inform reach‐scale studies of pollutant fate and transport and their scale‐up to watersheds and beyond.
more »
« less
- PAR ID:
- 10634565
- Publisher / Repository:
- American Geophysical Union
- Date Published:
- Journal Name:
- AGU Advances
- Volume:
- 5
- Issue:
- 6
- ISSN:
- 2576-604X
- Format(s):
- Medium: X
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Abstract Relative to their limited areal extent, riparian ecosystems are disproportionately important in regulating inorganic solute export from agricultural landscapes. We investigated spatial patterns of solute concentrations in surface and ground waters of stream corridors to infer the dominant hydrologic transport and biogeochemical pathways that influence riparian nitrate and sulfate processing from uplands to streams. We selected three reaches of stream corridors draining an agricultural landscape that vary in hydrologic connection with upland aquifers. Non‐irrigated crop production dominates land use in the study area and influences the quality of upland groundwater draining to the stream corridors. We interpret patterns in solute concentrations of riparian groundwater and stream water relative to upland groundwater to infer the influences of biogeochemical processing and hydrologic connectivity. Excess nitrate from cultivated soils is evident in upland groundwater concentrations that consistently exceed the U.S. Environmental Protection Agency public drinking water standard. Nitrate and oxygen concentrations in riparian groundwaters were consistently lower than in terrace groundwater and adjacent stream waters, suggesting rapid consumption of oxygen and influence of anaerobic metabolic reduction processes in subsurface flow. Sulfate concentrations in streams were higher than in terrace groundwater, likely due to weathering of shale‐derived substrate in riparian aquifers. The degree of solute mitigation or augmentation by riparian biogeochemical processes depended on the geomorphic context that controlled the fraction of upland water passing through the riparian substrate. Observed net nitrate losses with net sulfate gains from uplands to stream channels reflect flow paths through a complex distribution of redox conditions throughout the riparian areas, emphasizing the importance of considering riparian area heterogeneity in predicting solute export in streams. This research contributes to understanding how stream corridor substrate and geomorphic context controls the biogeochemical and hydrologic processes influencing the quality of water exported from agricultural landscapes.more » « less
-
Flow pulses mobilize particulate organic matter (POM) in streams from the surrounding landscape and streambed. This POM serves as a source of energy and nutrients, as well as a means for organismal dispersal, to downstream communities. In the barren terrestrial landscape of the McMurdo Dry Valleys (MDV) of Antarctica, benthic microbial mats occupying different in-stream habitat types are the dominant POM source in the many glacier-fed streams. Many of these streams experience daily flow peaks that mobilize POM, and diatoms recovered from underlying stream sediments suggest that mat-derived diatoms in the POM are retained there through hyporheic exchange. Yet, ‘how much’ and ‘when’ different in-stream habitat types contribute to POM diatom assemblages is unknown. To quantify the contribution of different in-stream habitat types to POM diatom assemblages, we collected time-integrated POM samples over four diel experiments, which spanned a gradient of flow conditions over three summers. Diatoms from POM samples were identified, quantified, and compared with dominant habitat types (i.e., benthic ‘orange’ mats, marginal ‘black’ mats, and bare sediments). Like bulk POM, diatom cell concentrations followed a clockwise hysteresis pattern with stream discharge over the daily flow cycles, indicating supply limitation. Diatom community analyses showed that different habitat types harbor distinct diatom communities, and mixing models revealed that a substantial proportion of POM diatoms originated from bare sediments during baseflow conditions. Meanwhile, orange and black mats contribute diatoms to POM primarily during daily flow peaks when both cell concentrations and discharge are highest, making mats the most important contributors to POM diatom assemblages at high flows. These observations may help explain the presence of mat-derived diatoms in hyporheic sediments. Our results thus indicate a varying importance of different in-stream habitats to POM generation and export on daily to seasonal timescales, with implications for biogeochemical cycling and the local diatom metacommunity.more » « less
-
null (Ed.)High concentrations of trace metal(loid)s exported from abandoned mine wastes and acid rock drainage pose a risk to the health of aquatic ecosystems. To determine if and when the hyporheic zone mediates metal(loid) export, we investigated the relationship between streamflow, groundwater–stream connectivity, and subsurface metal(loid) concentrations in two ~1-km stream reaches within the Bonita Peak Mining District, a US Environmental Protection Agency Superfund site located near Silverton, Colorado, USA. The hyporheic zones of reaches in two streams—Mineral Creek and Cement Creek—were characterized using a combination of salt-tracer injection tests, transient-storage modeling, and geochemical sampling of the shallow streambed (<0.7 m). Based on these data, we present two conceptual models for subsurface metal(loid) behavior in the hyporheic zones, including (1) well-connected systems characterized by strong hyporheic mixing of infiltrating stream water and upwelling groundwater and (2) poorly connected systems delineated by physical barriers that limit hyporheic mixing. The comparatively large hyporheic zone and high hydraulic conductivities of Mineral Creek created a connected stream–groundwater system, where mixing of oxygen-rich stream water and metal-rich groundwater facilitated the precipitation of metal colloids in the shallow subsurface. In Cement Creek, the precipitation of iron oxides at depth (~0.4 m) created a low-hydraulic-conductivity barrier between surface water and groundwater. Cemented iron oxides were an important regulator of metal(loid) concentrations in this poorly connected stream–groundwater system due to the formation of strong redox gradients induced by a relatively small hyporheic zone and high fluid residence times. A comparison of conceptual models to stream concentration–discharge relationships exhibited a clear link between geochemical processes occurring within the hyporheic zone of the well-connected system and export of particulate Al, Cu, Fe, and Mn, while the poorly connected system did not have a notable influence on metal concentration–discharge trends. Mineral Creek is an example of a hyporheic system that serves as a natural dissolved metal(loid) sink, whereas poorly connected systems such as Cement Creek may require a combination of subsurface remediation of sediments and mitigation of upstream, iron-rich mine drainages to reduce metal export.more » « less
-
Semrau, Jeremy D. (Ed.)Streams impacted by historic mining activity are characterized by acidic pH, unique microbial communities, and abundant metal-oxide precipitation, all of which can influence groundwater-surface water exchange. We investigate how metal-oxide precipitates and hyporheic mixing mediate the composition of microbial communities in two streams receiving acid-rock and mine drainage near Silverton, Colorado, USA. A large, neutral pH hyporheic zone facilitated the precipitation of metal particles/colloids in hyporheic porewaters. A small, low pH hyporheic zone, limited by the presence of a low-permeability, iron-oxyhydroxide layer known as ferricrete, led to the formation of steep geochemical gradients and high dissolved-metal concentrations. To determine how these two hyporheic systems influence microbiome composition, we installed well clusters and deployed in situ microcosms in each stream to sample porewaters and sediments for 16S rRNA gene sequencing. Results indicated that distinct hydrogeochemical conditions were present above and below the ferricrete in the low pH system. A positive feedback loop may be present in the low pH stream where microbially-mediated precipitation of iron-oxides contribute to additional clogging of hyporheic pore spaces, separating abundant, iron-oxidizing bacteria (Gallionella spp.) above the ferricrete from rare, low-abundance bacteria below the ferricrete. Metal precipitates and colloids that formed in the neutral pH hyporheic zone were associated with a more diverse phylogenetic community of nonmotile, nutrient-cycling bacteria that may be transported through hyporheic pore spaces. In summary, biogeochemical conditions influence, and are influenced by, hyporheic mixing, which mediates the distribution of micro-organisms and thus the cycling of metals in streams receiving acid-rock and mine drainage.more » « less
An official website of the United States government

