Search for: All records

Creators/Authors contains: "Ji, Rubao"

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Abstract Phytoplankton growth responds to temperature change through both thermal-trait-mediated effects on physiology and community composition and nutrient effects associated with stratification. The conventional view suggests that dominant nutrient effects lead to decreased productivity under warming. Here we integrate field data on the Northeast US Shelf with numerical models to constrain these two effects and identify the drivers of phytoplankton growth rate and net primary production variations in surface waters. Both model and data agree that thermal-trait-mediated effects outweigh nutrient effects, resulting in higher growth rates with increased temperature. Net primary production remains stable from winter to summer due to the compensatory effect of phytoplankton biomass reduction, offset by an elevated phytoplankton growth rate. Our findings provide quantitative evidence showing pronounced thermal-trait-mediated effects and reveal the importance of phytoplankton growth rate in modulating net primary production seasonality, offering valuable insights into the warming effects on phytoplankton dynamics across various spatiotemporal scales. 
    more » « less
    Free, publicly-accessible full text available May 16, 2027
  2. Free, publicly-accessible full text available December 1, 2026
  3. Abstract Measurements by the submersible ultraviolet nitrate analyzer (SUNA) can be used to derive high‐resolution in situ nitrate concentration with reliable accuracy and precision. Here we report our operational practices for SUNA deployment (including pre‐cruise instrument preparation and in‐cruise instrument maintenance) and detailed post‐cruise nitrate quality control procedures for SUNA integrated onto the CTD rosette. This work is based on experiences and findings from over 500 individual SUNA casts collected from 24 cruises (of which 14 cruises have been quality controlled so far) over the past 5 yr. After applying previously published spectral corrections for temperature, salinity, and pressure effects, we found residual biases in SUNA nitrate estimates compared to independently measured discrete samples. We further develop and assess a new two‐step procedure to remove remaining biases: (1) a general temperature‐dependent adjustment at low‐nitrate concentrations; and (2) a cruise‐specific full‐range bias correction. Our final quality‐controlled SUNA nitrate data achieve an accuracy of 0.34–0.78 μM, with a precision of 0.08–0.21 μM, at a vertical resolution of 1 m. Additional comparisons between the nitrate and density data confirm the high quality of the quality‐controlled SUNA data. Although applying spectral correction algorithms increases the accuracy and precision of the instrument‐output nitrate concentration, we emphasize that additional constraints of SUNA measurements against other independent sources (e.g., bottle data, temperature, and density) are irreplaceable to ensure the accuracy of final nitrate data. 
    more » « less
  4. Abstract The timing of biological events, known as phenology, plays a key role in shaping ecosystem dynamics, and climate change can significantly alter these timings. The Gulf of Maine on the Northeast U.S. Shelf is vulnerable to warming temperatures and other climate impacts, which could affect the distribution and production of plankton species sensitive to phenological shifts. In this study, we apply a novel data‐driven modeling approach to long‐term datasets to understand the population variability ofCalanus finmarchicus, a lipid‐rich copepod that is fundamental to the Gulf of Maine food web. Our results reveal how phenology impacts the complex intermingling of top‐down and bottom‐up controls. We find that early initiation of the annual phytoplankton bloom prompts an early start to the reproductive season for populations ofC. finmarchicusin the inner Gulf of Maine, resulting in high spring abundance. This spring condition appears to be conducive to enhanced predation pressure later in the season, consequently resulting in overall lowC. finmarchicusabundance in the fall. These biologically controlled dynamics are less pronounced in the outer Gulf of Maine, where water exchanges near the boundary have a greater influence. Our analysis augments existing hypotheses in fisheries oceanography and classical ecological theory by considering unique plankton life‐history characteristics and shelf sea dynamics, offering new insights into the biological factors drivingC. finmarchicusvariability. 
    more » « less
  5. Abstract In aquatic ecosystems, allochthonous nutrient transport to the euphotic zone is an important process that fuels new production. Here, we use high‐resolution physical and biogeochemical observations from five summers to estimate the mean vertical nitrate flux, and thus new production over the Northeast U.S. Shelf (NES). We find that the summertime nitrate field is primarily controlled by biological uptake and physical advection–diffusion processes, above and below the 1% light level depth, respectively. We estimate the vertical nitrate flux to be 8.2 ± 5.3 × 10−6 mmol N m−2 s−1for the mid‐shelf and 12.6 ± 8.6 × 10−6 mmol N m−2 s−1for the outer shelf. Furthermore, we show that the new production to total primary production ratio (i.e., the f‐ratio), consistently ranges between 10% and 15% under summer conditions on the NES. Two independent approaches—nitrate flux‐based new production and O2/Ar‐based net community production—corroborate the robustness of the f‐ratio estimation. Since ~ 85% of the total primary production is fueled by recycled nutrients over sufficiently broad spatial and temporal scales, less than 15% of the organic matter produced in summer is available for export from the NES euphotic zone. Our direct quantification of new production not only provides more precise details about key processes for NES food webs and ecosystem function, but also demonstrates the potential of this approach to be applied to other similar datasets to understand nutrient and carbon cycling in the global ocean. 
