We consider the problem of sequential multiple hypothesis testing with nontrivial data collection costs. This problem appears, for example, when conducting biological experiments to identify differentially expressed genes of a disease process. This work builds on the generalized α-investing framework which enables control of the marginal false discovery rate in a sequential testing setting. We make a theoretical analysis of the long term asymptotic behavior of α-wealth which motivates a consideration of sample size in the α-investing decision rule. Posing the testing process as a game with nature, we construct a decision rule that optimizes the expected α-wealth reward (ERO) and provides an optimal sample size for each test. Empirical results show that a cost-aware ERO decision rule correctly rejects more false null hypotheses than other methods for $n=1$ where n is the sample size. When the sample size is not fixed cost-aware ERO uses a prior on the null hypothesis to adaptively allocate of the sample budget to each test. We extend cost-aware ERO investing to finite-horizon testing which enables the decision rule to allocate samples in a non-myopic manner. Finally, empirical tests on real data sets from biological experiments show that cost-aware ERO balances the allocation of samples to an individual test against the allocation of samples across multiple tests.
more »
« less
This content will become publicly available on February 13, 2026
Sequential stratified inference for the mean
We develop conservative tests for the mean of a bounded population under stratified sampling and apply them to risk-limiting post-election audits. The tests are "anytime valid" under sequential sampling, allowing optional stopping in each stratum. Our core method expresses a global hypothesis about the population mean as a union of intersection hypotheses describing within-stratum means. It tests each intersection hypothesis using independent test supermartingales (TSMs) combined across strata by multiplication. A P-value for each intersection hypothesis is the reciprocal of that test statistic, and the largest P-value in the union is a P-value for the global hypothesis. This approach has two primary moving parts: the rule selecting which stratum to draw from next given the sample so far, and the form of the TSM within each stratum. These rules may vary over intersection hypotheses. We construct the test with the smallest expected stopping time, and present a few strategies for approximating that optimum. Approximately optimal methods are challenging to compute when there are more than two strata, while some simple rules that scale well can be inconsistent -- the resulting test will never reject for some alternatives, no matter how large the sample. We present a set of rules that leads to a computationally tractable test for arbitrarily many strata. In instances that arise in auditing and other applications, its expected sample size is nearly optimal and substantially smaller than that of previous methods.
more »
« less
- Award ID(s):
- 2228884
- PAR ID:
- 10656298
- Publisher / Repository:
- ArXiV
- Date Published:
- Format(s):
- Medium: X
- Institution:
- ArXiV
- Sponsoring Org:
- National Science Foundation
More Like this
-
-
Abstract In a Monte Carlo test, the observed dataset is fixed, and several resampled or permuted versions of the dataset are generated in order to test a null hypothesis that the original dataset is exchangeable with the resampled/permuted ones. Sequential Monte Carlo tests aim to save computational resources by generating these additional datasets sequentially one by one and potentially stopping early. While earlier tests yield valid inference at a particular prespecified stopping rule, our work develops a new anytime-valid Monte Carlo test that can be continuously monitored, yielding a p-value or e-value at any stopping time possibly not specified in advance. It generalizes the well-known method by Besag and Clifford, allowing it to stop at any time, but also encompasses new sequential Monte Carlo tests that tend to stop sooner under the null and alternative without compromising power. The core technical advance is the development of new test martingales for testing exchangeability against a very particular alternative based on a testing by betting technique. The proposed betting strategies are guided by the derivation of a simple log-optimal betting strategy, have closed-form expressions for the wealth process, provable guarantees on resampling risk, and display excellent power in practice.more » « less
-
Accurate detection of infected individuals is one of the critical steps in stopping any pandemic. When the underlying infection rate of the disease is low, testing people in groups, instead of testing each individual in the population, can be more efficient. In this work, we consider noisy adaptive group testing design with specific test sensitivity and specificity that select the optimal group given previous test results based on pre-selected utility function. As in prior studies on group testing, we model this problem as a sequential Bayesian Optimal Experimental Design (BOED) to adaptively design the groups for each test. We analyze the required number of group tests when using the updated posterior on the infection status and the corresponding Mutual Information (MI) as our utility function for selecting new groups. More importantly, we study how the potential bias on the ground-truth noise of group tests may affect the group testing sample complexity.more » « less
-
In this paper, we study a sampling problem where a source takes samples from a Wiener process and transmits them through a wireless channel to a remote estimator. Due to channel fading, interference, and potential collisions, the packet transmissions are unreliable and could take random time durations. Our objective is to devise an optimal causal sampling policy that minimizes the long-term average mean square estimation error. This optimal sampling problem is a recursive optimal stopping problem, which is generally quite difficult to solve. However, we prove that the optimal sampling strategy is, in fact, a simple threshold policy where a new sample is taken whenever the instantaneous estimation error exceeds a threshold. This threshold remains a constant value that does not vary over time. By exploring the structure properties of the recursive optimal stopping problem, a low-complexity iterative algorithm is developed to compute the optimal threshold. This work generalizes previous research by incorporating both transmission errors and random transmission times into remote estimation. Numerical simulations are provided to compare our optimal policy with the zero-wait and age-optimal policies.more » « less
-
This paper studies inference in randomized controlled trials with covariate‐adaptive randomization when there are multiple treatments. More specifically, we study in this setting inference about the average effect of one or more treatments relative to other treatments or a control. As in Bugni, Canay, and Shaikh (2018), covariate‐adaptive randomization refers to randomization schemes that first stratify according to baseline covariates and then assign treatment status so as to achieve “balance” within each stratum. Importantly, in contrast to Bugni, Canay, and Shaikh (2018), we not only allow for multiple treatments, but further allow for the proportion of units being assigned to each of the treatments to vary across strata. We first study the properties of estimators derived from a “fully saturated” linear regression, that is, a linear regression of the outcome on all interactions between indicators for each of the treatments and indicators for each of the strata. We show that tests based on these estimators using the usual heteroskedasticity‐consistent estimator of the asymptotic variance are invalid in the sense that they may have limiting rejection probability under the null hypothesis strictly greater than the nominal level; on the other hand, tests based on these estimators and suitable estimators of the asymptotic variance that we provide are exact in the sense that they have limiting rejection probability under the null hypothesis equal to the nominal level. For the special case in which the target proportion of units being assigned to each of the treatments does not vary across strata, we additionally consider tests based on estimators derived from a linear regression with “strata fixed effects,” that is, a linear regression of the outcome on indicators for each of the treatments and indicators for each of the strata. We show that tests based on these estimators using the usual heteroskedasticity‐consistent estimator of the asymptotic variance are conservative in the sense that they have limiting rejection probability under the null hypothesis no greater than and typically strictly less than the nominal level, but tests based on these estimators and suitable estimators of the asymptotic variance that we provide are exact, thereby generalizing results in Bugni, Canay, and Shaikh (2018) for the case of a single treatment to multiple treatments. A simulation study and an empirical application illustrate the practical relevance of our theoretical results.more » « less
An official website of the United States government
