Search for: All records

Creators/Authors contains: "Yang, Jian"

Note: When clicking on a Digital Object Identifier (DOI) number, you will be taken to an external site maintained by the publisher. Some full text articles may not yet be available without a charge during the embargo (administrative interval).
What is a DOI Number?

Some links on this page may take you to non-federal websites. Their policies may differ from this site.

  1. Free, publicly-accessible full text available December 1, 2027
  2. Alkan, Can (Ed.)
    Abstract SummaryWith the rapid development of long-read sequencing technologies, the era of individual complete genomes is approaching. We have developed wgatools, a cross-platform, ultrafast toolkit that supports a range of whole-genome alignment formats, offering practical tools for conversion, processing, evaluation, and visualization of alignments, thereby facilitating population-level genome analysis and advancing functional and evolutionary genomics. Availability and implementationwgatools supports diverse formats and can process, filter, and statistically evaluate alignments, perform alignment-based variant calling, and visualize alignments both locally and genome-wide. Built with Rust for efficiency and safe memory usage, it ensures fast performance and can handle large datasets consisting of hundreds of genomes. wgatools is published as free software under the MIT open-source license, and its source code is freely available at https://github.com/wjwei-handsome/wgatools and https://zenodo.org/records/14882797. 
    more » « less
  3. Integrating thermoreversibility with electrical conductivity in a unified hydrogel platform enables long-term, reusable through-hair neural interfaces. However, achieving both simultaneously remains challenging, as thermoreversibility demands network reorganization while conductivity necessitates network percolation. Here, we engineer phase morphology by controlling the components’ viscoelastic state during mixing. Ionically conductive nucleated morphologies illustrated by liquid-liquid phase separation exhibit rapid thermoreversibility, whereas electrically conductive bicontinuous phases demonstrated by viscoelastic phase separation achieve a marginal gel-sol transition and an ultralow storage modulus of ~1.7 kilopascals while simultaneously achieving a conductivity of 7.5 siemens per centimeter or transconductance of 5.1 millisiemens in an organic electrochemical transistor. Below this threshold, systems resemble nucleated behavior, whereas above it, superior semiconducting properties emerge, but phase transition capability is lost. These materials enable reusable through-hair neural interfaces to maintain low skin contact impedance of 1.6 kohm·cm2across different hair types for 3 days, facilitating stable event-related desynchronization detection during mechanical and electrical haptic sensation for personalized haptics. 
    more » « less
    Free, publicly-accessible full text available May 15, 2027
  4. Free, publicly-accessible full text available November 1, 2026
  5. Mounting concerns regarding per‐/poly‐fluoroalkyl substances (PFAS) on human health are focusing attention on trace‐level PFAS detection in aqueous environments. Here, we report a readily prepared small molecule, 2,6‐bis(3,5‐diethyl‐1H‐pyrrol‐2‐yl)pyridine (receptor 1), that displays high binding affinities (logKa< = 4.9–6.2) and produces a strong “turn‐on” emission response when exposed to representative PFAS in hexanes. The hydrophobic nature of 1 , and its strong affinity for various PFAS, allowed hexanes solutions of 1 to be used as “turn‐on” emission sensors for dilute aqueous solutions of long‐chain (≥C8) PFAS under acidic conditions (pH 2) by liquid‐phase extraction (LPE). In the case of perfluorooctanoic acid (PFOA), the response was rapid (under 10 min) and sensitive. Limits of detection (LOD) as low as 250 ppt were readily achievable by direct naked‐eye observation. LOD as low as 40 and 100 ppt, respectively, could be reached for deionized and tap water solutions of PFOA using a smartphone color‐scanning application. Little change in the sensitivity was seen in the presence of a range of inorganic and organic species that could act as potential interferants. Support for the present findings came from UV–vis absorbance, fluorescence, 1 
    more » « less
  6. Abstract We investigate a data‐driven dynamic inventory control problem involving fixed setup costs and lost sales. Random demand arrivals stem from a demand distribution that is only known to come out of a vast ambiguity set. Lost sales and demand ambiguity would together complicate the problem through censoring, namely, the inability of the firm to observe the lost portion of the demand data. Our main policy idea advocates periodically ordering up to high levels for learning purposes and, in intervening periods, cleverly exploiting the information gained in learning periods. By regret, we mean the price paid for ambiguity in long‐run average performances. When demand has a finite support, we can accomplish a regret bound in the order of which almost matches a known lower bound as long as inventory costs are genuinely convex. Major policy adjustments are warranted for the more complex case involving an unbounded demand support. The resulting regret could range between and depending on the nature of moment‐related bounds that help characterize the degree of ambiguity. These are improvable to when distributions are light‐tailed. Our simulation demonstrates the merits of various policy ideas. 
    more » « less
  7. Untethered electrical stimulation or pacing of the heart is of critical importance in addressing the pressing needs of cardiovascular diseases in both clinical therapies and fundamental studies. Among various stimulation methods, light illumination–induced electrical stimulation via photoelectric effect without any genetic modifications to beating cells/tissues or whole heart has profound benefits. However, a critical bottleneck lies in the lack of a suitable material with tissue-like mechanical softness and deformability and sufficient optoelectronic performances toward effective stimulation. Here, we introduce an ultrathin (<500 nm), stretchy, and self-adhesive rubbery bio-optoelectronic stimulator (RBOES) in a bilayer construct of a rubbery semiconducting nanofilm and a transparent, stretchable gold nanomesh conductor. The RBOES could maintain its optoelectronic performance when it was stretched by 20%. The RBOES was validated to effectively accelerate the beating of the human induced pluripotent stem cell–derived cardiomyocytes. Furthermore, acceleration of ex vivo perfused rat hearts by optoelectronic stimulation with the self-adhered RBOES was achieved with repetitive pulsed light illumination. 
    more » « less