    more » « less
  6. Abstract Spatial population synchrony, defined as spatial covariation in population density fluctuations, exists across different temporal and spatial scales. Determining the degree of spatial synchrony is useful for inferring environmental drivers of population variability in the wake of climate change. In this study, we applied novel statistical methods to detect spatial synchrony patterns ofCalanus finmarchicuson the Northeast U.S. Shelf at multiple spatiotemporal scales using unevenly distributed data. Our results reveal thatC. finmarchicussubpopulations connected by advection are not necessarily in synchrony, indicating that the degree of synchrony is likely influenced by heterogeneity of local habitats. In addition, regionally synchronous environmental conditions (e.g., sea surface temperature) may not play as significant a role in influencing subregional population dynamics as was previously hypothesized. Overlooking the spatial heterogeneity of synchronous patterns at different time scales could lead to erroneous inferences of potential environmental drivers responsible forC. finmarchicusvariability. 
    more » « less
  7. Abstract This is Part II of a study examining wintertime destratification in Antarctic coastal polynyas, focusing on providing a qualitative description of the influence of ice tongues and headlands, both common geometric features neighboring the polynyas. The model of a coastal polynya used in Part I is modified to include an ice tongue and a headland to investigate their impacts on the dispersal of water formed at the polynya surface, which is referred to as Polynya Source Water (PSW) here. The model configuration qualitatively represents the settings of some coastal polynyas, such as the Terra Nova Bay Polynya. The simulations highlight that an ice tongue next to a polynya tends to break the alongshore symmetry in the lateral return flows toward the polynya, creating a stagnant region in the corner between the ice tongue and polynya where outflow of the PSW in the water column is suppressed. This enhances sinking of the PSW and accelerates destratification of the polynya water column. Adding a headland to the other side of the polynya tends to restore the alongshore symmetry in the lateral return flows, which increases the offshore PSW transport and slows down destratification in the polynya. This work stresses the importance of resolving small-scale geometric features in simulating vertical mixing in the polynya. It provides a framework to explain spatial and temporal variability in rates of destratification and Dense Shelf Water formation across Antarctic coastal polynyas, and helps understand why some polynyas are sources of Antarctic Bottom Water while others are not. 
    more » « less
  8. Abstract This study examines the process of water-column stratification breakdown in Antarctic coastal polynyas adjacent to an ice shelf with a cavity underneath. This first part of a two-part sequence seeks to quantify the influence of offshore katabatic winds, alongshore winds, air temperature, and initial ambient stratification on the time scales of polynya destratification through combining process-oriented numerical simulations and analytical scaling. In particular, the often-neglected influence of wind-driven circulation on the lateral transport of the water formed at the polynya surface—which we call Polynya Source Water (PSW)—is systematically examined here. First, an ice shelf–sea ice–ocean coupled numerical model is adapted to simulate the process of PSW formation in polynyas of various configurations. The simulations highlight that (i) before reaching the bottom, majority of the PSW is actually carried away from the polynya by katabatic wind–induced offshore outflow, diminishing water-column mixing in the polynya and intrusion of the PSW into the neighboring ice shelf cavity, and (ii) alongshore coastal easterly winds, through inducing onshore Ekman transport, reduce offshore loss of the PSW and enhance polynya mixing and PSW intrusion into the cavity. Second, an analytical scaling of the destratification time scale is derived based on fundamental physical principles to quantitatively synthesize the influence of the physical factors, which is then verified by independent numerical sensitivity simulations. This work provides insights into the mechanisms that drive temporal and cross-polynya variations in stratification and PSW formation in Antarctic coastal polynyas, and establishes a framework for studying differences among the polynyas in the ocean. 
    more » « less
  9. Abstract A long‐standing hypothesis postulates that the elevated productivity at continental shelf break regions is stimulated by enhanced nutrient supply to the surface sunlit depths, however, direct, quantitative evidence has been lacking. We tested this hypothesis with a set of high‐resolution physical and biogeochemical observations from repeated summertime surveys across the Northeast U.S. continental shelf break front. We found direct evidence during summer at this shelf break frontal region that: (a) near‐bottom flow convergence, a necessary process leading to frontal upwelling, was a common occurrence, happening over 75% of the time; (b) nitrate concentrations were elevated, characterized by a dome‐shaped cross‐shelf distribution approximately 30 m tall, extending from the foot of the shelf break front up to the base of the euphotic layer; (c) subsurface chlorophyll enhancement was a persistent feature. Together, these findings link bottom flow convergence, nutrient upwelling, and phytoplankton enhancement, elucidating the shelf break frontal upwelling dynamics. 
    more » « less